RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 MYH7P12883 1935 aa11.62□□□□□ -0.55
UBE2D3-208ENST00000394803 GLI3P10071 1580 aa11.62□□□□□ -0.55
UBE2D3-208ENST00000394803 CPDO75976 1380 aa11.62□□□□□ -0.55
UBE2D3-208ENST00000394803 M0R2C6 588 aa11.62□□□□□ -0.55
UBE2D3-208ENST00000394803 ZSCAN12O43309 604 aa11.62□□□□□ -0.55
UBE2D3-208ENST00000394803 GNL2Q13823 731 aaKnown RBP11.62□□□□□ -0.55
UBE2D3-208ENST00000394803 TRIM29Q14134 588 aa11.62□□□□□ -0.55
UBE2D3-208ENST00000394803 BMS1Q14692 1282 aaKnown RBP11.62□□□□□ -0.55
UBE2D3-208ENST00000394803 SLC39A14Q15043 492 aa11.62□□□□□ -0.55
UBE2D3-208ENST00000394803 ZNF771Q7L3S4 317 aaPredicted RBP11.62□□□□□ -0.55
UBE2D3-208ENST00000394803 XPO4Q9C0E2 1151 aaKnown RBP11.62□□□□□ -0.55
UBE2D3-208ENST00000394803 IFNKQ9P0W0 207 aa11.62□□□□□ -0.55
UBE2D3-208ENST00000394803 DACH1Q9UI36 760 aa11.62□□□□□ -0.55
UBE2D3-208ENST00000394803 ZMYM6O95789 1325 aa11.61□□□□□ -0.55
UBE2D3-208ENST00000394803 MAP3K15Q6ZN16 1313 aa11.61□□□□□ -0.55
UBE2D3-208ENST00000394803 CYP27B1O15528 508 aa11.61□□□□□ -0.55
UBE2D3-208ENST00000394803 DPCR1Q3MIW9 517 aa11.61□□□□□ -0.55
UBE2D3-208ENST00000394803 NBPF11Q86T75 865 aa11.61□□□□□ -0.55
UBE2D3-208ENST00000394803 PROSER2Q86WR7 435 aaPredicted RBP11.61□□□□□ -0.55
UBE2D3-208ENST00000394803 WASF1Q92558 559 aa11.61□□□□□ -0.55
UBE2D3-208ENST00000394803 CLIC4Q9Y696 253 aa11.61□□□□□ -0.55
UBE2D3-208ENST00000394803 STRCQ7RTU9 1775 aa11.61□□□□□ -0.55
UBE2D3-208ENST00000394803 FAM237AA0A1B0GTK4 181 aa11.6□□□□□ -0.55
UBE2D3-208ENST00000394803 CCDC66A2RUB6 948 aa11.6□□□□□ -0.55
UBE2D3-208ENST00000394803 USP27XA6NNY8 438 aa11.6□□□□□ -0.55
UBE2D3-208ENST00000394803 PFKFB1P16118 471 aa11.6□□□□□ -0.55
UBE2D3-208ENST00000394803 SYKP43405 635 aa11.6□□□□□ -0.55
UBE2D3-208ENST00000394803 MYL5Q02045 173 aa11.6□□□□□ -0.55
UBE2D3-208ENST00000394803 KIF23Q02241 960 aaPredicted RBP11.6□□□□□ -0.55
UBE2D3-208ENST00000394803 FKBP4Q02790 459 aaKnown RBP eCLIP11.6□□□□□ -0.552e-9■■□□□ 12.2
UBE2D3-208ENST00000394803 TAF7LQ5H9L4 462 aa11.6□□□□□ -0.55
UBE2D3-208ENST00000394803 PPP1R13BQ96KQ4 1090 aa11.6□□□□□ -0.55
UBE2D3-208ENST00000394803 TRMT1Q9NXH9 659 aaKnown RBP11.6□□□□□ -0.55
UBE2D3-208ENST00000394803 TUBE1Q9UJT0 475 aa11.6□□□□□ -0.55
UBE2D3-208ENST00000394803 FANCCQ00597 558 aa11.6□□□□□ -0.55
UBE2D3-208ENST00000394803 ARID5BQ14865 1188 aa11.6□□□□□ -0.55
UBE2D3-208ENST00000394803 OSBP2Q969R2 916 aa11.6□□□□□ -0.55
UBE2D3-208ENST00000394803 CCDC34Q96HJ3 373 aa11.6□□□□□ -0.55
UBE2D3-208ENST00000394803 TMEM87BQ96K49 555 aa11.6□□□□□ -0.55
UBE2D3-208ENST00000394803 ZNF512BQ96KM6 892 aaPredicted RBP11.6□□□□□ -0.55
UBE2D3-208ENST00000394803 ANGEL1Q9UNK9 670 aaKnown RBP11.6□□□□□ -0.55
UBE2D3-208ENST00000394803 CCDC9Q9Y3X0 531 aaKnown RBP11.6□□□□□ -0.55
UBE2D3-208ENST00000394803 C4AP0C0L4 1744 aa11.6□□□□□ -0.55
UBE2D3-208ENST00000394803 C4BP0C0L5 1744 aa11.6□□□□□ -0.55
UBE2D3-208ENST00000394803 PAPPAQ13219 1627 aa11.6□□□□□ -0.55
UBE2D3-208ENST00000394803 CUTAO60888 179 aa11.59□□□□□ -0.55
UBE2D3-208ENST00000394803 ATRNO75882 1429 aa11.59□□□□□ -0.55
UBE2D3-208ENST00000394803 FGAP02671 866 aa11.59□□□□□ -0.55
UBE2D3-208ENST00000394803 POLR3DP05423 398 aaPredicted RBP11.59□□□□□ -0.55
UBE2D3-208ENST00000394803 ATF3P18847 181 aa11.59□□□□□ -0.55
UBE2D3-208ENST00000394803 TNS3Q68CZ2 1445 aa11.59□□□□□ -0.55
UBE2D3-208ENST00000394803 HOMER1Q86YM7 354 aa11.59□□□□□ -0.55
UBE2D3-208ENST00000394803 PLA2G12BQ9BX93 195 aa11.59□□□□□ -0.55
UBE2D3-208ENST00000394803 ZHX1Q9UKY1 873 aaPredicted RBP11.59□□□□□ -0.55
UBE2D3-208ENST00000394803 NWD2Q9ULI1 1742 aa11.59□□□□□ -0.55
UBE2D3-208ENST00000394803 SERPINC1P01008 464 aa11.59□□□□□ -0.55
UBE2D3-208ENST00000394803 METAP2P50579 478 aaKnown RBP eCLIP11.59□□□□□ -0.55
UBE2D3-208ENST00000394803 TRIM28Q13263 835 aaKnown RBP11.59□□□□□ -0.55
UBE2D3-208ENST00000394803 E4F1Q66K89 784 aaPredicted RBP11.59□□□□□ -0.55
UBE2D3-208ENST00000394803 XAGE2Q96GT9 111 aa11.59□□□□□ -0.55
UBE2D3-208ENST00000394803 TEX13AQ9BXU3 409 aaPredicted RBP11.59□□□□□ -0.55
UBE2D3-208ENST00000394803 ATP8B1O43520 1251 aa11.58□□□□□ -0.56
UBE2D3-208ENST00000394803 CHGBP05060 677 aa11.58□□□□□ -0.56
UBE2D3-208ENST00000394803 UBASH3AP57075 661 aa11.58□□□□□ -0.56
UBE2D3-208ENST00000394803 ETF1P62495 437 aaKnown RBP11.58□□□□□ -0.56
UBE2D3-208ENST00000394803 KMT5BQ4FZB7 885 aa11.58□□□□□ -0.56
UBE2D3-208ENST00000394803 LRRC24Q50LG9 513 aa11.58□□□□□ -0.56
UBE2D3-208ENST00000394803 AXDND1Q5T1B0 1012 aaPredicted RBP11.58□□□□□ -0.56
UBE2D3-208ENST00000394803 CHST3Q7LGC8 479 aa11.58□□□□□ -0.56
UBE2D3-208ENST00000394803 ALG1Q9BT22 464 aa11.58□□□□□ -0.56
UBE2D3-208ENST00000394803 BCL11BQ9C0K0 894 aaPredicted RBP11.58□□□□□ -0.56
UBE2D3-208ENST00000394803 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.58□□□□□ -0.56
UBE2D3-208ENST00000394803 FAM53CQ9NYF3 392 aa11.58□□□□□ -0.56
UBE2D3-208ENST00000394803 HPS5Q9UPZ3 1129 aa11.58□□□□□ -0.56
UBE2D3-208ENST00000394803 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.58□□□□□ -0.56
UBE2D3-208ENST00000394803 STK36Q9NRP7 1315 aa11.58□□□□□ -0.56
UBE2D3-208ENST00000394803 NBPF26B4DH59 902 aa11.58□□□□□ -0.56
UBE2D3-208ENST00000394803 PIP4K2AP48426 406 aaPredicted RBP11.58□□□□□ -0.56
UBE2D3-208ENST00000394803 IFIT5Q13325 482 aaKnown RBP11.58□□□□□ -0.56
UBE2D3-208ENST00000394803 ELF2Q15723 593 aa11.58□□□□□ -0.56
UBE2D3-208ENST00000394803 NBPF14Q5TI25 921 aa11.58□□□□□ -0.56
UBE2D3-208ENST00000394803 CCDC102BQ68D86 513 aa11.58□□□□□ -0.56
UBE2D3-208ENST00000394803 ARMCX5Q6P1M9 558 aa11.58□□□□□ -0.56
UBE2D3-208ENST00000394803 NBPF10Q6P3W6 841 aaKnown RBP11.58□□□□□ -0.56
UBE2D3-208ENST00000394803 NBPF15Q8N660 670 aa11.58□□□□□ -0.56
UBE2D3-208ENST00000394803 MNS1Q8NEH6 495 aa11.58□□□□□ -0.56
UBE2D3-208ENST00000394803 ISCA1Q9BUE6 129 aa11.58□□□□□ -0.56
UBE2D3-208ENST00000394803 HPSEQ9Y251 543 aa11.58□□□□□ -0.56
UBE2D3-208ENST00000394803 ARHGAP6O43182 974 aa11.57□□□□□ -0.56
UBE2D3-208ENST00000394803 GPAA1O43292 621 aa11.57□□□□□ -0.56
UBE2D3-208ENST00000394803 PCCAP05165 728 aaPredicted RBP11.57□□□□□ -0.56
UBE2D3-208ENST00000394803 TOP1P11387 765 aaKnown RBP11.57□□□□□ -0.56
UBE2D3-208ENST00000394803 NCAPHQ15003 741 aa11.57□□□□□ -0.56
UBE2D3-208ENST00000394803 SAFBQ15424 915 aaKnown RBP eCLIP11.57□□□□□ -0.56
UBE2D3-208ENST00000394803 CCDC93Q567U6 631 aa11.57□□□□□ -0.56
UBE2D3-208ENST00000394803 TTLL5Q6EMB2 1281 aa11.57□□□□□ -0.56
UBE2D3-208ENST00000394803 KANK3Q6NY19 840 aa11.57□□□□□ -0.56
UBE2D3-208ENST00000394803 FBXO38Q6PIJ6 1188 aa11.57□□□□□ -0.56
UBE2D3-208ENST00000394803 SYT10Q6XYQ8 523 aa11.57□□□□□ -0.56
UBE2D3-208ENST00000394803 KIF6Q6ZMV9 814 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms