RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 TPD52L1Q16890 204 aaPredicted RBP23.67■■□□□ 1.38
AP1S3-205ENST00000415298 EFCAB13Q8IY85 973 aa23.67■■□□□ 1.38
AP1S3-205ENST00000415298 NARFQ9UHQ1 456 aa23.67■■□□□ 1.38
AP1S3-205ENST00000415298 ATP8B1O43520 1251 aa23.66■■□□□ 1.38
AP1S3-205ENST00000415298 MNAT1P51948 309 aa23.66■■□□□ 1.38
AP1S3-205ENST00000415298 SPC24Q8NBT2 197 aa23.66■■□□□ 1.38
AP1S3-205ENST00000415298 STAG1Q8WVM7 1258 aa23.66■■□□□ 1.38
AP1S3-205ENST00000415298 ERCC4Q92889 916 aaPredicted RBP23.66■■□□□ 1.38
AP1S3-205ENST00000415298 NEBLO76041 1014 aa23.66■■□□□ 1.38
AP1S3-205ENST00000415298 BICDL1Q6ZP65 573 aa23.66■■□□□ 1.38
AP1S3-205ENST00000415298 UBE3BQ7Z3V4 1068 aa23.66■■□□□ 1.38
AP1S3-205ENST00000415298 CWC25Q9NXE8 425 aaPredicted RBP23.66■■□□□ 1.38
AP1S3-205ENST00000415298 ZPR1O75312 459 aa23.65■■□□□ 1.38
AP1S3-205ENST00000415298 GNAI3P08754 354 aa23.65■■□□□ 1.38
AP1S3-205ENST00000415298 USP8P40818 1118 aa23.65■■□□□ 1.38
AP1S3-205ENST00000415298 GNAI2P04899 355 aa23.65■■□□□ 1.38
AP1S3-205ENST00000415298 HCLS1P14317 486 aaPredicted RBP23.65■■□□□ 1.38
AP1S3-205ENST00000415298 ADCY2Q08462 1091 aa23.65■■□□□ 1.38
AP1S3-205ENST00000415298 NLRP10Q86W26 655 aa23.65■■□□□ 1.38
AP1S3-205ENST00000415298 ZNF34Q8IZ26 560 aa23.65■■□□□ 1.38
AP1S3-205ENST00000415298 KAZALD1Q96I82 304 aa23.65■■□□□ 1.38
AP1S3-205ENST00000415298 CAND2O75155 1236 aa23.64■■□□□ 1.38
AP1S3-205ENST00000415298 PTGS1P23219 599 aa23.64■■□□□ 1.38
AP1S3-205ENST00000415298 PLCB2Q00722 1185 aa23.64■■□□□ 1.38
AP1S3-205ENST00000415298 FMNL3Q8IVF7 1028 aa23.64■■□□□ 1.38
AP1S3-205ENST00000415298 GIMAP7Q8NHV1 300 aa23.64■■□□□ 1.38
AP1S3-205ENST00000415298 OAS2P29728 719 aaKnown RBP23.64■■□□□ 1.37
AP1S3-205ENST00000415298 LMAN1P49257 510 aa23.64■■□□□ 1.37
AP1S3-205ENST00000415298 C1QTNF12Q5T7M4 302 aa23.64■■□□□ 1.37
AP1S3-205ENST00000415298 FAM89AQ96GI7 184 aa23.64■■□□□ 1.37
AP1S3-205ENST00000415298 SUCLG2Q96I99 432 aa23.64■■□□□ 1.37
AP1S3-205ENST00000415298 NIP7Q9Y221 180 aaKnown RBP eCLIP23.64■■□□□ 1.37
AP1S3-205ENST00000415298 CCT2P78371 535 aaKnown RBP23.63■■□□□ 1.37
AP1S3-205ENST00000415298 TBC1D9BQ66K14 1250 aa23.63■■□□□ 1.37
AP1S3-205ENST00000415298 SGSM2O43147 1006 aa23.63■■□□□ 1.37
AP1S3-205ENST00000415298 RPS6KA5O75582 802 aa23.63■■□□□ 1.37
AP1S3-205ENST00000415298 AP1ARQ63HQ0 302 aa23.63■■□□□ 1.37
AP1S3-205ENST00000415298 IRAK4Q9NWZ3 460 aa23.63■■□□□ 1.37
AP1S3-205ENST00000415298 USP42Q9H9J4 1324 aaKnown RBP23.62■■□□□ 1.37
AP1S3-205ENST00000415298 TRIM28Q13263 835 aaKnown RBP23.62■■□□□ 1.37
AP1S3-205ENST00000415298 CEP85Q6P2H3 762 aa23.62■■□□□ 1.37
AP1S3-205ENST00000415298 TMCO3Q6UWJ1 677 aa23.62■■□□□ 1.37
AP1S3-205ENST00000415298 ILDR2Q71H61 639 aa23.62■■□□□ 1.37
AP1S3-205ENST00000415298 COL23A1Q86Y22 540 aaPredicted RBP23.62■■□□□ 1.37
AP1S3-205ENST00000415298 C4AP0C0L4 1744 aa23.62■■□□□ 1.37
AP1S3-205ENST00000415298 UTYO14607 1347 aa23.62■■□□□ 1.37
AP1S3-205ENST00000415298 CASP7P55210 303 aa23.62■■□□□ 1.37
AP1S3-205ENST00000415298 EPHA10Q5JZY3 1008 aa23.62■■□□□ 1.37
AP1S3-205ENST00000415298 SUSD4Q5VX71 490 aa23.62■■□□□ 1.37
AP1S3-205ENST00000415298 UPF1Q92900 1129 aaKnown RBP eCLIP23.62■■□□□ 1.37
AP1S3-205ENST00000415298 RGPD3A6NKT7 1758 aaPredicted RBP23.62■■□□□ 1.37
AP1S3-205ENST00000415298 RGPD4Q7Z3J3 1758 aa23.62■■□□□ 1.37
AP1S3-205ENST00000415298 H7C1W4 665 aa23.61■■□□□ 1.37
AP1S3-205ENST00000415298 TTLL5Q6EMB2 1281 aa23.61■■□□□ 1.37
AP1S3-205ENST00000415298 ARGLU1Q9NWB6 273 aaPredicted RBP23.61■■□□□ 1.37
AP1S3-205ENST00000415298 CCDC186Q7Z3E2 898 aa23.61■■□□□ 1.37
AP1S3-205ENST00000415298 TADA2BQ86TJ2 420 aa23.61■■□□□ 1.37
AP1S3-205ENST00000415298 GNL3LQ9NVN8 582 aaKnown RBP23.61■■□□□ 1.37
AP1S3-205ENST00000415298 PNMA6EA0A0J9YXQ4 647 aa23.6■■□□□ 1.37
AP1S3-205ENST00000415298 CLEC4GQ6UXB4 293 aa23.6■■□□□ 1.37
AP1S3-205ENST00000415298 ZCCHC17Q9NP64 241 aaKnown RBP23.6■■□□□ 1.37
AP1S3-205ENST00000415298 AP5Z1O43299 807 aa23.6■■□□□ 1.37
AP1S3-205ENST00000415298 CCDC125Q86Z20 511 aa23.6■■□□□ 1.37
AP1S3-205ENST00000415298 SLC24A3Q9HC58 644 aa23.6■■□□□ 1.37
AP1S3-205ENST00000415298 ADRA2BP18089 450 aa23.59■■□□□ 1.37
AP1S3-205ENST00000415298 SLC15A2Q16348 729 aa23.59■■□□□ 1.37
AP1S3-205ENST00000415298 BICC1Q9H694 974 aaKnown RBP23.59■■□□□ 1.37
AP1S3-205ENST00000415298 ZNF652Q9Y2D9 606 aa23.59■■□□□ 1.37
AP1S3-205ENST00000415298 BCORQ6W2J9 1755 aa23.59■■□□□ 1.37
AP1S3-205ENST00000415298 ANKRD18BA2A2Z9 1011 aa23.59■■□□□ 1.37
AP1S3-205ENST00000415298 PDRG1Q9NUG6 133 aa23.59■■□□□ 1.37
AP1S3-205ENST00000415298 TRMT112Q9UI30 125 aaKnown RBP23.59■■□□□ 1.37
AP1S3-205ENST00000415298 ADAM21Q9UKJ8 722 aa23.59■■□□□ 1.37
AP1S3-205ENST00000415298 PNPLA7Q6ZV29 1317 aa23.59■■□□□ 1.37
AP1S3-205ENST00000415298 ANKRD36CQ5JPF3 1778 aa23.58■■□□□ 1.37
AP1S3-205ENST00000415298 TUBGCP6Q96RT7 1819 aa23.58■■□□□ 1.37
AP1S3-205ENST00000415298 A0A087WUV0 522 aaPredicted RBP23.58■■□□□ 1.37
AP1S3-205ENST00000415298 GYS1P13807 737 aa23.58■■□□□ 1.37
AP1S3-205ENST00000415298 CHAMP1Q96JM3 812 aa23.58■■□□□ 1.37
AP1S3-205ENST00000415298 PDGFDQ9GZP0 370 aaPredicted RBP23.58■■□□□ 1.37
AP1S3-205ENST00000415298 A1CFQ9NQ94 594 aaKnown RBP23.58■■□□□ 1.37
AP1S3-205ENST00000415298 CCDC171Q6TFL3 1326 aa23.58■■□□□ 1.37
AP1S3-205ENST00000415298 ANKRD44Q8N8A2 993 aa23.58■■□□□ 1.36
AP1S3-205ENST00000415298 MKRN1Q9UHC7 482 aaKnown RBP23.58■■□□□ 1.36
AP1S3-205ENST00000415298 PAX7P23759 505 aa23.57■■□□□ 1.36
AP1S3-205ENST00000415298 NUTM1Q86Y26 1132 aa23.57■■□□□ 1.36
AP1S3-205ENST00000415298 TEX11Q8IYF3 940 aa23.57■■□□□ 1.36
AP1S3-205ENST00000415298 KLHL23Q8NBE8 558 aa23.57■■□□□ 1.36
AP1S3-205ENST00000415298 PIK3R5Q8WYR1 880 aa23.57■■□□□ 1.36
AP1S3-205ENST00000415298 CCDC183Q5T5S1 534 aa23.57■■□□□ 1.36
AP1S3-205ENST00000415298 GBP6Q6ZN66 633 aa23.57■■□□□ 1.36
AP1S3-205ENST00000415298 ZBTB38Q8NAP3 1195 aaPredicted RBP23.57■■□□□ 1.36
AP1S3-205ENST00000415298 NPHP1O15259 732 aa23.56■■□□□ 1.36
AP1S3-205ENST00000415298 ELF1P32519 619 aa23.56■■□□□ 1.36
AP1S3-205ENST00000415298 ERCC6LQ2NKX8 1250 aa23.56■■□□□ 1.36
AP1S3-205ENST00000415298 PPP1R42Q7Z4L9 355 aa23.56■■□□□ 1.36
AP1S3-205ENST00000415298 RPAP2Q8IXW5 612 aaPredicted RBP23.56■■□□□ 1.36
AP1S3-205ENST00000415298 TBC1D8BQ0IIM8 1120 aa23.56■■□□□ 1.36
AP1S3-205ENST00000415298 SMC1AQ14683 1233 aaKnown RBP23.56■■□□□ 1.36
AP1S3-205ENST00000415298 CCDC24Q8N4L8 307 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms