RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 TUBE1Q9UJT0 475 aa4.52□□□□□ -1.69
RTN4-209ENST00000405240 DUOX1Q9NRD9 1551 aa4.52□□□□□ -1.69
RTN4-209ENST00000405240 KIF28PB7ZC32 967 aa4.51□□□□□ -1.69
RTN4-209ENST00000405240 H3BQV1 296 aa4.51□□□□□ -1.69
RTN4-209ENST00000405240 SH2B2O14492 632 aaPredicted RBP4.51□□□□□ -1.69
RTN4-209ENST00000405240 CYP19A1P11511 503 aaPredicted RBP4.51□□□□□ -1.69
RTN4-209ENST00000405240 U2AF2P26368 475 aaKnown RBP eCLIP4.51□□□□□ -1.697e-8■■□□□ 13
RTN4-209ENST00000405240 ZAP70P43403 619 aa4.51□□□□□ -1.69
RTN4-209ENST00000405240 KIF23Q02241 960 aaPredicted RBP4.51□□□□□ -1.69
RTN4-209ENST00000405240 NCAPHQ15003 741 aa4.51□□□□□ -1.69
RTN4-209ENST00000405240 CCDC158Q5M9N0 1113 aa4.51□□□□□ -1.69
RTN4-209ENST00000405240 IFFO2Q5TF58 517 aa4.51□□□□□ -1.69
RTN4-209ENST00000405240 CCDC186Q7Z3E2 898 aa4.51□□□□□ -1.69
RTN4-209ENST00000405240 PIAS4Q8N2W9 510 aaPredicted RBP4.51□□□□□ -1.69
RTN4-209ENST00000405240 IGDCC4Q8TDY8 1250 aa4.51□□□□□ -1.69
RTN4-209ENST00000405240 CCDC94Q9BW85 323 aaPredicted RBP4.51□□□□□ -1.69
RTN4-209ENST00000405240 NCOA5Q9HCD5 579 aaKnown RBP4.51□□□□□ -1.69
RTN4-209ENST00000405240 FAM217BQ9NTX9 383 aaPredicted RBP4.51□□□□□ -1.69
RTN4-209ENST00000405240 FAM53CQ9NYF3 392 aa4.51□□□□□ -1.69
RTN4-209ENST00000405240 IMPACTQ9P2X3 320 aa4.51□□□□□ -1.69
RTN4-209ENST00000405240 TACC3Q9Y6A5 838 aa4.51□□□□□ -1.69
RTN4-209ENST00000405240 PPP6R2O75170 966 aa4.51□□□□□ -1.69
RTN4-209ENST00000405240 HSP90B1P14625 803 aaKnown RBP4.51□□□□□ -1.69
RTN4-209ENST00000405240 CMA1P23946 247 aa4.51□□□□□ -1.69
RTN4-209ENST00000405240 IMMTQ16891 758 aaKnown RBP4.51□□□□□ -1.69
RTN4-209ENST00000405240 NCOA7Q8NI08 942 aa4.51□□□□□ -1.69
RTN4-209ENST00000405240 KCNG4Q8TDN1 519 aa4.51□□□□□ -1.69
RTN4-209ENST00000405240 MRPS27Q92552 414 aaKnown RBP4.51□□□□□ -1.69
RTN4-209ENST00000405240 NEUROD6Q96NK8 337 aa4.51□□□□□ -1.69
RTN4-209ENST00000405240 ZBTB3Q9H5J0 574 aa4.51□□□□□ -1.69
RTN4-209ENST00000405240 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.51□□□□□ -1.69
RTN4-209ENST00000405240 ANO10Q9NW15 660 aa4.51□□□□□ -1.69
RTN4-209ENST00000405240 CLIC4Q9Y696 253 aa4.51□□□□□ -1.69
RTN4-209ENST00000405240 CDK5RAP2Q96SN8 1893 aa4.51□□□□□ -1.69
RTN4-209ENST00000405240 SMTNL1A8MU46 457 aa4.51□□□□□ -1.69
RTN4-209ENST00000405240 RIOK3O14730 519 aaKnown RBP4.51□□□□□ -1.69
RTN4-209ENST00000405240 PRC1O43663 620 aa4.51□□□□□ -1.69
RTN4-209ENST00000405240 RCAN1P53805 252 aa4.51□□□□□ -1.69
RTN4-209ENST00000405240 CTSWP56202 376 aa4.51□□□□□ -1.69
RTN4-209ENST00000405240 SLC39A14Q15043 492 aa4.51□□□□□ -1.69
RTN4-209ENST00000405240 TTF1Q15361 905 aaPredicted RBP4.51□□□□□ -1.69
RTN4-209ENST00000405240 CCDC57Q2TAC2 916 aa4.51□□□□□ -1.69
RTN4-209ENST00000405240 MYSM1Q5VVJ2 828 aa4.51□□□□□ -1.69
RTN4-209ENST00000405240 BCL2L12Q9HB09 334 aa4.51□□□□□ -1.69
RTN4-209ENST00000405240 GPHNQ9NQX3 736 aaPredicted RBP4.51□□□□□ -1.69
RTN4-209ENST00000405240 KIAA1468Q9P260 1216 aa4.51□□□□□ -1.69
RTN4-209ENST00000405240 CCDC88AQ3V6T2 1871 aa4.51□□□□□ -1.69
RTN4-209ENST00000405240 IKBKBO14920 756 aa4.51□□□□□ -1.69
RTN4-209ENST00000405240 GPAA1O43292 621 aa4.51□□□□□ -1.69
RTN4-209ENST00000405240 NDUFA8P51970 172 aa4.51□□□□□ -1.69
RTN4-209ENST00000405240 CCT2P78371 535 aaKnown RBP4.51□□□□□ -1.69
RTN4-209ENST00000405240 RBM10P98175 930 aaKnown RBP4.51□□□□□ -1.69
RTN4-209ENST00000405240 MDM2Q00987 491 aaPredicted RBP4.51□□□□□ -1.69
RTN4-209ENST00000405240 LRMPQ12912 555 aa4.51□□□□□ -1.69
RTN4-209ENST00000405240 HLFQ16534 295 aa4.51□□□□□ -1.69
RTN4-209ENST00000405240 TTC39AQ5SRH9 613 aa4.51□□□□□ -1.69
RTN4-209ENST00000405240 TOM1L2Q6ZVM7 507 aa4.51□□□□□ -1.69
RTN4-209ENST00000405240 CYB5R4Q7L1T6 521 aa4.51□□□□□ -1.69
RTN4-209ENST00000405240 TBC1D10CQ8IV04 446 aa4.51□□□□□ -1.69
RTN4-209ENST00000405240 BICD2Q8TD16 824 aa4.51□□□□□ -1.69
RTN4-209ENST00000405240 TMX1Q9H3N1 280 aa4.51□□□□□ -1.69
RTN4-209ENST00000405240 PIH1D3Q9NQM4 214 aaKnown RBP4.51□□□□□ -1.69
RTN4-209ENST00000405240 PAXBP1Q9Y5B6 917 aa4.51□□□□□ -1.69
RTN4-209ENST00000405240 DDX60LQ5H9U9 1706 aaKnown RBP4.5□□□□□ -1.69
RTN4-209ENST00000405240 GOLGA6L4A6NEF3 574 aa4.5□□□□□ -1.69
RTN4-209ENST00000405240 MYO1BO43795 1136 aa4.5□□□□□ -1.69
RTN4-209ENST00000405240 DHX16O60231 1041 aaKnown RBP4.5□□□□□ -1.69
RTN4-209ENST00000405240 PDE8BO95263 885 aa4.5□□□□□ -1.69
RTN4-209ENST00000405240 LIFRP42702 1097 aa4.5□□□□□ -1.69
RTN4-209ENST00000405240 NLRP12P59046 1061 aa4.5□□□□□ -1.69
RTN4-209ENST00000405240 GLIPR1L2Q4G1C9 344 aa4.5□□□□□ -1.69
RTN4-209ENST00000405240 HSP90AB3PQ58FF7 597 aa4.5□□□□□ -1.69
RTN4-209ENST00000405240 NT5DC1Q5TFE4 455 aa4.5□□□□□ -1.69
RTN4-209ENST00000405240 SMAP1Q8IYB5 467 aaPredicted RBP4.5□□□□□ -1.69
RTN4-209ENST00000405240 STRBPQ96SI9 672 aaKnown RBP4.5□□□□□ -1.69
RTN4-209ENST00000405240 LY9Q9HBG7 655 aa4.5□□□□□ -1.69
RTN4-209ENST00000405240 SLAIN2Q9P270 581 aa4.5□□□□□ -1.69
RTN4-209ENST00000405240 CLIP2Q9UDT6 1046 aa4.5□□□□□ -1.69
RTN4-209ENST00000405240 MROH7-TTC4A0A0A0MT08 1334 aa4.5□□□□□ -1.69
RTN4-209ENST00000405240 UBN2Q6ZU65 1347 aa4.5□□□□□ -1.69
RTN4-209ENST00000405240 MROH5Q6ZUA9 1318 aa4.5□□□□□ -1.69
RTN4-209ENST00000405240 PNPLA7Q6ZV29 1317 aa4.5□□□□□ -1.69
RTN4-209ENST00000405240 WDHD1O75717 1129 aaPredicted RBP4.5□□□□□ -1.69
RTN4-209ENST00000405240 IFIT5Q13325 482 aaKnown RBP4.5□□□□□ -1.69
RTN4-209ENST00000405240 ATP2B3Q16720 1220 aa4.5□□□□□ -1.69
RTN4-209ENST00000405240 RESP18Q5W5W9 173 aa4.5□□□□□ -1.69
RTN4-209ENST00000405240 ANO1Q5XXA6 986 aa4.5□□□□□ -1.69
RTN4-209ENST00000405240 DNAJC10Q8IXB1 793 aa4.5□□□□□ -1.69
RTN4-209ENST00000405240 FSIP1Q8NA03 581 aa4.5□□□□□ -1.69
RTN4-209ENST00000405240 SPC24Q8NBT2 197 aa4.5□□□□□ -1.69
RTN4-209ENST00000405240 TMEM87BQ96K49 555 aa4.5□□□□□ -1.69
RTN4-209ENST00000405240 GREM2Q9H772 168 aa4.5□□□□□ -1.69
RTN4-209ENST00000405240 PRDM11Q9NQV5 511 aa4.5□□□□□ -1.69
RTN4-209ENST00000405240 ASAP1Q9ULH1 1129 aa4.5□□□□□ -1.69
RTN4-209ENST00000405240 FOCADQ5VW36 1801 aa4.5□□□□□ -1.69
RTN4-209ENST00000405240 SPTLC2O15270 562 aa4.5□□□□□ -1.69
RTN4-209ENST00000405240 PDE8AO60658 829 aa4.5□□□□□ -1.69
RTN4-209ENST00000405240 ITGA6P23229 1130 aa4.5□□□□□ -1.69
RTN4-209ENST00000405240 DHX8Q14562 1220 aaKnown RBP4.5□□□□□ -1.69
RTN4-209ENST00000405240 KIF6Q6ZMV9 814 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms