RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 RETREG2Q8NC44 543 aa4.52□□□□□ -1.69
RNU6-1140P-201ENST00000410517 ADAMTS19Q8TE59 1207 aa4.52□□□□□ -1.69
RNU6-1140P-201ENST00000410517 RELTQ969Z4 430 aa4.52□□□□□ -1.69
RNU6-1140P-201ENST00000410517 LIN37Q96GY3 246 aaPredicted RBP4.52□□□□□ -1.69
RNU6-1140P-201ENST00000410517 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.51□□□□□ -1.69
RNU6-1140P-201ENST00000410517 UBAP1LF5GYI3 381 aa4.51□□□□□ -1.69
RNU6-1140P-201ENST00000410517 PSPNO60542 156 aa4.51□□□□□ -1.69
RNU6-1140P-201ENST00000410517 RAB6AP20340 208 aa4.51□□□□□ -1.69
RNU6-1140P-201ENST00000410517 CD96P40200 585 aa4.51□□□□□ -1.69
RNU6-1140P-201ENST00000410517 MAP7Q14244 749 aa4.51□□□□□ -1.69
RNU6-1140P-201ENST00000410517 CEP120Q8N960 986 aa4.51□□□□□ -1.69
RNU6-1140P-201ENST00000410517 MYO19Q96H55 970 aa4.51□□□□□ -1.69
RNU6-1140P-201ENST00000410517 UCN2Q96RP3 112 aa4.51□□□□□ -1.69
RNU6-1140P-201ENST00000410517 ABCC9O60706 1549 aa4.51□□□□□ -1.69
RNU6-1140P-201ENST00000410517 LOC100289279A0A1B0GTE1 492 aa4.5□□□□□ -1.69
RNU6-1140P-201ENST00000410517 NFIBO00712 420 aa4.5□□□□□ -1.69
RNU6-1140P-201ENST00000410517 DLGAP3O95886 979 aa4.5□□□□□ -1.69
RNU6-1140P-201ENST00000410517 HOXA5P20719 270 aa4.5□□□□□ -1.69
RNU6-1140P-201ENST00000410517 SOX4Q06945 474 aaPredicted RBP4.5□□□□□ -1.69
RNU6-1140P-201ENST00000410517 SWI5Q1ZZU3 235 aa4.5□□□□□ -1.69
RNU6-1140P-201ENST00000410517 EXOSC6Q5RKV6 272 aaKnown RBP4.5□□□□□ -1.69
RNU6-1140P-201ENST00000410517 AEBP1Q8IUX7 1158 aa4.5□□□□□ -1.69
RNU6-1140P-201ENST00000410517 FAM200AQ8TCP9 573 aa4.5□□□□□ -1.69
RNU6-1140P-201ENST00000410517 C20orf173Q96LM9 149 aa4.5□□□□□ -1.69
RNU6-1140P-201ENST00000410517 LRFN2Q9ULH4 789 aa4.5□□□□□ -1.69
RNU6-1140P-201ENST00000410517 USP17L15C9J2P7 530 aa4.49□□□□□ -1.69
RNU6-1140P-201ENST00000410517 USP17L10C9JJH3 530 aa4.49□□□□□ -1.69
RNU6-1140P-201ENST00000410517 USP17L13C9JLJ4 530 aa4.49□□□□□ -1.69
RNU6-1140P-201ENST00000410517 USP17L12C9JPN9 530 aa4.49□□□□□ -1.69
RNU6-1140P-201ENST00000410517 USP17L11C9JVI0 530 aa4.49□□□□□ -1.69
RNU6-1140P-201ENST00000410517 USP17L21D6R901 530 aa4.49□□□□□ -1.69
RNU6-1140P-201ENST00000410517 USP17L18D6R9N7 530 aa4.49□□□□□ -1.69
RNU6-1140P-201ENST00000410517 USP17L22D6RA61 530 aa4.49□□□□□ -1.69
RNU6-1140P-201ENST00000410517 USP17L17D6RBQ6 530 aa4.49□□□□□ -1.69
RNU6-1140P-201ENST00000410517 USP17L19D6RCP7 530 aa4.49□□□□□ -1.69
RNU6-1140P-201ENST00000410517 USP17L20D6RJB6 530 aa4.49□□□□□ -1.69
RNU6-1140P-201ENST00000410517 NPIPB6E9PJ23 425 aa4.49□□□□□ -1.69
RNU6-1140P-201ENST00000410517 KIF4AO95239 1232 aa4.49□□□□□ -1.69
RNU6-1140P-201ENST00000410517 CYP2E1P05181 493 aaPredicted RBP4.49□□□□□ -1.69
RNU6-1140P-201ENST00000410517 USP17L24Q0WX57 530 aa4.49□□□□□ -1.69
RNU6-1140P-201ENST00000410517 PLD6Q8N2A8 252 aaKnown RBP4.49□□□□□ -1.69
RNU6-1140P-201ENST00000410517 BCL11AQ9H165 835 aa4.49□□□□□ -1.69
RNU6-1140P-201ENST00000410517 PODXL2Q9NZ53 605 aa4.49□□□□□ -1.69
RNU6-1140P-201ENST00000410517 CRIM1Q9NZV1 1036 aa4.49□□□□□ -1.69
RNU6-1140P-201ENST00000410517 NOVA2Q9UNW9 492 aaKnown RBP4.49□□□□□ -1.69
RNU6-1140P-201ENST00000410517 OGFOD3Q6PK18 319 aa4.48□□□□□ -1.69
RNU6-1140P-201ENST00000410517 PRR23BQ6ZRT6 265 aa4.48□□□□□ -1.69
RNU6-1140P-201ENST00000410517 FLAD1Q8NFF5 587 aa4.48□□□□□ -1.69
RNU6-1140P-201ENST00000410517 NETO1Q8TDF5 533 aa4.48□□□□□ -1.69
RNU6-1140P-201ENST00000410517 SEMA6CQ9H3T2 930 aa4.48□□□□□ -1.69
RNU6-1140P-201ENST00000410517 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.48□□□□□ -1.69
RNU6-1140P-201ENST00000410517 VAV3Q9UKW4 847 aa4.48□□□□□ -1.69
RNU6-1140P-201ENST00000410517 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.47□□□□□ -1.69
RNU6-1140P-201ENST00000410517 SOX1O00570 391 aaPredicted RBP4.47□□□□□ -1.69
RNU6-1140P-201ENST00000410517 KRT1P04264 644 aa4.47□□□□□ -1.69
RNU6-1140P-201ENST00000410517 MPZL3Q6UWV2 235 aa4.47□□□□□ -1.69
RNU6-1140P-201ENST00000410517 ANKMY2Q8IV38 441 aa4.47□□□□□ -1.69
RNU6-1140P-201ENST00000410517 FAM181AQ8N9Y4 354 aa4.47□□□□□ -1.69
RNU6-1140P-201ENST00000410517 PIK3R5Q8WYR1 880 aa4.47□□□□□ -1.69
RNU6-1140P-201ENST00000410517 ACTL7BQ9Y614 415 aa4.47□□□□□ -1.69
RNU6-1140P-201ENST00000410517 FOXO3O43524 673 aa4.46□□□□□ -1.7
RNU6-1140P-201ENST00000410517 FOXD2O60548 495 aaPredicted RBP4.46□□□□□ -1.7
RNU6-1140P-201ENST00000410517 KRTAP1-1Q07627 177 aa4.46□□□□□ -1.7
RNU6-1140P-201ENST00000410517 CYP27C1Q4G0S4 372 aa4.46□□□□□ -1.7
RNU6-1140P-201ENST00000410517 KANK4Q5T7N3 995 aaPredicted RBP4.46□□□□□ -1.7
RNU6-1140P-201ENST00000410517 TMCO4Q5TGY1 634 aa4.46□□□□□ -1.7
RNU6-1140P-201ENST00000410517 CIAPIN1Q6FI81 312 aa4.46□□□□□ -1.7
RNU6-1140P-201ENST00000410517 LGR6Q9HBX8 967 aa4.46□□□□□ -1.7
RNU6-1140P-201ENST00000410517 PRDM7Q9NQW5 492 aa4.46□□□□□ -1.7
RNU6-1140P-201ENST00000410517 PDE2AO00408 941 aaPredicted RBP4.45□□□□□ -1.7
RNU6-1140P-201ENST00000410517 DYNC1LI2O43237 492 aaPredicted RBP4.45□□□□□ -1.7
RNU6-1140P-201ENST00000410517 ADH5P11766 374 aa4.45□□□□□ -1.7
RNU6-1140P-201ENST00000410517 ACPPP15309 386 aa4.45□□□□□ -1.7
RNU6-1140P-201ENST00000410517 RANGAP1P46060 587 aaPredicted RBP4.45□□□□□ -1.7
RNU6-1140P-201ENST00000410517 PRKCQQ04759 706 aa4.45□□□□□ -1.7
RNU6-1140P-201ENST00000410517 DPYDQ12882 1025 aa4.45□□□□□ -1.7
RNU6-1140P-201ENST00000410517 IKBKEQ14164 716 aa4.45□□□□□ -1.7
RNU6-1140P-201ENST00000410517 AOC3Q16853 763 aa4.45□□□□□ -1.7
RNU6-1140P-201ENST00000410517 SLC23A3Q6PIS1 610 aa4.45□□□□□ -1.7
RNU6-1140P-201ENST00000410517 DYMQ7RTS9 669 aa4.45□□□□□ -1.7
RNU6-1140P-201ENST00000410517 ETFBKMTQ8IXQ9 262 aa4.45□□□□□ -1.7
RNU6-1140P-201ENST00000410517 C1GALT1Q9NS00 363 aa4.45□□□□□ -1.7
RNU6-1140P-201ENST00000410517 ABI2Q9NYB9 513 aaPredicted RBP4.45□□□□□ -1.7
RNU6-1140P-201ENST00000410517 SOX13Q9UN79 622 aa4.45□□□□□ -1.7
RNU6-1140P-201ENST00000410517 FNDC3AQ9Y2H6 1198 aaKnown RBP4.45□□□□□ -1.7
RNU6-1140P-201ENST00000410517 TRPA1O75762 1119 aa4.44□□□□□ -1.7
RNU6-1140P-201ENST00000410517 TMEM253P0C7T8 217 aa4.44□□□□□ -1.7
RNU6-1140P-201ENST00000410517 PTK7Q13308 1070 aa4.44□□□□□ -1.7
RNU6-1140P-201ENST00000410517 KCNA10Q16322 511 aa4.44□□□□□ -1.7
RNU6-1140P-201ENST00000410517 COX20Q5RI15 118 aa4.44□□□□□ -1.7
RNU6-1140P-201ENST00000410517 ANGEL2Q5VTE6 544 aaKnown RBP4.44□□□□□ -1.7
RNU6-1140P-201ENST00000410517 FYB2Q5VWT5 728 aa4.44□□□□□ -1.7
RNU6-1140P-201ENST00000410517 GGNQ86UU5 652 aa4.44□□□□□ -1.7
RNU6-1140P-201ENST00000410517 CLP1Q92989 425 aaKnown RBP4.44□□□□□ -1.7
RNU6-1140P-201ENST00000410517 HHIPQ96QV1 700 aa4.44□□□□□ -1.7
RNU6-1140P-201ENST00000410517 TMPRSS5Q9H3S3 457 aa4.44□□□□□ -1.7
RNU6-1140P-201ENST00000410517 KANSL3Q9P2N6 904 aa4.44□□□□□ -1.7
RNU6-1140P-201ENST00000410517 DAGLAQ9Y4D2 1042 aa4.44□□□□□ -1.7
RNU6-1140P-201ENST00000410517 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.43□□□□□ -1.7
RNU6-1140P-201ENST00000410517 NFKBIEO00221 500 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms