RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 PRDX5P30044 214 aa24.82■■□□□ 1.56
CASC3-203ENST00000418132 SGIP1Q9BQI5 828 aa24.82■■□□□ 1.56
CASC3-203ENST00000418132 A0A0G2JLW4 131 aa24.81■■□□□ 1.56
CASC3-203ENST00000418132 RIMBP2O15034 1052 aa24.81■■□□□ 1.56
CASC3-203ENST00000418132 MBD4O95243 580 aa24.81■■□□□ 1.56
CASC3-203ENST00000418132 TGFB2P61812 414 aa24.81■■□□□ 1.56
CASC3-203ENST00000418132 NAA16Q6N069 864 aaPredicted RBP24.81■■□□□ 1.56
CASC3-203ENST00000418132 ADGRA1Q86SQ6 560 aa24.81■■□□□ 1.56
CASC3-203ENST00000418132 CTNNA3Q9UI47 895 aa24.81■■□□□ 1.56
CASC3-203ENST00000418132 JAG2Q9Y219 1238 aa24.81■■□□□ 1.56
CASC3-203ENST00000418132 TAF6LQ9Y6J9 622 aa24.81■■□□□ 1.56
CASC3-203ENST00000418132 MECOMQ03112 1051 aa24.8■■□□□ 1.56
CASC3-203ENST00000418132 JAKMIP1Q96N16 626 aaKnown RBP24.8■■□□□ 1.56
CASC3-203ENST00000418132 ZSWIM6Q9HCJ5 1215 aa24.8■■□□□ 1.56
CASC3-203ENST00000418132 KRT32Q14532 448 aa24.8■■□□□ 1.56
CASC3-203ENST00000418132 FAM205AQ6ZU69 1335 aa24.79■■□□□ 1.56
CASC3-203ENST00000418132 PSDA5PKW4 1024 aaPredicted RBP24.79■■□□□ 1.56
CASC3-203ENST00000418132 FGAP02671 866 aa24.79■■□□□ 1.56
CASC3-203ENST00000418132 CASTP20810 708 aaKnown RBP24.79■■□□□ 1.56
CASC3-203ENST00000418132 ZNF219Q9P2Y4 722 aaPredicted RBP24.79■■□□□ 1.56
CASC3-203ENST00000418132 CHD4Q14839 1912 aa24.79■■□□□ 1.56
CASC3-203ENST00000418132 PSMA5P28066 241 aa24.78■■□□□ 1.56
CASC3-203ENST00000418132 GRIPAP1Q4V328 841 aa24.78■■□□□ 1.56
CASC3-203ENST00000418132 ARMT1Q9H993 441 aa24.78■■□□□ 1.56
CASC3-203ENST00000418132 LDHBP07195 334 aaKnown RBP24.78■■□□□ 1.56
CASC3-203ENST00000418132 GNAT2P19087 354 aa24.78■■□□□ 1.56
CASC3-203ENST00000418132 MCM2P49736 904 aa24.78■■□□□ 1.56
CASC3-203ENST00000418132 LCORLQ8N3X6 602 aa24.78■■□□□ 1.56
CASC3-203ENST00000418132 TTC14Q96N46 770 aa24.78■■□□□ 1.56
CASC3-203ENST00000418132 PATL2C9JE40 543 aaKnown RBP24.77■■□□□ 1.56
CASC3-203ENST00000418132 ALX1Q15699 326 aa24.77■■□□□ 1.56
CASC3-203ENST00000418132 MIGA1Q8NAN2 632 aa24.77■■□□□ 1.56
CASC3-203ENST00000418132 RIOK1Q9BRS2 568 aaKnown RBP24.77■■□□□ 1.56
CASC3-203ENST00000418132 MAGEB6P1A0A0J9YX57 407 aa24.76■■□□□ 1.55
CASC3-203ENST00000418132 C21orf2O43822 256 aa24.76■■□□□ 1.55
CASC3-203ENST00000418132 TTLL5Q6EMB2 1281 aa24.76■■□□□ 1.55
CASC3-203ENST00000418132 TBC1D22AQ8WUA7 517 aa24.76■■□□□ 1.55
CASC3-203ENST00000418132 CYP46A1Q9Y6A2 500 aa24.76■■□□□ 1.55
CASC3-203ENST00000418132 ZMYM6O95789 1325 aa24.76■■□□□ 1.55
CASC3-203ENST00000418132 RUFY3Q7L099 469 aa24.76■■□□□ 1.55
CASC3-203ENST00000418132 DZIP1Q86YF9 867 aaKnown RBP24.75■■□□□ 1.55
CASC3-203ENST00000418132 PTGER2P43116 358 aa24.74■■□□□ 1.55
CASC3-203ENST00000418132 IMMTQ16891 758 aaKnown RBP24.74■■□□□ 1.55
CASC3-203ENST00000418132 SUPT20HQ8NEM7 779 aa24.74■■□□□ 1.55
CASC3-203ENST00000418132 GSG1L2A8MUP6 293 aa24.74■■□□□ 1.55
CASC3-203ENST00000418132 APPP05067 770 aa24.74■■□□□ 1.55
CASC3-203ENST00000418132 CPA1P15085 419 aa24.74■■□□□ 1.55
CASC3-203ENST00000418132 GRIK5Q16478 980 aa24.74■■□□□ 1.55
CASC3-203ENST00000418132 DOK7Q18PE1 504 aa24.74■■□□□ 1.55
CASC3-203ENST00000418132 CCDC93Q567U6 631 aa24.74■■□□□ 1.55
CASC3-203ENST00000418132 BLOC1S2Q6QNY1 142 aa24.74■■□□□ 1.55
CASC3-203ENST00000418132 PIM2Q9P1W9 311 aa24.74■■□□□ 1.55
CASC3-203ENST00000418132 GTF2IP78347 998 aa24.73■■□□□ 1.55
CASC3-203ENST00000418132 MFSD14BQ5SR56 506 aa24.73■■□□□ 1.55
CASC3-203ENST00000418132 STOX1Q6ZVD7 989 aa24.73■■□□□ 1.55
CASC3-203ENST00000418132 PODNQ7Z5L7 613 aa24.73■■□□□ 1.55
CASC3-203ENST00000418132 IFNL3Q8IZI9 196 aa24.73■■□□□ 1.55
CASC3-203ENST00000418132 NEK1Q96PY6 1258 aa24.73■■□□□ 1.55
CASC3-203ENST00000418132 EPB41L4AQ9HCS5 686 aaPredicted RBP24.73■■□□□ 1.55
CASC3-203ENST00000418132 SLC4A4Q9Y6R1 1079 aa24.73■■□□□ 1.55
CASC3-203ENST00000418132 BRCA1P38398 1863 aaKnown RBP24.73■■□□□ 1.55
CASC3-203ENST00000418132 GSTO1P78417 241 aa24.73■■□□□ 1.55
CASC3-203ENST00000418132 RTKN2Q8IZC4 609 aa24.73■■□□□ 1.55
CASC3-203ENST00000418132 CD2APQ9Y5K6 639 aa24.73■■□□□ 1.55
CASC3-203ENST00000418132 LAMA4Q16363 1823 aa24.72■■□□□ 1.55
CASC3-203ENST00000418132 G3V3G9 751 aa24.72■■□□□ 1.55
CASC3-203ENST00000418132 PRKAB2O43741 272 aa24.72■■□□□ 1.55
CASC3-203ENST00000418132 KIAA2012Q0VF49 1180 aa24.72■■□□□ 1.55
CASC3-203ENST00000418132 COL9A3Q14050 684 aaPredicted RBP24.72■■□□□ 1.55
CASC3-203ENST00000418132 DCAF8Q5TAQ9 597 aa24.72■■□□□ 1.55
CASC3-203ENST00000418132 PDRG1Q9NUG6 133 aa24.72■■□□□ 1.55
CASC3-203ENST00000418132 E7EWF7 191 aa24.71■■□□□ 1.55
CASC3-203ENST00000418132 RPS6KB1P23443 525 aa24.71■■□□□ 1.55
CASC3-203ENST00000418132 DYNLL1P63167 89 aaKnown RBP24.71■■□□□ 1.55
CASC3-203ENST00000418132 ZNF213O14771 459 aa24.71■■□□□ 1.55
CASC3-203ENST00000418132 AK2P54819 239 aa24.71■■□□□ 1.55
CASC3-203ENST00000418132 PSMD1Q99460 953 aa24.71■■□□□ 1.55
CASC3-203ENST00000418132 NACAP1Q9BZK3 213 aa24.71■■□□□ 1.55
CASC3-203ENST00000418132 ALDH8A1Q9H2A2 487 aaPredicted RBP24.71■■□□□ 1.55
CASC3-203ENST00000418132 SUGT1Q9Y2Z0 365 aa24.71■■□□□ 1.55
CASC3-203ENST00000418132 NAPBQ9H115 298 aa24.7■■□□□ 1.54
CASC3-203ENST00000418132 DBNDD1Q9H9R9 158 aa24.7■■□□□ 1.54
CASC3-203ENST00000418132 LDHCP07864 332 aa24.69■■□□□ 1.54
CASC3-203ENST00000418132 HMGB1P09429 215 aaKnown RBP24.69■■□□□ 1.54
CASC3-203ENST00000418132 HAND2P61296 217 aa24.69■■□□□ 1.54
CASC3-203ENST00000418132 SOGA3Q5TF21 947 aa24.69■■□□□ 1.54
CASC3-203ENST00000418132 SPRYD3Q8NCJ5 442 aa24.69■■□□□ 1.54
CASC3-203ENST00000418132 TMX3Q96JJ7 454 aa24.69■■□□□ 1.54
CASC3-203ENST00000418132 AATFQ9NY61 560 aaKnown RBP eCLIP24.69■■□□□ 1.54
CASC3-203ENST00000418132 MYH2Q9UKX2 1941 aa24.68■■□□□ 1.54
CASC3-203ENST00000418132 DIXDC1Q155Q3 683 aa24.68■■□□□ 1.54
CASC3-203ENST00000418132 AOC3Q16853 763 aa24.68■■□□□ 1.54
CASC3-203ENST00000418132 MROH7-TTC4A0A0A0MT08 1334 aa24.67■■□□□ 1.54
CASC3-203ENST00000418132 ECE2O60344 883 aa24.67■■□□□ 1.54
CASC3-203ENST00000418132 SDR42E1Q8WUS8 393 aa24.67■■□□□ 1.54
CASC3-203ENST00000418132 FAM163AQ96GL9 167 aaPredicted RBP24.67■■□□□ 1.54
CASC3-203ENST00000418132 NBPF3Q9H094 633 aa24.67■■□□□ 1.54
CASC3-203ENST00000418132 PPP4CP60510 307 aa24.67■■□□□ 1.54
CASC3-203ENST00000418132 DALRD3Q5D0E6 543 aaKnown RBP24.67■■□□□ 1.54
CASC3-203ENST00000418132 CERS5Q8N5B7 392 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms