RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 MX2P20592 715 aa11.55□□□□□ -0.56
COL4A4-201ENST00000396625 VPS41P49754 854 aa11.55□□□□□ -0.56
COL4A4-201ENST00000396625 AFG3L2Q9Y4W6 797 aa11.55□□□□□ -0.56
COL4A4-201ENST00000396625 RTN1Q16799 776 aa11.55□□□□□ -0.56
COL4A4-201ENST00000396625 BANK1Q8NDB2 785 aa11.55□□□□□ -0.56
COL4A4-201ENST00000396625 IFNKQ9P0W0 207 aa11.55□□□□□ -0.56
COL4A4-201ENST00000396625 AKNAD1Q5T1N1 836 aa11.55□□□□□ -0.56
COL4A4-201ENST00000396625 PDZD8Q8NEN9 1154 aa11.55□□□□□ -0.56
COL4A4-201ENST00000396625 PPP4R1Q8TF05 950 aa11.55□□□□□ -0.56
COL4A4-201ENST00000396625 SPDL1Q96EA4 605 aa11.55□□□□□ -0.56
COL4A4-201ENST00000396625 MYD88Q99836 296 aa11.55□□□□□ -0.56
COL4A4-201ENST00000396625 DDX21Q9NR30 783 aaKnown RBP eCLIP11.55□□□□□ -0.56
COL4A4-201ENST00000396625 CTNND2Q9UQB3 1225 aa11.55□□□□□ -0.56
COL4A4-201ENST00000396625 BAG1Q99933 345 aaPredicted RBP11.55□□□□□ -0.56
COL4A4-201ENST00000396625 KRT23Q9C075 422 aa11.55□□□□□ -0.56
COL4A4-201ENST00000396625 RIPOR2Q9Y4F9 1068 aa11.55□□□□□ -0.56
COL4A4-201ENST00000396625 RAPGEF1Q13905 1077 aa11.55□□□□□ -0.56
COL4A4-201ENST00000396625 PSPC1Q8WXF1 523 aaKnown RBP11.55□□□□□ -0.56
COL4A4-201ENST00000396625 RILPQ96NA2 401 aa11.55□□□□□ -0.56
COL4A4-201ENST00000396625 NEK1Q96PY6 1258 aa11.55□□□□□ -0.56
COL4A4-201ENST00000396625 RABEP2Q9H5N1 569 aa11.55□□□□□ -0.56
COL4A4-201ENST00000396625 C6orf50Q9HD87 102 aa11.55□□□□□ -0.56
COL4A4-201ENST00000396625 PPP2R5CQ13362 524 aa11.55□□□□□ -0.56
COL4A4-201ENST00000396625 NFE2L2Q16236 605 aa11.55□□□□□ -0.56
COL4A4-201ENST00000396625 ATP2B3Q16720 1220 aa11.55□□□□□ -0.56
COL4A4-201ENST00000396625 ALDH1L2Q3SY69 923 aa11.55□□□□□ -0.56
COL4A4-201ENST00000396625 CCT6AP40227 531 aaKnown RBP11.54□□□□□ -0.56
COL4A4-201ENST00000396625 ATP2A3Q93084 1043 aa11.54□□□□□ -0.56
COL4A4-201ENST00000396625 PTPRGP23470 1445 aa11.54□□□□□ -0.56
COL4A4-201ENST00000396625 AKR1B15C9JRZ8 316 aaPredicted RBP11.54□□□□□ -0.56
COL4A4-201ENST00000396625 RPAINQ86UA6 219 aa11.54□□□□□ -0.56
COL4A4-201ENST00000396625 THEGQ9P2T0 379 aa11.54□□□□□ -0.56
COL4A4-201ENST00000396625 RTEL1-TNFRSF6BF6WH68 1400 aa11.54□□□□□ -0.56
COL4A4-201ENST00000396625 ALG1Q9BT22 464 aa11.54□□□□□ -0.56
COL4A4-201ENST00000396625 CCDC8Q9H0W5 538 aaPredicted RBP11.54□□□□□ -0.56
COL4A4-201ENST00000396625 AMOTQ4VCS5 1084 aa11.54□□□□□ -0.56
COL4A4-201ENST00000396625 RUFY4Q6ZNE9 571 aa11.54□□□□□ -0.56
COL4A4-201ENST00000396625 ARHGAP42A6NI28 874 aa11.54□□□□□ -0.56
COL4A4-201ENST00000396625 SDCCAG3Q96C92 435 aa11.54□□□□□ -0.56
COL4A4-201ENST00000396625 STX8Q9UNK0 236 aa11.54□□□□□ -0.56
COL4A4-201ENST00000396625 KRT3P12035 628 aa11.54□□□□□ -0.56
COL4A4-201ENST00000396625 PHLDB3Q6NSJ2 640 aa11.54□□□□□ -0.56
COL4A4-201ENST00000396625 CLSTN2Q9H4D0 955 aa11.54□□□□□ -0.56
COL4A4-201ENST00000396625 XRCC6P12956 609 aaKnown RBP eCLIP11.54□□□□□ -0.56
COL4A4-201ENST00000396625 FAN1Q9Y2M0 1017 aa11.54□□□□□ -0.56
COL4A4-201ENST00000396625 CFTRP13569 1480 aa11.53□□□□□ -0.56
COL4A4-201ENST00000396625 STAG1Q8WVM7 1258 aa11.53□□□□□ -0.56
COL4A4-201ENST00000396625 ZBTB43O43298 467 aa11.53□□□□□ -0.56
COL4A4-201ENST00000396625 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.53□□□□□ -0.56
COL4A4-201ENST00000396625 NAPAP54920 295 aa11.53□□□□□ -0.56
COL4A4-201ENST00000396625 CASC4Q6P4E1 433 aa11.53□□□□□ -0.56
COL4A4-201ENST00000396625 MGARPQ8TDB4 240 aa11.53□□□□□ -0.56
COL4A4-201ENST00000396625 DHX58Q96C10 678 aa11.53□□□□□ -0.56
COL4A4-201ENST00000396625 CRNKL1Q9BZJ0 848 aaKnown RBP11.53□□□□□ -0.56
COL4A4-201ENST00000396625 STX10O60499 249 aa11.53□□□□□ -0.56
COL4A4-201ENST00000396625 PPP2R5DQ14738 602 aa11.53□□□□□ -0.56
COL4A4-201ENST00000396625 DBN1Q16643 649 aa11.53□□□□□ -0.56
COL4A4-201ENST00000396625 ERO1AQ96HE7 468 aa11.53□□□□□ -0.56
COL4A4-201ENST00000396625 JPH4Q96JJ6 628 aa11.53□□□□□ -0.56
COL4A4-201ENST00000396625 KRT9P35527 623 aa11.53□□□□□ -0.56
COL4A4-201ENST00000396625 GABPB1Q06547 395 aaPredicted RBP11.53□□□□□ -0.56
COL4A4-201ENST00000396625 VTI1AQ96AJ9 217 aa11.53□□□□□ -0.56
COL4A4-201ENST00000396625 TMOD3Q9NYL9 352 aa11.53□□□□□ -0.56
COL4A4-201ENST00000396625 LRPPRCP42704 1394 aaKnown RBP11.53□□□□□ -0.56
COL4A4-201ENST00000396625 FRMD3A2A2Y4 597 aa11.53□□□□□ -0.56
COL4A4-201ENST00000396625 TMPOP42166 694 aaKnown RBP11.53□□□□□ -0.56
COL4A4-201ENST00000396625 RNASE9P60153 205 aaKnown RBP11.53□□□□□ -0.56
COL4A4-201ENST00000396625 PPME1Q9Y570 386 aa11.53□□□□□ -0.56
COL4A4-201ENST00000396625 PPARDQ03181 441 aa11.52□□□□□ -0.56
COL4A4-201ENST00000396625 NOX5Q96PH1 765 aa11.52□□□□□ -0.56
COL4A4-201ENST00000396625 FGD5Q6ZNL6 1462 aa11.52□□□□□ -0.56
COL4A4-201ENST00000396625 U2AF2P26368 475 aaKnown RBP eCLIP11.52□□□□□ -0.56
COL4A4-201ENST00000396625 CABP5Q9NP86 173 aa11.52□□□□□ -0.56
COL4A4-201ENST00000396625 HAUS2Q9NVX0 235 aa11.52□□□□□ -0.56
COL4A4-201ENST00000396625 BAIAP2L1Q9UHR4 511 aa11.52□□□□□ -0.56
COL4A4-201ENST00000396625 PPP1R9AQ9ULJ8 1098 aa11.52□□□□□ -0.56
COL4A4-201ENST00000396625 CAMSAP2Q08AD1 1489 aa11.52□□□□□ -0.56
COL4A4-201ENST00000396625 TTC22Q5TAA0 569 aa11.52□□□□□ -0.56
COL4A4-201ENST00000396625 HS2ST1Q7LGA3 356 aa11.52□□□□□ -0.56
COL4A4-201ENST00000396625 KRT2P35908 639 aa11.52□□□□□ -0.57
COL4A4-201ENST00000396625 ATP6V1E1P36543 226 aa11.52□□□□□ -0.57
COL4A4-201ENST00000396625 MAP3K7CLP57077 242 aa11.52□□□□□ -0.57
COL4A4-201ENST00000396625 GSTO1P78417 241 aa11.52□□□□□ -0.57
COL4A4-201ENST00000396625 BMP2KLQ5H9B9 411 aa11.52□□□□□ -0.57
COL4A4-201ENST00000396625 RTL9Q8NET4 1388 aa11.52□□□□□ -0.57
COL4A4-201ENST00000396625 HIP1RO75146 1068 aa11.52□□□□□ -0.57
COL4A4-201ENST00000396625 TBC1D8O95759 1140 aa11.52□□□□□ -0.57
COL4A4-201ENST00000396625 EPB41P11171 864 aaKnown RBP11.52□□□□□ -0.57
COL4A4-201ENST00000396625 SLC8A1P32418 973 aa11.52□□□□□ -0.57
COL4A4-201ENST00000396625 TBC1D32Q96NH3 1257 aa11.52□□□□□ -0.57
COL4A4-201ENST00000396625 ORC6Q9Y5N6 252 aa11.52□□□□□ -0.57
COL4A4-201ENST00000396625 CUL7Q14999 1698 aa11.52□□□□□ -0.57
COL4A4-201ENST00000396625 SPDYE3A6NKU9 549 aa11.52□□□□□ -0.57
COL4A4-201ENST00000396625 WDR44Q5JSH3 913 aa11.52□□□□□ -0.57
COL4A4-201ENST00000396625 CNNM2Q9H8M5 875 aa11.52□□□□□ -0.57
COL4A4-201ENST00000396625 KLF18A0A0U1RQI7 1052 aa11.52□□□□□ -0.57
COL4A4-201ENST00000396625 MTMR3Q13615 1198 aa11.52□□□□□ -0.57
COL4A4-201ENST00000396625 PLS1Q14651 629 aa11.52□□□□□ -0.57
COL4A4-201ENST00000396625 CYP26C1Q6V0L0 522 aa11.52□□□□□ -0.57
COL4A4-201ENST00000396625 CABS1Q96KC9 395 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms