RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 SH2B1Q9NRF2 756 aaPredicted RBP24.07■■□□□ 1.44
PRKCD-202ENST00000394729 COL23A1Q86Y22 540 aaPredicted RBP24.07■■□□□ 1.44
PRKCD-202ENST00000394729 ZSCAN31Q96LW9 406 aaPredicted RBP24.07■■□□□ 1.44
PRKCD-202ENST00000394729 NBPF3Q9H094 633 aa24.07■■□□□ 1.44
PRKCD-202ENST00000394729 GNL3LQ9NVN8 582 aaKnown RBP24.07■■□□□ 1.44
PRKCD-202ENST00000394729 BCORQ6W2J9 1755 aa24.07■■□□□ 1.44
PRKCD-202ENST00000394729 PRC1O43663 620 aa24.06■■□□□ 1.44
PRKCD-202ENST00000394729 MYL10Q9BUA6 226 aa24.06■■□□□ 1.44
PRKCD-202ENST00000394729 SENP2Q9HC62 589 aa24.06■■□□□ 1.44
PRKCD-202ENST00000394729 LMBRD1Q9NUN5 540 aa24.06■■□□□ 1.44
PRKCD-202ENST00000394729 HIBADHP31937 336 aaKnown RBP24.06■■□□□ 1.44
PRKCD-202ENST00000394729 UBE4AQ14139 1066 aa24.06■■□□□ 1.44
PRKCD-202ENST00000394729 ANKRD1Q15327 319 aa24.06■■□□□ 1.44
PRKCD-202ENST00000394729 UBE3CQ15386 1083 aa24.06■■□□□ 1.44
PRKCD-202ENST00000394729 TSGA10IPQ3SY00 556 aa24.06■■□□□ 1.44
PRKCD-202ENST00000394729 COL1A1P02452 1464 aaPredicted RBP24.06■■□□□ 1.44
PRKCD-202ENST00000394729 GADD45BO75293 160 aaPredicted RBP24.06■■□□□ 1.44
PRKCD-202ENST00000394729 CTNNA3Q9UI47 895 aa24.06■■□□□ 1.44
PRKCD-202ENST00000394729 TAF1LQ8IZX4 1826 aa24.06■■□□□ 1.44
PRKCD-202ENST00000394729 WDR33Q9C0J8 1336 aaKnown RBP24.05■■□□□ 1.44
PRKCD-202ENST00000394729 ZNF512BQ96KM6 892 aaPredicted RBP24.05■■□□□ 1.44
PRKCD-202ENST00000394729 ST5P78524 1137 aa24.05■■□□□ 1.44
PRKCD-202ENST00000394729 POTEAQ6S8J7 498 aa24.05■■□□□ 1.44
PRKCD-202ENST00000394729 RTL9Q8NET4 1388 aa24.04■■□□□ 1.44
PRKCD-202ENST00000394729 ZSCAN22P10073 491 aaPredicted RBP24.04■■□□□ 1.44
PRKCD-202ENST00000394729 DNM1Q05193 864 aaKnown RBP24.04■■□□□ 1.44
PRKCD-202ENST00000394729 SLC27A3Q5K4L6 730 aa24.04■■□□□ 1.44
PRKCD-202ENST00000394729 IFNL3Q8IZI9 196 aa24.04■■□□□ 1.44
PRKCD-202ENST00000394729 FBXW7Q969H0 707 aa24.04■■□□□ 1.44
PRKCD-202ENST00000394729 AATFQ9NY61 560 aaKnown RBP eCLIP24.04■■□□□ 1.44
PRKCD-202ENST00000394729 PRDM1O75626 825 aa24.04■■□□□ 1.44
PRKCD-202ENST00000394729 RIMBP2O15034 1052 aa24.03■■□□□ 1.44
PRKCD-202ENST00000394729 EN1Q05925 392 aaPredicted RBP24.03■■□□□ 1.44
PRKCD-202ENST00000394729 TRDNQ13061 729 aa24.03■■□□□ 1.44
PRKCD-202ENST00000394729 GPT2Q8TD30 523 aa24.03■■□□□ 1.44
PRKCD-202ENST00000394729 NEDD4P46934 1319 aa24.03■■□□□ 1.44
PRKCD-202ENST00000394729 CEBPZQ03701 1054 aaKnown RBP24.03■■□□□ 1.44
PRKCD-202ENST00000394729 ZNF384Q8TF68 577 aa24.03■■□□□ 1.44
PRKCD-202ENST00000394729 GRAPQ13588 217 aa24.02■■□□□ 1.44
PRKCD-202ENST00000394729 GRAPLQ8TC17 118 aaPredicted RBP24.02■■□□□ 1.44
PRKCD-202ENST00000394729 GTF3C6Q969F1 213 aa24.02■■□□□ 1.44
PRKCD-202ENST00000394729 GJB4Q9NTQ9 266 aa24.02■■□□□ 1.44
PRKCD-202ENST00000394729 TCHHQ07283 1943 aa24.02■■□□□ 1.44
PRKCD-202ENST00000394729 KLF18A0A0U1RQI7 1052 aa24.02■■□□□ 1.44
PRKCD-202ENST00000394729 UFL1O94874 794 aa24.02■■□□□ 1.44
PRKCD-202ENST00000394729 CYB5R4Q7L1T6 521 aa24.02■■□□□ 1.44
PRKCD-202ENST00000394729 TFIP11Q9UBB9 837 aaKnown RBP24.02■■□□□ 1.44
PRKCD-202ENST00000394729 BRPF3Q9ULD4 1205 aa24.02■■□□□ 1.44
PRKCD-202ENST00000394729 MTMR6Q9Y217 621 aa24.02■■□□□ 1.44
PRKCD-202ENST00000394729 SCN7AQ01118 1682 aa24.02■■□□□ 1.44
PRKCD-202ENST00000394729 GSG1L2A8MUP6 293 aa24.02■■□□□ 1.43
PRKCD-202ENST00000394729 C6orf229H3BNL8 230 aa24.02■■□□□ 1.43
PRKCD-202ENST00000394729 ANTXR2P58335 489 aa24.02■■□□□ 1.43
PRKCD-202ENST00000394729 GPSM2P81274 684 aa24.02■■□□□ 1.43
PRKCD-202ENST00000394729 OTUD7BQ6GQQ9 843 aa24.02■■□□□ 1.43
PRKCD-202ENST00000394729 NAA16Q6N069 864 aaPredicted RBP24.02■■□□□ 1.43
PRKCD-202ENST00000394729 CCDC82Q8N4S0 544 aa24.02■■□□□ 1.43
PRKCD-202ENST00000394729 NCOA7Q8NI08 942 aa24.02■■□□□ 1.43
PRKCD-202ENST00000394729 C4AP0C0L4 1744 aa24.01■■□□□ 1.43
PRKCD-202ENST00000394729 EXOSC10Q01780 885 aaKnown RBP24.01■■□□□ 1.43
PRKCD-202ENST00000394729 GRIK5Q16478 980 aa24.01■■□□□ 1.43
PRKCD-202ENST00000394729 FAM184AQ8NB25 1140 aa24.01■■□□□ 1.43
PRKCD-202ENST00000394729 PDGFDQ9GZP0 370 aaPredicted RBP24.01■■□□□ 1.43
PRKCD-202ENST00000394729 TACC3Q9Y6A5 838 aa24.01■■□□□ 1.43
PRKCD-202ENST00000394729 TNRC6CQ9HCJ0 1690 aaKnown RBP24.01■■□□□ 1.43
PRKCD-202ENST00000394729 F13A1P00488 732 aa24.01■■□□□ 1.43
PRKCD-202ENST00000394729 MMP10P09238 476 aa24.01■■□□□ 1.43
PRKCD-202ENST00000394729 USP48Q86UV5 1035 aa24.01■■□□□ 1.43
PRKCD-202ENST00000394729 LRP5O75197 1615 aa24.01■■□□□ 1.43
PRKCD-202ENST00000394729 LY75O60449 1722 aa24.01■■□□□ 1.43
PRKCD-202ENST00000394729 POLRMTO00411 1230 aaKnown RBP24■■□□□ 1.43
PRKCD-202ENST00000394729 DIXDC1Q155Q3 683 aa24■■□□□ 1.43
PRKCD-202ENST00000394729 GOLGA8BA8MQT2 603 aa24■■□□□ 1.43
PRKCD-202ENST00000394729 MICU3Q86XE3 530 aa24■■□□□ 1.43
PRKCD-202ENST00000394729 RGS17Q9UGC6 210 aaPredicted RBP24■■□□□ 1.43
PRKCD-202ENST00000394729 MAGEB6P1A0A0J9YX57 407 aa23.99■■□□□ 1.43
PRKCD-202ENST00000394729 MCM5P33992 734 aa23.99■■□□□ 1.43
PRKCD-202ENST00000394729 MECOMQ03112 1051 aa23.99■■□□□ 1.43
PRKCD-202ENST00000394729 GAS2L3Q86XJ1 694 aa23.99■■□□□ 1.43
PRKCD-202ENST00000394729 HMGB1P09429 215 aaKnown RBP23.99■■□□□ 1.43
PRKCD-202ENST00000394729 ADRA2BP18089 450 aa23.99■■□□□ 1.43
PRKCD-202ENST00000394729 PDIA3P30101 505 aaKnown RBP23.99■■□□□ 1.43
PRKCD-202ENST00000394729 PANK2Q9BZ23 570 aa23.99■■□□□ 1.43
PRKCD-202ENST00000394729 PATL2C9JE40 543 aaKnown RBP23.98■■□□□ 1.43
PRKCD-202ENST00000394729 H3BQV1 296 aa23.98■■□□□ 1.43
PRKCD-202ENST00000394729 EZH2Q15910 746 aaKnown RBP23.98■■□□□ 1.43
PRKCD-202ENST00000394729 IFFO2Q5TF58 517 aa23.98■■□□□ 1.43
PRKCD-202ENST00000394729 NFXL1Q6ZNB6 911 aa23.98■■□□□ 1.43
PRKCD-202ENST00000394729 ANKRD2Q9GZV1 360 aa23.98■■□□□ 1.43
PRKCD-202ENST00000394729 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.97■■□□□ 1.43
PRKCD-202ENST00000394729 PTPDC1A2A3K4 754 aa23.97■■□□□ 1.43
PRKCD-202ENST00000394729 CTDNEP1O95476 244 aa23.97■■□□□ 1.43
PRKCD-202ENST00000394729 FBXO33Q7Z6M2 555 aa23.97■■□□□ 1.43
PRKCD-202ENST00000394729 MB21D2Q8IYB1 491 aaPredicted RBP23.97■■□□□ 1.43
PRKCD-202ENST00000394729 LAMB2P55268 1798 aa23.97■■□□□ 1.43
PRKCD-202ENST00000394729 F8W031 263 aaPredicted RBP23.97■■□□□ 1.43
PRKCD-202ENST00000394729 CMTR1Q8N1G2 835 aaKnown RBP23.97■■□□□ 1.43
PRKCD-202ENST00000394729 ZNF622Q969S3 477 aaKnown RBP eCLIP23.97■■□□□ 1.43
PRKCD-202ENST00000394729 MYH7P12883 1935 aa23.96■■□□□ 1.43
PRKCD-202ENST00000394729 DZIP1Q86YF9 867 aaKnown RBP23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms