RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 RALYLQ86SE5 291 aaKnown RBP6.26□□□□□ -1.41
PTPRD-205ENST00000397611 FMR1NBQ8N0W7 255 aaPredicted RBP6.26□□□□□ -1.41
PTPRD-205ENST00000397611 PYM1Q9BRP8 204 aaKnown RBP6.26□□□□□ -1.41
PTPRD-205ENST00000397611 CAMTA1Q9Y6Y1 1673 aa6.26□□□□□ -1.41
PTPRD-205ENST00000397611 ARHGAP6O43182 974 aa6.26□□□□□ -1.41
PTPRD-205ENST00000397611 SF3B2Q13435 895 aaKnown RBP6.26□□□□□ -1.41
PTPRD-205ENST00000397611 TTF1Q15361 905 aaPredicted RBP6.26□□□□□ -1.41
PTPRD-205ENST00000397611 UBE3BQ7Z3V4 1068 aa6.26□□□□□ -1.41
PTPRD-205ENST00000397611 TMTC2Q8N394 836 aa6.26□□□□□ -1.41
PTPRD-205ENST00000397611 CACTINQ8WUQ7 758 aaKnown RBP6.26□□□□□ -1.41
PTPRD-205ENST00000397611 IVLP07476 585 aa6.25□□□□□ -1.41
PTPRD-205ENST00000397611 CAPN2P17655 700 aa6.25□□□□□ -1.41
PTPRD-205ENST00000397611 HMGB2P26583 209 aaKnown RBP6.25□□□□□ -1.41
PTPRD-205ENST00000397611 ERCC5P28715 1186 aaPredicted RBP6.25□□□□□ -1.41
PTPRD-205ENST00000397611 PGBD1Q96JS3 809 aa6.25□□□□□ -1.41
PTPRD-205ENST00000397611 DBNDD2Q9BQY9 259 aa6.25□□□□□ -1.41
PTPRD-205ENST00000397611 DNAI1Q9UI46 699 aa6.25□□□□□ -1.41
PTPRD-205ENST00000397611 CCDC196A0A1B0GTZ2 297 aa6.25□□□□□ -1.41
PTPRD-205ENST00000397611 PIP4K2AP48426 406 aaPredicted RBP6.25□□□□□ -1.41
PTPRD-205ENST00000397611 KIF4BQ2VIQ3 1234 aa6.25□□□□□ -1.41
PTPRD-205ENST00000397611 KANK3Q6NY19 840 aa6.25□□□□□ -1.41
PTPRD-205ENST00000397611 IMMTQ16891 758 aaKnown RBP6.25□□□□□ -1.41
PTPRD-205ENST00000397611 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.25□□□□□ -1.41
PTPRD-205ENST00000397611 CWC25Q9NXE8 425 aaPredicted RBP6.25□□□□□ -1.41
PTPRD-205ENST00000397611 VPS18Q9P253 973 aa6.25□□□□□ -1.41
PTPRD-205ENST00000397611 A0A1B0GUL7 405 aa6.25□□□□□ -1.41
PTPRD-205ENST00000397611 LMBR1LQ6UX01 489 aa6.25□□□□□ -1.41
PTPRD-205ENST00000397611 USP28Q96RU2 1077 aa6.25□□□□□ -1.41
PTPRD-205ENST00000397611 DACH1Q9UI36 760 aa6.25□□□□□ -1.41
PTPRD-205ENST00000397611 SPTLC2O15270 562 aa6.25□□□□□ -1.41
PTPRD-205ENST00000397611 PCCAP05165 728 aaPredicted RBP6.25□□□□□ -1.41
PTPRD-205ENST00000397611 SPAG1Q07617 926 aa6.25□□□□□ -1.41
PTPRD-205ENST00000397611 TRDNQ13061 729 aa6.25□□□□□ -1.41
PTPRD-205ENST00000397611 ZNF526Q8TF50 670 aaPredicted RBP6.25□□□□□ -1.41
PTPRD-205ENST00000397611 FAM107BQ9H098 131 aa6.25□□□□□ -1.41
PTPRD-205ENST00000397611 CCDC8Q9H0W5 538 aaPredicted RBP6.25□□□□□ -1.41
PTPRD-205ENST00000397611 PAG1Q9NWQ8 432 aa6.25□□□□□ -1.41
PTPRD-205ENST00000397611 TFIP11Q9UBB9 837 aaKnown RBP6.25□□□□□ -1.41
PTPRD-205ENST00000397611 PPP6R2O75170 966 aa6.25□□□□□ -1.41
PTPRD-205ENST00000397611 UQCRFS1P1P0C7P4 283 aa6.25□□□□□ -1.41
PTPRD-205ENST00000397611 TDO2P48775 406 aa6.25□□□□□ -1.41
PTPRD-205ENST00000397611 SAFBQ15424 915 aaKnown RBP eCLIP6.25□□□□□ -1.41
PTPRD-205ENST00000397611 NID2Q14112 1375 aa6.25□□□□□ -1.41
PTPRD-205ENST00000397611 TOP1P11387 765 aaKnown RBP6.25□□□□□ -1.41
PTPRD-205ENST00000397611 RILPL1Q5EBL4 403 aa6.25□□□□□ -1.41
PTPRD-205ENST00000397611 ISCA1Q9BUE6 129 aa6.25□□□□□ -1.41
PTPRD-205ENST00000397611 DNAJC25Q9H1X3 360 aa6.25□□□□□ -1.41
PTPRD-205ENST00000397611 PA2G4Q9UQ80 394 aaKnown RBP6.25□□□□□ -1.41
PTPRD-205ENST00000397611 SLC3A2P08195 630 aaKnown RBP6.24□□□□□ -1.41
PTPRD-205ENST00000397611 HSPD1P10809 573 aaKnown RBP6.24□□□□□ -1.41
PTPRD-205ENST00000397611 PCP11498 1178 aaKnown RBP6.24□□□□□ -1.41
PTPRD-205ENST00000397611 ELF2Q15723 593 aa6.24□□□□□ -1.41
PTPRD-205ENST00000397611 PROSER3Q2NL68 480 aa6.24□□□□□ -1.41
PTPRD-205ENST00000397611 ODF2Q5BJF6 829 aa6.24□□□□□ -1.41
PTPRD-205ENST00000397611 ESCO1Q5FWF5 840 aa6.24□□□□□ -1.41
PTPRD-205ENST00000397611 NCOA7Q8NI08 942 aa6.24□□□□□ -1.41
PTPRD-205ENST00000397611 RBM33Q96EV2 1170 aaKnown RBP6.24□□□□□ -1.41
PTPRD-205ENST00000397611 C8orf76Q96K31 380 aa6.24□□□□□ -1.41
PTPRD-205ENST00000397611 WDR17Q8IZU2 1322 aa6.24□□□□□ -1.41
PTPRD-205ENST00000397611 KIF5CO60282 957 aa6.24□□□□□ -1.41
PTPRD-205ENST00000397611 MARCH6O60337 910 aa6.24□□□□□ -1.41
PTPRD-205ENST00000397611 IFNAR1P17181 557 aa6.24□□□□□ -1.41
PTPRD-205ENST00000397611 PDIA3P30101 505 aaKnown RBP6.24□□□□□ -1.41
PTPRD-205ENST00000397611 LRRC8AQ8IWT6 810 aa6.24□□□□□ -1.41
PTPRD-205ENST00000397611 NECAB1Q8N987 351 aa6.24□□□□□ -1.41
PTPRD-205ENST00000397611 ZNF579Q8NAF0 562 aaKnown RBP6.24□□□□□ -1.41
PTPRD-205ENST00000397611 MLKLQ8NB16 471 aa6.24□□□□□ -1.41
PTPRD-205ENST00000397611 CCDC47Q96A33 483 aaKnown RBP6.24□□□□□ -1.41
PTPRD-205ENST00000397611 PYCARDQ9ULZ3 195 aa6.24□□□□□ -1.41
PTPRD-205ENST00000397611 HPSEQ9Y251 543 aa6.24□□□□□ -1.41
PTPRD-205ENST00000397611 BIN1O00499 593 aa6.24□□□□□ -1.41
PTPRD-205ENST00000397611 KCNQ3O43525 872 aa6.24□□□□□ -1.41
PTPRD-205ENST00000397611 GNG11P61952 73 aa6.24□□□□□ -1.41
PTPRD-205ENST00000397611 MYL5Q02045 173 aa6.24□□□□□ -1.41
PTPRD-205ENST00000397611 CTR9Q6PD62 1173 aa6.24□□□□□ -1.41
PTPRD-205ENST00000397611 LUZP1Q86V48 1076 aa6.24□□□□□ -1.41
PTPRD-205ENST00000397611 CCDC148Q8NFR7 591 aa6.24□□□□□ -1.41
PTPRD-205ENST00000397611 SIL1Q9H173 461 aa6.24□□□□□ -1.41
PTPRD-205ENST00000397611 KCNF1Q9H3M0 494 aa6.24□□□□□ -1.41
PTPRD-205ENST00000397611 CCDC69A6NI79 296 aa6.24□□□□□ -1.41
PTPRD-205ENST00000397611 WASHC4Q2M389 1173 aa6.24□□□□□ -1.41
PTPRD-205ENST00000397611 CCDC158Q5M9N0 1113 aa6.24□□□□□ -1.41
PTPRD-205ENST00000397611 SYT10Q6XYQ8 523 aa6.24□□□□□ -1.41
PTPRD-205ENST00000397611 ZNF710Q8N1W2 664 aa6.24□□□□□ -1.41
PTPRD-205ENST00000397611 NEUROD6Q96NK8 337 aa6.24□□□□□ -1.41
PTPRD-205ENST00000397611 ZNF609O15014 1411 aa6.24□□□□□ -1.41
PTPRD-205ENST00000397611 SEMA3EO15041 775 aa6.24□□□□□ -1.41
PTPRD-205ENST00000397611 FSIP1Q8NA03 581 aa6.24□□□□□ -1.41
PTPRD-205ENST00000397611 CCDC12Q8WUD4 166 aaPredicted RBP6.24□□□□□ -1.41
PTPRD-205ENST00000397611 CPLX3Q8WVH0 158 aa6.24□□□□□ -1.41
PTPRD-205ENST00000397611 CHAMP1Q96JM3 812 aa6.24□□□□□ -1.41
PTPRD-205ENST00000397611 NLRP2Q9NX02 1062 aa6.24□□□□□ -1.41
PTPRD-205ENST00000397611 GOLGA6L7A0A1B0GV03 622 aa6.24□□□□□ -1.41
PTPRD-205ENST00000397611 NCBP1Q09161 790 aaKnown RBP6.24□□□□□ -1.41
PTPRD-205ENST00000397611 MCM6Q14566 821 aa6.24□□□□□ -1.41
PTPRD-205ENST00000397611 TMX4Q9H1E5 349 aaPredicted RBP6.24□□□□□ -1.41
PTPRD-205ENST00000397611 RAI14Q9P0K7 980 aa6.24□□□□□ -1.41
PTPRD-205ENST00000397611 MAST3O60307 1309 aa6.24□□□□□ -1.41
PTPRD-205ENST00000397611 PHLPP2Q6ZVD8 1323 aa6.24□□□□□ -1.41
PTPRD-205ENST00000397611 TUBGCP6Q96RT7 1819 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms