RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 CNNM2Q9H8M5 875 aa13.17□□□□□ -0.3
PCDHGA8-201ENST00000398604 ZNF408Q9H9D4 720 aa13.17□□□□□ -0.3
PCDHGA8-201ENST00000398604 PCDH11XQ9BZA7 1347 aa13.17□□□□□ -0.3
PCDHGA8-201ENST00000398604 PCDH11YQ9BZA8 1340 aa13.17□□□□□ -0.3
PCDHGA8-201ENST00000398604 EZRP15311 586 aaKnown RBP13.17□□□□□ -0.3
PCDHGA8-201ENST00000398604 RAB3GAP1Q15042 981 aa13.17□□□□□ -0.3
PCDHGA8-201ENST00000398604 JADE2Q9NQC1 790 aa13.17□□□□□ -0.3
PCDHGA8-201ENST00000398604 TRIM75PA6NK02 468 aa13.16□□□□□ -0.3
PCDHGA8-201ENST00000398604 GBP2P32456 591 aaPredicted RBP13.16□□□□□ -0.3
PCDHGA8-201ENST00000398604 UBASH3AP57075 661 aa13.16□□□□□ -0.3
PCDHGA8-201ENST00000398604 IFFO1Q0D2I5 559 aa13.16□□□□□ -0.3
PCDHGA8-201ENST00000398604 FAM212AQ96EL1 285 aa13.16□□□□□ -0.3
PCDHGA8-201ENST00000398604 DNAJC25Q9H1X3 360 aa13.16□□□□□ -0.3
PCDHGA8-201ENST00000398604 CREB3L3Q68CJ9 461 aa13.16□□□□□ -0.3
PCDHGA8-201ENST00000398604 FAM173BQ6P4H8 233 aa13.16□□□□□ -0.3
PCDHGA8-201ENST00000398604 PLEKHM2Q8IWE5 1019 aa13.16□□□□□ -0.3
PCDHGA8-201ENST00000398604 CNBD1Q8NA66 436 aa13.16□□□□□ -0.3
PCDHGA8-201ENST00000398604 SH3TC1Q8TE82 1336 aa13.16□□□□□ -0.3
PCDHGA8-201ENST00000398604 ZBTB7BO15156 539 aaPredicted RBP13.16□□□□□ -0.3
PCDHGA8-201ENST00000398604 DPH6Q7L8W6 267 aa13.16□□□□□ -0.3
PCDHGA8-201ENST00000398604 HOOK3Q86VS8 718 aa13.16□□□□□ -0.3
PCDHGA8-201ENST00000398604 ZNF496Q96IT1 587 aaPredicted RBP13.16□□□□□ -0.3
PCDHGA8-201ENST00000398604 NYXQ9GZU5 481 aa13.16□□□□□ -0.3
PCDHGA8-201ENST00000398604 ITGA6P23229 1130 aa13.16□□□□□ -0.3
PCDHGA8-201ENST00000398604 IL13P35225 146 aa13.16□□□□□ -0.3
PCDHGA8-201ENST00000398604 ZSCAN23Q3MJ62 389 aa13.16□□□□□ -0.3
PCDHGA8-201ENST00000398604 CCDC66A2RUB6 948 aa13.15□□□□□ -0.3
PCDHGA8-201ENST00000398604 PHACTR2O75167 634 aa13.15□□□□□ -0.3
PCDHGA8-201ENST00000398604 POLD1P28340 1107 aa13.15□□□□□ -0.3
PCDHGA8-201ENST00000398604 MCM7P33993 719 aa13.15□□□□□ -0.3
PCDHGA8-201ENST00000398604 GNAQP50148 359 aa13.15□□□□□ -0.3
PCDHGA8-201ENST00000398604 MAPK8IP2Q13387 824 aaPredicted RBP13.15□□□□□ -0.3
PCDHGA8-201ENST00000398604 ANO6Q4KMQ2 910 aa13.15□□□□□ -0.3
PCDHGA8-201ENST00000398604 FNBP4Q8N3X1 1017 aaPredicted RBP13.15□□□□□ -0.3
PCDHGA8-201ENST00000398604 PKNOX2Q96KN3 472 aa13.15□□□□□ -0.3
PCDHGA8-201ENST00000398604 MAP3K5Q99683 1374 aa13.15□□□□□ -0.3
PCDHGA8-201ENST00000398604 UFL1O94874 794 aa13.15□□□□□ -0.3
PCDHGA8-201ENST00000398604 FCHSD1Q86WN1 690 aa13.15□□□□□ -0.3
PCDHGA8-201ENST00000398604 ZNF335Q9H4Z2 1342 aaPredicted RBP13.15□□□□□ -0.3
PCDHGA8-201ENST00000398604 USP6P35125 1406 aa13.15□□□□□ -0.3
PCDHGA8-201ENST00000398604 SPDYE3A6NKU9 549 aa13.15□□□□□ -0.3
PCDHGA8-201ENST00000398604 B4E1Z4 1266 aa13.15□□□□□ -0.3
PCDHGA8-201ENST00000398604 NBPF14Q5TI25 921 aa13.15□□□□□ -0.3
PCDHGA8-201ENST00000398604 MRPS27Q92552 414 aaKnown RBP13.15□□□□□ -0.3
PCDHGA8-201ENST00000398604 SPATA31D1Q6ZQQ2 1576 aa13.15□□□□□ -0.3
PCDHGA8-201ENST00000398604 CBX1P83916 185 aa13.14□□□□□ -0.31
PCDHGA8-201ENST00000398604 SPTLC2O15270 562 aa13.14□□□□□ -0.31
PCDHGA8-201ENST00000398604 CHMLP26374 656 aa13.14□□□□□ -0.31
PCDHGA8-201ENST00000398604 UBE4AQ14139 1066 aa13.14□□□□□ -0.31
PCDHGA8-201ENST00000398604 CCDC186Q7Z3E2 898 aa13.14□□□□□ -0.31
PCDHGA8-201ENST00000398604 ERMNQ8TAM6 284 aa13.14□□□□□ -0.31
PCDHGA8-201ENST00000398604 C6orf50Q9HD87 102 aa13.14□□□□□ -0.31
PCDHGA8-201ENST00000398604 RTL1A6NKG5 1358 aa13.14□□□□□ -0.31
PCDHGA8-201ENST00000398604 STXBP4Q6ZWJ1 553 aa13.14□□□□□ -0.31
PCDHGA8-201ENST00000398604 TEX11Q8IYF3 940 aa13.14□□□□□ -0.31
PCDHGA8-201ENST00000398604 FRMPD1Q5SYB0 1578 aa13.14□□□□□ -0.31
PCDHGA8-201ENST00000398604 PTCH1Q13635 1447 aa13.14□□□□□ -0.31
PCDHGA8-201ENST00000398604 GPCPD1Q9NPB8 672 aa13.14□□□□□ -0.31
PCDHGA8-201ENST00000398604 SETD1BQ9UPS6 1966 aaKnown RBP13.14□□□□□ -0.31
PCDHGA8-201ENST00000398604 NRXN1Q9ULB1 1477 aa13.13□□□□□ -0.31
PCDHGA8-201ENST00000398604 PTPDC1A2A3K4 754 aa13.13□□□□□ -0.31
PCDHGA8-201ENST00000398604 EYA2O00167 538 aa13.13□□□□□ -0.31
PCDHGA8-201ENST00000398604 DHX32Q7L7V1 743 aaKnown RBP13.13□□□□□ -0.31
PCDHGA8-201ENST00000398604 AOPEPQ8N6M6 819 aa13.13□□□□□ -0.31
PCDHGA8-201ENST00000398604 GINS2Q9Y248 185 aa13.13□□□□□ -0.31
PCDHGA8-201ENST00000398604 OTUD7BQ6GQQ9 843 aa13.13□□□□□ -0.31
PCDHGA8-201ENST00000398604 KANK3Q6NY19 840 aa13.13□□□□□ -0.31
PCDHGA8-201ENST00000398604 KCNG4Q8TDN1 519 aa13.13□□□□□ -0.31
PCDHGA8-201ENST00000398604 FERMT2Q96AC1 680 aa13.13□□□□□ -0.31
PCDHGA8-201ENST00000398604 DLC1Q96QB1 1528 aa13.13□□□□□ -0.31
PCDHGA8-201ENST00000398604 NCOA5Q9HCD5 579 aaKnown RBP13.13□□□□□ -0.31
PCDHGA8-201ENST00000398604 BACH1O14867 736 aa13.12□□□□□ -0.31
PCDHGA8-201ENST00000398604 TRERF1Q96PN7 1200 aa13.12□□□□□ -0.31
PCDHGA8-201ENST00000398604 ARMT1Q9H993 441 aa13.12□□□□□ -0.31
PCDHGA8-201ENST00000398604 KIAA1210Q9ULL0 1709 aa13.12□□□□□ -0.31
PCDHGA8-201ENST00000398604 KIF2AO00139 706 aaPredicted RBP13.12□□□□□ -0.31
PCDHGA8-201ENST00000398604 F13A1P00488 732 aa13.12□□□□□ -0.31
PCDHGA8-201ENST00000398604 GJC1P36383 396 aa13.12□□□□□ -0.31
PCDHGA8-201ENST00000398604 EDC3Q96F86 508 aaKnown RBP13.12□□□□□ -0.31
PCDHGA8-201ENST00000398604 TTC12Q9H892 705 aaPredicted RBP13.12□□□□□ -0.31
PCDHGA8-201ENST00000398604 PRDM10Q9NQV6 1147 aa13.12□□□□□ -0.31
PCDHGA8-201ENST00000398604 TCP10Q12799 353 aa13.12□□□□□ -0.31
PCDHGA8-201ENST00000398604 SYNCQ9H7C4 482 aa13.12□□□□□ -0.31
PCDHGA8-201ENST00000398604 NEURL4Q96JN8 1562 aa13.12□□□□□ -0.31
PCDHGA8-201ENST00000398604 KRT79Q5XKE5 535 aa13.12□□□□□ -0.31
PCDHGA8-201ENST00000398604 FAM227BQ96M60 508 aa13.12□□□□□ -0.31
PCDHGA8-201ENST00000398604 COMMD10Q9Y6G5 202 aa13.12□□□□□ -0.31
PCDHGA8-201ENST00000398604 PNMA6EA0A0J9YXQ4 647 aa13.11□□□□□ -0.31
PCDHGA8-201ENST00000398604 GOLGA6L10A0A0M3HER8 536 aa13.11□□□□□ -0.31
PCDHGA8-201ENST00000398604 SNW1Q13573 536 aaKnown RBP13.11□□□□□ -0.31
PCDHGA8-201ENST00000398604 LETM2Q2VYF4 491 aa13.11□□□□□ -0.31
PCDHGA8-201ENST00000398604 hCG_1642624A0A1W2PR95 340 aa13.11□□□□□ -0.31
PCDHGA8-201ENST00000398604 PSMA7O14818 248 aa13.11□□□□□ -0.31
PCDHGA8-201ENST00000398604 HIBADHP31937 336 aaKnown RBP13.11□□□□□ -0.31
PCDHGA8-201ENST00000398604 MYL10Q9BUA6 226 aa13.11□□□□□ -0.31
PCDHGA8-201ENST00000398604 PRR36Q9H6K5 1346 aa13.11□□□□□ -0.31
PCDHGA8-201ENST00000398604 MYOM1P52179 1685 aa13.11□□□□□ -0.31
PCDHGA8-201ENST00000398604 KCNQ3O43525 872 aa13.11□□□□□ -0.31
PCDHGA8-201ENST00000398604 NF2P35240 595 aa13.11□□□□□ -0.31
PCDHGA8-201ENST00000398604 ZNF174Q15697 407 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms