RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 C8orf76Q96K31 380 aa21.43■■□□□ 1.02
CHRFAM7A-202ENST00000397827 TAOK2Q9UL54 1235 aa21.43■■□□□ 1.02
CHRFAM7A-202ENST00000397827 SLIT2O94813 1529 aa21.43■■□□□ 1.02
CHRFAM7A-202ENST00000397827 CPLX1O14810 134 aa21.42■■□□□ 1.02
CHRFAM7A-202ENST00000397827 PDE6AP16499 860 aa21.42■■□□□ 1.02
CHRFAM7A-202ENST00000397827 SNW1Q13573 536 aaKnown RBP21.42■■□□□ 1.02
CHRFAM7A-202ENST00000397827 A0A087WWV3 80 aa21.42■■□□□ 1.02
CHRFAM7A-202ENST00000397827 TRDNQ13061 729 aa21.42■■□□□ 1.02
CHRFAM7A-202ENST00000397827 PUM3Q15397 648 aaKnown RBP21.42■■□□□ 1.02
CHRFAM7A-202ENST00000397827 SEC31BQ9NQW1 1179 aa21.42■■□□□ 1.02
CHRFAM7A-202ENST00000397827 RXRAP19793 462 aa21.42■■□□□ 1.02
CHRFAM7A-202ENST00000397827 CYB5R4Q7L1T6 521 aa21.42■■□□□ 1.02
CHRFAM7A-202ENST00000397827 LPIN2Q92539 896 aa21.42■■□□□ 1.02
CHRFAM7A-202ENST00000397827 CHMP4CQ96CF2 233 aa21.42■■□□□ 1.02
CHRFAM7A-202ENST00000397827 COL14A1Q05707 1796 aaKnown RBP21.41■■□□□ 1.02
CHRFAM7A-202ENST00000397827 DHX16O60231 1041 aaKnown RBP21.41■■□□□ 1.02
CHRFAM7A-202ENST00000397827 ARID4AP29374 1257 aaPredicted RBP21.41■■□□□ 1.02
CHRFAM7A-202ENST00000397827 UBE3CQ15386 1083 aa21.41■■□□□ 1.02
CHRFAM7A-202ENST00000397827 CCDC73Q6ZRK6 1079 aa21.41■■□□□ 1.02
CHRFAM7A-202ENST00000397827 ERCC4Q92889 916 aaPredicted RBP21.41■■□□□ 1.02
CHRFAM7A-202ENST00000397827 INCENPQ9NQS7 918 aa21.41■■□□□ 1.02
CHRFAM7A-202ENST00000397827 FGFR2P21802 821 aa21.4■■□□□ 1.02
CHRFAM7A-202ENST00000397827 EIF5P55010 431 aaKnown RBP21.4■■□□□ 1.02
CHRFAM7A-202ENST00000397827 FSIP1Q8NA03 581 aa21.4■■□□□ 1.02
CHRFAM7A-202ENST00000397827 PCDHA7Q9UN72 937 aa21.4■■□□□ 1.02
CHRFAM7A-202ENST00000397827 ADAMTS2O95450 1211 aa21.4■■□□□ 1.02
CHRFAM7A-202ENST00000397827 ATL3Q6DD88 541 aa21.4■■□□□ 1.02
CHRFAM7A-202ENST00000397827 INTS5Q6P9B9 1019 aaKnown RBP21.4■■□□□ 1.02
CHRFAM7A-202ENST00000397827 FBXO18Q8NFZ0 1043 aa21.4■■□□□ 1.02
CHRFAM7A-202ENST00000397827 SENP2Q9HC62 589 aa21.4■■□□□ 1.02
CHRFAM7A-202ENST00000397827 PYCARDQ9ULZ3 195 aa21.4■■□□□ 1.02
CHRFAM7A-202ENST00000397827 CLIC4Q9Y696 253 aa21.4■■□□□ 1.02
CHRFAM7A-202ENST00000397827 TCRBV5S4A2TA0A5A2 114 aa21.39■■□□□ 1.02
CHRFAM7A-202ENST00000397827 B4E1Z4 1266 aa21.39■■□□□ 1.02
CHRFAM7A-202ENST00000397827 ENGASEQ8NFI3 743 aa21.39■■□□□ 1.02
CHRFAM7A-202ENST00000397827 AIDAQ96BJ3 306 aa21.39■■□□□ 1.02
CHRFAM7A-202ENST00000397827 TRIM5Q9C035 493 aa21.39■■□□□ 1.02
CHRFAM7A-202ENST00000397827 UQCRFS1P1P0C7P4 283 aa21.39■■□□□ 1.01
CHRFAM7A-202ENST00000397827 ATP6V1AP38606 617 aa21.39■■□□□ 1.01
CHRFAM7A-202ENST00000397827 C11orf57Q6ZUT1 292 aaPredicted RBP21.39■■□□□ 1.01
CHRFAM7A-202ENST00000397827 SPATA5Q8NB90 893 aa21.39■■□□□ 1.01
CHRFAM7A-202ENST00000397827 TDRD7Q8NHU6 1098 aaKnown RBP21.39■■□□□ 1.01
CHRFAM7A-202ENST00000397827 MROH5Q6ZUA9 1318 aa21.39■■□□□ 1.01
CHRFAM7A-202ENST00000397827 KINO60870 393 aaKnown RBP21.38■■□□□ 1.01
CHRFAM7A-202ENST00000397827 PTGS1P23219 599 aa21.38■■□□□ 1.01
CHRFAM7A-202ENST00000397827 CBX1P83916 185 aa21.38■■□□□ 1.01
CHRFAM7A-202ENST00000397827 FAM160A1Q05DH4 1040 aa21.38■■□□□ 1.01
CHRFAM7A-202ENST00000397827 RASGRF1Q13972 1273 aa21.38■■□□□ 1.01
CHRFAM7A-202ENST00000397827 AIFM3Q96NN9 605 aa21.38■■□□□ 1.01
CHRFAM7A-202ENST00000397827 MPHOSPH8Q99549 860 aa21.38■■□□□ 1.01
CHRFAM7A-202ENST00000397827 TMEM51Q9NW97 253 aa21.38■■□□□ 1.01
CHRFAM7A-202ENST00000397827 ANGEL1Q9UNK9 670 aaKnown RBP21.38■■□□□ 1.01
CHRFAM7A-202ENST00000397827 CRKLP46109 303 aaKnown RBP21.38■■□□□ 1.01
CHRFAM7A-202ENST00000397827 MAGEB6Q8N7X4 407 aa21.38■■□□□ 1.01
CHRFAM7A-202ENST00000397827 STRBPQ96SI9 672 aaKnown RBP21.38■■□□□ 1.01
CHRFAM7A-202ENST00000397827 DOT1LQ8TEK3 1739 aa21.38■■□□□ 1.01
CHRFAM7A-202ENST00000397827 ATRNO75882 1429 aa21.38■■□□□ 1.01
CHRFAM7A-202ENST00000397827 A0A1B0GVL5 298 aa21.37■■□□□ 1.01
CHRFAM7A-202ENST00000397827 GOLGA6L6A8MZA4 724 aa21.37■■□□□ 1.01
CHRFAM7A-202ENST00000397827 KIF28PB7ZC32 967 aa21.37■■□□□ 1.01
CHRFAM7A-202ENST00000397827 KIF20AO95235 890 aa21.37■■□□□ 1.01
CHRFAM7A-202ENST00000397827 DRC7Q8IY82 874 aa21.37■■□□□ 1.01
CHRFAM7A-202ENST00000397827 CCDC144CPQ8IYA2 1237 aa21.37■■□□□ 1.01
CHRFAM7A-202ENST00000397827 GTPBP4Q9BZE4 634 aaKnown RBP21.37■■□□□ 1.01
CHRFAM7A-202ENST00000397827 CCDC87Q9NVE4 849 aa21.37■■□□□ 1.01
CHRFAM7A-202ENST00000397827 RTEL1Q9NZ71 1219 aa21.37■■□□□ 1.01
CHRFAM7A-202ENST00000397827 NRBP1Q9UHY1 535 aa21.37■■□□□ 1.01
CHRFAM7A-202ENST00000397827 NEDD4P46934 1319 aa21.37■■□□□ 1.01
CHRFAM7A-202ENST00000397827 SLC5A1P13866 664 aa21.36■■□□□ 1.01
CHRFAM7A-202ENST00000397827 LINC00301Q8NCQ3 95 aa21.36■■□□□ 1.01
CHRFAM7A-202ENST00000397827 FBXW7Q969H0 707 aa21.36■■□□□ 1.01
CHRFAM7A-202ENST00000397827 COL16A1Q07092 1604 aaPredicted RBP21.36■■□□□ 1.01
CHRFAM7A-202ENST00000397827 STK38Q15208 465 aa21.36■■□□□ 1.01
CHRFAM7A-202ENST00000397827 SF3A1Q15459 793 aaKnown RBP21.36■■□□□ 1.01
CHRFAM7A-202ENST00000397827 DDB1Q16531 1140 aa21.36■■□□□ 1.01
CHRFAM7A-202ENST00000397827 IPO4Q8TEX9 1081 aaKnown RBP21.36■■□□□ 1.01
CHRFAM7A-202ENST00000397827 UTP14AQ9BVJ6 771 aaKnown RBP21.36■■□□□ 1.01
CHRFAM7A-202ENST00000397827 WDR19Q8NEZ3 1342 aa21.36■■□□□ 1.01
CHRFAM7A-202ENST00000397827 SH2B2O14492 632 aaPredicted RBP21.36■■□□□ 1.01
CHRFAM7A-202ENST00000397827 CTAGE5O15320 804 aa21.36■■□□□ 1.01
CHRFAM7A-202ENST00000397827 METAP2P50579 478 aaKnown RBP eCLIP21.36■■□□□ 1.01
CHRFAM7A-202ENST00000397827 ZNF75DP51815 510 aa21.36■■□□□ 1.01
CHRFAM7A-202ENST00000397827 CCDC186Q7Z3E2 898 aa21.36■■□□□ 1.01
CHRFAM7A-202ENST00000397827 MICU3Q86XE3 530 aa21.36■■□□□ 1.01
CHRFAM7A-202ENST00000397827 KIAA1524Q8TCG1 905 aa21.36■■□□□ 1.01
CHRFAM7A-202ENST00000397827 EPB41L4AQ9HCS5 686 aaPredicted RBP21.36■■□□□ 1.01
CHRFAM7A-202ENST00000397827 MBD4O95243 580 aa21.35■■□□□ 1.01
CHRFAM7A-202ENST00000397827 MYSM1Q5VVJ2 828 aa21.35■■□□□ 1.01
CHRFAM7A-202ENST00000397827 PLA2G4DQ86XP0 818 aa21.35■■□□□ 1.01
CHRFAM7A-202ENST00000397827 MRPS27Q92552 414 aaKnown RBP21.35■■□□□ 1.01
CHRFAM7A-202ENST00000397827 ARMT1Q9H993 441 aa21.35■■□□□ 1.01
CHRFAM7A-202ENST00000397827 DDX60Q8IY21 1712 aaKnown RBP21.35■■□□□ 1.01
CHRFAM7A-202ENST00000397827 CDC27P30260 824 aa21.35■■□□□ 1.01
CHRFAM7A-202ENST00000397827 CTDSPL2Q05D32 466 aa21.35■■□□□ 1.01
CHRFAM7A-202ENST00000397827 ITPK1Q13572 414 aa21.35■■□□□ 1.01
CHRFAM7A-202ENST00000397827 IQCB1Q15051 598 aa21.35■■□□□ 1.01
CHRFAM7A-202ENST00000397827 ADALQ6DHV7 355 aa21.35■■□□□ 1.01
CHRFAM7A-202ENST00000397827 PHKBQ93100 1093 aa21.35■■□□□ 1.01
CHRFAM7A-202ENST00000397827 MYL10Q9BUA6 226 aa21.35■■□□□ 1.01
CHRFAM7A-202ENST00000397827 VGLL3A8MV65 326 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms