RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 CALML4Q96GE6 196 aa17.83■□□□□ 0.45
PHRF1-203ENST00000416188 TCERG1LQ5VWI1 586 aa17.83■□□□□ 0.44
PHRF1-203ENST00000416188 DBNDD2Q9BQY9 259 aa17.83■□□□□ 0.44
PHRF1-203ENST00000416188 PRDM10Q9NQV6 1147 aa17.83■□□□□ 0.44
PHRF1-203ENST00000416188 AATKQ6ZMQ8 1374 aa17.83■□□□□ 0.44
PHRF1-203ENST00000416188 USP48Q86UV5 1035 aa17.83■□□□□ 0.44
PHRF1-203ENST00000416188 PLCD4Q9BRC7 762 aa17.83■□□□□ 0.44
PHRF1-203ENST00000416188 NEURL1BA8MQ27 555 aa17.83■□□□□ 0.44
PHRF1-203ENST00000416188 MMP10P09238 476 aa17.83■□□□□ 0.44
PHRF1-203ENST00000416188 NBPF7P0C2Y1 421 aaPredicted RBP17.83■□□□□ 0.44
PHRF1-203ENST00000416188 DALRD3Q5D0E6 543 aaKnown RBP17.83■□□□□ 0.44
PHRF1-203ENST00000416188 LUZP1Q86V48 1076 aa17.83■□□□□ 0.44
PHRF1-203ENST00000416188 USO1O60763 962 aaKnown RBP17.82■□□□□ 0.44
PHRF1-203ENST00000416188 AATFQ9NY61 560 aaKnown RBP eCLIP17.82■□□□□ 0.444e-7■■■■■ 34.9
PHRF1-203ENST00000416188 SPDYE3A6NKU9 549 aa17.82■□□□□ 0.44
PHRF1-203ENST00000416188 CA8P35219 290 aa17.82■□□□□ 0.44
PHRF1-203ENST00000416188 CERS3Q8IU89 383 aa17.82■□□□□ 0.44
PHRF1-203ENST00000416188 ZBTB38Q8NAP3 1195 aaPredicted RBP17.82■□□□□ 0.44
PHRF1-203ENST00000416188 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.82■□□□□ 0.44
PHRF1-203ENST00000416188 PPEF1O14829 653 aaPredicted RBP17.82■□□□□ 0.44
PHRF1-203ENST00000416188 NEBLO76041 1014 aa17.82■□□□□ 0.44
PHRF1-203ENST00000416188 EN1Q05925 392 aaPredicted RBP17.82■□□□□ 0.44
PHRF1-203ENST00000416188 TEKT1Q969V4 418 aa17.82■□□□□ 0.44
PHRF1-203ENST00000416188 ZSCAN16Q9H4T2 348 aaPredicted RBP17.82■□□□□ 0.44
PHRF1-203ENST00000416188 IGSF1Q8N6C5 1336 aa17.82■□□□□ 0.44
PHRF1-203ENST00000416188 GSDMDP57764 484 aa17.82■□□□□ 0.44
PHRF1-203ENST00000416188 PTPRMP28827 1452 aa17.82■□□□□ 0.44
PHRF1-203ENST00000416188 TNS3Q68CZ2 1445 aa17.81■□□□□ 0.44
PHRF1-203ENST00000416188 KIAA0825Q8IV33 1275 aa17.81■□□□□ 0.44
PHRF1-203ENST00000416188 RRP36Q96EU6 259 aaKnown RBP17.81■□□□□ 0.44
PHRF1-203ENST00000416188 NEMFO60524 1076 aa17.81■□□□□ 0.44
PHRF1-203ENST00000416188 PAFAH1B1P43034 410 aa17.81■□□□□ 0.44
PHRF1-203ENST00000416188 CCDC40Q4G0X9 1142 aa17.81■□□□□ 0.44
PHRF1-203ENST00000416188 SHROOM2Q13796 1616 aa17.81■□□□□ 0.44
PHRF1-203ENST00000416188 AMPD3Q01432 767 aa17.81■□□□□ 0.44
PHRF1-203ENST00000416188 ZSCAN23Q3MJ62 389 aa17.81■□□□□ 0.44
PHRF1-203ENST00000416188 SMCR8Q8TEV9 937 aaPredicted RBP17.81■□□□□ 0.44
PHRF1-203ENST00000416188 RLBP1P12271 317 aa17.8■□□□□ 0.44
PHRF1-203ENST00000416188 KIF1BO60333 1816 aa17.8■□□□□ 0.44
PHRF1-203ENST00000416188 CALM1P0DP23 149 aa17.8■□□□□ 0.44
PHRF1-203ENST00000416188 CALM2P0DP24 149 aa17.8■□□□□ 0.44
PHRF1-203ENST00000416188 CALM3P0DP25 149 aa17.8■□□□□ 0.44
PHRF1-203ENST00000416188 CCDC113Q9H0I3 377 aa17.8■□□□□ 0.44
PHRF1-203ENST00000416188 MACROD2A1Z1Q3 448 aa17.8■□□□□ 0.44
PHRF1-203ENST00000416188 PRC1O43663 620 aa17.8■□□□□ 0.44
PHRF1-203ENST00000416188 GBP2P32456 591 aaPredicted RBP17.8■□□□□ 0.44
PHRF1-203ENST00000416188 DCTPP1Q9H773 170 aa17.8■□□□□ 0.44
PHRF1-203ENST00000416188 ARMT1Q9H993 441 aa17.8■□□□□ 0.44
PHRF1-203ENST00000416188 CNPY2Q9Y2B0 182 aa17.8■□□□□ 0.44
PHRF1-203ENST00000416188 ERMNQ8TAM6 284 aa17.8■□□□□ 0.44
PHRF1-203ENST00000416188 PCCAP05165 728 aaPredicted RBP17.79■□□□□ 0.44
PHRF1-203ENST00000416188 ALG1Q9BT22 464 aa17.79■□□□□ 0.44
PHRF1-203ENST00000416188 SRP68Q9UHB9 627 aaKnown RBP17.79■□□□□ 0.44
PHRF1-203ENST00000416188 ABCA9Q8IUA7 1624 aa17.79■□□□□ 0.44
PHRF1-203ENST00000416188 SYKP43405 635 aa17.79■□□□□ 0.44
PHRF1-203ENST00000416188 RBM25P49756 843 aaKnown RBP17.79■□□□□ 0.44
PHRF1-203ENST00000416188 PSDA5PKW4 1024 aaPredicted RBP17.79■□□□□ 0.44
PHRF1-203ENST00000416188 IRX3P78415 501 aaPredicted RBP17.79■□□□□ 0.44
PHRF1-203ENST00000416188 USP40Q9NVE5 1235 aa17.79■□□□□ 0.44
PHRF1-203ENST00000416188 EZRP15311 586 aaKnown RBP17.79■□□□□ 0.44
PHRF1-203ENST00000416188 SPATA5Q8NB90 893 aa17.79■□□□□ 0.44
PHRF1-203ENST00000416188 CBX1P83916 185 aa17.78■□□□□ 0.44
PHRF1-203ENST00000416188 GIGYF2Q6Y7W6 1299 aaKnown RBP17.78■□□□□ 0.44
PHRF1-203ENST00000416188 USP8P40818 1118 aa17.78■□□□□ 0.44
PHRF1-203ENST00000416188 MAP9Q49MG5 647 aa17.78■□□□□ 0.44
PHRF1-203ENST00000416188 KANK3Q6NY19 840 aa17.78■□□□□ 0.44
PHRF1-203ENST00000416188 C6orf50Q9HD87 102 aa17.78■□□□□ 0.44
PHRF1-203ENST00000416188 RTL9Q8NET4 1388 aa17.78■□□□□ 0.44
PHRF1-203ENST00000416188 TET3O43151 1660 aa17.78■□□□□ 0.44
PHRF1-203ENST00000416188 ANAPC15P60006 121 aa17.78■□□□□ 0.44
PHRF1-203ENST00000416188 Q6ZUG5 572 aa17.78■□□□□ 0.44
PHRF1-203ENST00000416188 MAPKAPK5Q8IW41 473 aa17.78■□□□□ 0.44
PHRF1-203ENST00000416188 CCDC93Q567U6 631 aa17.77■□□□□ 0.44
PHRF1-203ENST00000416188 GSTTP1A0A1W2PQM5 241 aa17.77■□□□□ 0.44
PHRF1-203ENST00000416188 KIF24Q5T7B8 1368 aa17.77■□□□□ 0.44
PHRF1-203ENST00000416188 KDM5AP29375 1690 aaKnown RBP17.77■□□□□ 0.44
PHRF1-203ENST00000416188 CTNNBL1Q8WYA6 563 aaPredicted RBP17.77■□□□□ 0.44
PHRF1-203ENST00000416188 N4BP3O15049 544 aa17.77■□□□□ 0.43
PHRF1-203ENST00000416188 CAVIN2O95810 425 aa17.77■□□□□ 0.43
PHRF1-203ENST00000416188 HSP90AA4PQ58FG1 418 aa17.77■□□□□ 0.43
PHRF1-203ENST00000416188 CCDC171Q6TFL3 1326 aa17.77■□□□□ 0.43
PHRF1-203ENST00000416188 PARP1P09874 1014 aaKnown RBP17.76■□□□□ 0.43
PHRF1-203ENST00000416188 SCNN1DP51172 638 aa17.76■□□□□ 0.43
PHRF1-203ENST00000416188 CCDC150Q8NCX0 1101 aa17.76■□□□□ 0.43
PHRF1-203ENST00000416188 DYDC1Q8WWB3 177 aa17.76■□□□□ 0.43
PHRF1-203ENST00000416188 DRC1Q96MC2 740 aa17.76■□□□□ 0.43
PHRF1-203ENST00000416188 XRCC6P12956 609 aaKnown RBP eCLIP17.76■□□□□ 0.43
PHRF1-203ENST00000416188 AFMP43652 599 aa17.76■□□□□ 0.43
PHRF1-203ENST00000416188 CETN1Q12798 172 aa17.76■□□□□ 0.43
PHRF1-203ENST00000416188 DCAF15Q66K64 600 aa17.76■□□□□ 0.43
PHRF1-203ENST00000416188 TTLL6Q8N841 843 aa17.76■□□□□ 0.43
PHRF1-203ENST00000416188 NOD1Q9Y239 953 aa17.76■□□□□ 0.43
PHRF1-203ENST00000416188 SYNMO15061 1565 aa17.76■□□□□ 0.43
PHRF1-203ENST00000416188 BRDTQ58F21 947 aaPredicted RBP17.76■□□□□ 0.43
PHRF1-203ENST00000416188 LRSAM1Q6UWE0 723 aa17.76■□□□□ 0.43
PHRF1-203ENST00000416188 BICD1Q96G01 975 aa17.76■□□□□ 0.43
PHRF1-203ENST00000416188 GPCPD1Q9NPB8 672 aa17.76■□□□□ 0.43
PHRF1-203ENST00000416188 GYG1P46976 350 aa17.76■□□□□ 0.43
PHRF1-203ENST00000416188 SP4Q02446 784 aa17.76■□□□□ 0.43
PHRF1-203ENST00000416188 STXBP4Q6ZWJ1 553 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms