RNA–Protein interactions for RNA: ENST00000394828.6

PPP3CB-203, Transcript of protein phosphatase 3 catalytic subunit beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP3CB, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CB-203ENST00000394828 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.88□□□□□ -0.19
PPP3CB-203ENST00000394828 PAG1Q9NWQ8 432 aa13.88□□□□□ -0.19
PPP3CB-203ENST00000394828 GOLIM4O00461 696 aa13.87□□□□□ -0.19
PPP3CB-203ENST00000394828 PDE8BO95263 885 aa13.87□□□□□ -0.19
PPP3CB-203ENST00000394828 MCCP23508 829 aa13.87□□□□□ -0.19
PPP3CB-203ENST00000394828 IFIT1P09914 478 aaKnown RBP13.87□□□□□ -0.19
PPP3CB-203ENST00000394828 CAMK4Q16566 473 aa13.87□□□□□ -0.19
PPP3CB-203ENST00000394828 KBTBD3Q8NAB2 608 aa13.87□□□□□ -0.19
PPP3CB-203ENST00000394828 CCDC171Q6TFL3 1326 aa13.87□□□□□ -0.19
PPP3CB-203ENST00000394828 FGFR2P21802 821 aa13.86□□□□□ -0.19
PPP3CB-203ENST00000394828 CYP2C19P33261 490 aa13.86□□□□□ -0.19
PPP3CB-203ENST00000394828 SLFNL1Q499Z3 407 aa13.86□□□□□ -0.19
PPP3CB-203ENST00000394828 RASEFQ8IZ41 740 aa13.86□□□□□ -0.19
PPP3CB-203ENST00000394828 HELBQ8NG08 1087 aaPredicted RBP13.86□□□□□ -0.19
PPP3CB-203ENST00000394828 TRMT1Q9NXH9 659 aaKnown RBP13.86□□□□□ -0.19
PPP3CB-203ENST00000394828 SNX14Q9Y5W7 946 aa13.86□□□□□ -0.19
PPP3CB-203ENST00000394828 MROH5Q6ZUA9 1318 aa13.86□□□□□ -0.19
PPP3CB-203ENST00000394828 ST5P78524 1137 aa13.86□□□□□ -0.19
PPP3CB-203ENST00000394828 PROM2Q8N271 834 aa13.86□□□□□ -0.19
PPP3CB-203ENST00000394828 KCNG1Q9UIX4 513 aa13.86□□□□□ -0.19
PPP3CB-203ENST00000394828 SLC10A5Q5PT55 438 aa13.86□□□□□ -0.19
PPP3CB-203ENST00000394828 ZNF397Q8NF99 534 aaPredicted RBP13.86□□□□□ -0.19
PPP3CB-203ENST00000394828 ZCCHC17Q9NP64 241 aaKnown RBP13.86□□□□□ -0.19
PPP3CB-203ENST00000394828 SF3B3Q15393 1217 aaKnown RBP13.85□□□□□ -0.19
PPP3CB-203ENST00000394828 SLC27A3Q5K4L6 730 aa13.85□□□□□ -0.19
PPP3CB-203ENST00000394828 TTC39AQ5SRH9 613 aa13.85□□□□□ -0.19
PPP3CB-203ENST00000394828 TRAPPC3LQ5T215 181 aa13.85□□□□□ -0.19
PPP3CB-203ENST00000394828 SETDB2Q96T68 719 aa13.85□□□□□ -0.19
PPP3CB-203ENST00000394828 SEC62Q99442 399 aaKnown RBP13.85□□□□□ -0.19
PPP3CB-203ENST00000394828 TNS1Q9HBL0 1735 aaKnown RBP13.85□□□□□ -0.19
PPP3CB-203ENST00000394828 HSP90B1P14625 803 aaKnown RBP13.85□□□□□ -0.19
PPP3CB-203ENST00000394828 CCDC158Q5M9N0 1113 aa13.85□□□□□ -0.19
PPP3CB-203ENST00000394828 PI16Q6UXB8 463 aa13.85□□□□□ -0.19
PPP3CB-203ENST00000394828 SNAP23O00161 211 aa13.84□□□□□ -0.19
PPP3CB-203ENST00000394828 RFC4P35249 363 aa13.84□□□□□ -0.19
PPP3CB-203ENST00000394828 NECTIN1Q15223 517 aa13.84□□□□□ -0.19
PPP3CB-203ENST00000394828 MAP4K1Q92918 833 aa13.84□□□□□ -0.19
PPP3CB-203ENST00000394828 KCNB2Q92953 911 aa13.84□□□□□ -0.19
PPP3CB-203ENST00000394828 TAF5LO75529 589 aa13.84□□□□□ -0.19
PPP3CB-203ENST00000394828 MCAMP43121 646 aa13.84□□□□□ -0.19
PPP3CB-203ENST00000394828 PUM3Q15397 648 aaKnown RBP13.84□□□□□ -0.19
PPP3CB-203ENST00000394828 RNF216Q9NWF9 866 aaPredicted RBP13.84□□□□□ -0.19
PPP3CB-203ENST00000394828 DOCK2Q92608 1830 aa13.84□□□□□ -0.19
PPP3CB-203ENST00000394828 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.84□□□□□ -0.19
PPP3CB-203ENST00000394828 CCDC144BQ3MJ40 725 aa13.84□□□□□ -0.19
PPP3CB-203ENST00000394828 GORABQ5T7V8 394 aa13.84□□□□□ -0.19
PPP3CB-203ENST00000394828 CEP135Q66GS9 1140 aa13.84□□□□□ -0.19
PPP3CB-203ENST00000394828 KRBA2Q6ZNG9 492 aa13.84□□□□□ -0.19
PPP3CB-203ENST00000394828 CCDC129Q6ZRS4 1044 aa13.84□□□□□ -0.19
PPP3CB-203ENST00000394828 CCDC144CPQ8IYA2 1237 aa13.84□□□□□ -0.19
PPP3CB-203ENST00000394828 CCDC24Q8N4L8 307 aa13.84□□□□□ -0.19
PPP3CB-203ENST00000394828 CACTINQ8WUQ7 758 aaKnown RBP13.84□□□□□ -0.19
PPP3CB-203ENST00000394828 MPHOSPH8Q99549 860 aa13.84□□□□□ -0.19
PPP3CB-203ENST00000394828 DHX16O60231 1041 aaKnown RBP13.83□□□□□ -0.2
PPP3CB-203ENST00000394828 ZAP70P43403 619 aa13.83□□□□□ -0.2
PPP3CB-203ENST00000394828 NBPF5PQ86XG9 351 aaPredicted RBP13.83□□□□□ -0.2
PPP3CB-203ENST00000394828 FUCA2Q9BTY2 467 aa13.83□□□□□ -0.2
PPP3CB-203ENST00000394828 NYXQ9GZU5 481 aa13.83□□□□□ -0.2
PPP3CB-203ENST00000394828 RBM8AQ9Y5S9 174 aaKnown RBP13.83□□□□□ -0.2
PPP3CB-203ENST00000394828 NOP2P46087 812 aaKnown RBP13.83□□□□□ -0.2
PPP3CB-203ENST00000394828 FKBP4Q02790 459 aaKnown RBP eCLIP13.83□□□□□ -0.2
PPP3CB-203ENST00000394828 PRPF40BQ6NWY9 871 aaKnown RBP13.83□□□□□ -0.2
PPP3CB-203ENST00000394828 CKAP2LQ8IYA6 745 aa13.83□□□□□ -0.2
PPP3CB-203ENST00000394828 ZNF512BQ96KM6 892 aaPredicted RBP13.83□□□□□ -0.2
PPP3CB-203ENST00000394828 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.83□□□□□ -0.2
PPP3CB-203ENST00000394828 ADRA2BP18089 450 aa13.82□□□□□ -0.2
PPP3CB-203ENST00000394828 IGHMBP2P38935 993 aaKnown RBP13.82□□□□□ -0.2
PPP3CB-203ENST00000394828 PHKA1P46020 1223 aa13.82□□□□□ -0.2
PPP3CB-203ENST00000394828 ERCC6LQ2NKX8 1250 aa13.82□□□□□ -0.2
PPP3CB-203ENST00000394828 ZSCAN25Q6NSZ9 544 aa13.82□□□□□ -0.2
PPP3CB-203ENST00000394828 GPATCH11Q8N954 259 aa13.82□□□□□ -0.2
PPP3CB-203ENST00000394828 LPIN2Q92539 896 aa13.82□□□□□ -0.2
PPP3CB-203ENST00000394828 RGS17Q9UGC6 210 aaPredicted RBP13.82□□□□□ -0.2
PPP3CB-203ENST00000394828 NFIXQ14938 502 aa13.82□□□□□ -0.2
PPP3CB-203ENST00000394828 TXNRD1Q16881 649 aa13.82□□□□□ -0.2
PPP3CB-203ENST00000394828 CCDC102BQ68D86 513 aa13.82□□□□□ -0.2
PPP3CB-203ENST00000394828 ARID4AP29374 1257 aaPredicted RBP13.81□□□□□ -0.2
PPP3CB-203ENST00000394828 CHRNDQ07001 517 aa13.81□□□□□ -0.2
PPP3CB-203ENST00000394828 ADCK5Q3MIX3 580 aa13.81□□□□□ -0.2
PPP3CB-203ENST00000394828 MCMDC2Q4G0Z9 681 aa13.81□□□□□ -0.2
PPP3CB-203ENST00000394828 CARMIL3Q8ND23 1372 aa13.81□□□□□ -0.2
PPP3CB-203ENST00000394828 GTF2A1P52655 376 aaPredicted RBP13.81□□□□□ -0.2
PPP3CB-203ENST00000394828 SART3Q15020 963 aaKnown RBP13.81□□□□□ -0.2
PPP3CB-203ENST00000394828 ZMYM1Q5SVZ6 1142 aa13.81□□□□□ -0.2
PPP3CB-203ENST00000394828 CREB3L3Q68CJ9 461 aa13.81□□□□□ -0.2
PPP3CB-203ENST00000394828 FAM53CQ9NYF3 392 aa13.81□□□□□ -0.2
PPP3CB-203ENST00000394828 TAF6LQ9Y6J9 622 aa13.81□□□□□ -0.2
PPP3CB-203ENST00000394828 GYS1P13807 737 aa13.81□□□□□ -0.2
PPP3CB-203ENST00000394828 PSEN1P49768 467 aa13.81□□□□□ -0.2
PPP3CB-203ENST00000394828 COL9A3Q14050 684 aaPredicted RBP13.81□□□□□ -0.2
PPP3CB-203ENST00000394828 TICAM2Q86XR7 235 aa13.81□□□□□ -0.2
PPP3CB-203ENST00000394828 CELF1Q92879 486 aaKnown RBP13.81□□□□□ -0.2
PPP3CB-203ENST00000394828 CDC5LQ99459 802 aaKnown RBP13.81□□□□□ -0.2
PPP3CB-203ENST00000394828 LAMA4Q16363 1823 aa13.8□□□□□ -0.2
PPP3CB-203ENST00000394828 WTIPA6NIX2 430 aaPredicted RBP13.8□□□□□ -0.2
PPP3CB-203ENST00000394828 TPTE2Q6XPS3 522 aa13.8□□□□□ -0.2
PPP3CB-203ENST00000394828 SMARCE1Q969G3 411 aa13.8□□□□□ -0.2
PPP3CB-203ENST00000394828 TTC14Q96N46 770 aa13.8□□□□□ -0.2
PPP3CB-203ENST00000394828 TRIM5Q9C035 493 aa13.8□□□□□ -0.2
PPP3CB-203ENST00000394828 RASSF4Q9H2L5 321 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms