RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 CYP46A1Q9Y6A2 500 aa14.28□□□□□ -0.12
SLC28A1-203ENST00000394573 ATP2C2O75185 946 aa14.27□□□□□ -0.12
SLC28A1-203ENST00000394573 HMOX1P09601 288 aa14.27□□□□□ -0.12
SLC28A1-203ENST00000394573 PRKAR2BP31323 418 aa14.27□□□□□ -0.12
SLC28A1-203ENST00000394573 CDC23Q9UJX2 597 aa14.27□□□□□ -0.12
SLC28A1-203ENST00000394573 SSH2Q76I76 1423 aa14.27□□□□□ -0.13
SLC28A1-203ENST00000394573 POTEB2H3BUK9 544 aa14.27□□□□□ -0.13
SLC28A1-203ENST00000394573 ARHGAP6O43182 974 aa14.27□□□□□ -0.13
SLC28A1-203ENST00000394573 RASSF9O75901 435 aa14.27□□□□□ -0.13
SLC28A1-203ENST00000394573 PYGBP11216 843 aa14.27□□□□□ -0.13
SLC28A1-203ENST00000394573 PTH1RQ03431 593 aa14.27□□□□□ -0.13
SLC28A1-203ENST00000394573 ICA1Q05084 483 aa14.27□□□□□ -0.13
SLC28A1-203ENST00000394573 ZNF569Q5MCW4 686 aa14.27□□□□□ -0.13
SLC28A1-203ENST00000394573 NCAPH2Q6IBW4 605 aa14.27□□□□□ -0.13
SLC28A1-203ENST00000394573 PARP9Q8IXQ6 854 aa14.27□□□□□ -0.13
SLC28A1-203ENST00000394573 TPX2Q9ULW0 747 aaKnown RBP14.27□□□□□ -0.13
SLC28A1-203ENST00000394573 ZNF232Q9UNY5 417 aa14.27□□□□□ -0.13
SLC28A1-203ENST00000394573 A0A1B0GVL5 298 aa14.26□□□□□ -0.13
SLC28A1-203ENST00000394573 ATP1A2P50993 1020 aa14.26□□□□□ -0.13
SLC28A1-203ENST00000394573 IFT88Q13099 833 aa14.26□□□□□ -0.13
SLC28A1-203ENST00000394573 PHACTR3Q96KR7 559 aa14.26□□□□□ -0.13
SLC28A1-203ENST00000394573 TEX13AQ9BXU3 409 aaPredicted RBP14.26□□□□□ -0.13
SLC28A1-203ENST00000394573 SH2B1Q9NRF2 756 aaPredicted RBP14.26□□□□□ -0.13
SLC28A1-203ENST00000394573 ME1P48163 572 aa14.26□□□□□ -0.13
SLC28A1-203ENST00000394573 SMTNP53814 917 aa14.26□□□□□ -0.13
SLC28A1-203ENST00000394573 CRACR2AQ9BSW2 395 aa14.26□□□□□ -0.13
SLC28A1-203ENST00000394573 GBP3Q9H0R5 595 aa14.26□□□□□ -0.13
SLC28A1-203ENST00000394573 SLC39A2Q9NP94 309 aa14.26□□□□□ -0.13
SLC28A1-203ENST00000394573 HAUS2Q9NVX0 235 aa14.26□□□□□ -0.13
SLC28A1-203ENST00000394573 ARHGEF5Q12774 1597 aa14.26□□□□□ -0.13
SLC28A1-203ENST00000394573 H3BQV1 296 aa14.25□□□□□ -0.13
SLC28A1-203ENST00000394573 AGPSO00116 658 aa14.25□□□□□ -0.13
SLC28A1-203ENST00000394573 PDCP20941 246 aa14.25□□□□□ -0.13
SLC28A1-203ENST00000394573 PPFIA1Q13136 1202 aa14.25□□□□□ -0.13
SLC28A1-203ENST00000394573 DCTN1Q14203 1278 aa14.25□□□□□ -0.13
SLC28A1-203ENST00000394573 SLC5A9Q2M3M2 681 aa14.25□□□□□ -0.13
SLC28A1-203ENST00000394573 FKBP15Q5T1M5 1219 aa14.25□□□□□ -0.13
SLC28A1-203ENST00000394573 IFFO2Q5TF58 517 aa14.25□□□□□ -0.13
SLC28A1-203ENST00000394573 NUP133Q8WUM0 1156 aa14.25□□□□□ -0.13
SLC28A1-203ENST00000394573 IL17RAQ96F46 866 aa14.25□□□□□ -0.13
SLC28A1-203ENST00000394573 CCDC114Q96M63 670 aa14.25□□□□□ -0.13
SLC28A1-203ENST00000394573 PSMD1Q99460 953 aa14.25□□□□□ -0.13
SLC28A1-203ENST00000394573 SALL3Q9BXA9 1300 aa14.25□□□□□ -0.13
SLC28A1-203ENST00000394573 PTPRTO14522 1441 aa14.25□□□□□ -0.13
SLC28A1-203ENST00000394573 CTAGE15A4D2H0 777 aa14.25□□□□□ -0.13
SLC28A1-203ENST00000394573 F6X3S4 739 aa14.25□□□□□ -0.13
SLC28A1-203ENST00000394573 CTAGE8P0CG41 777 aa14.25□□□□□ -0.13
SLC28A1-203ENST00000394573 FBLN1P23142 703 aa14.25□□□□□ -0.13
SLC28A1-203ENST00000394573 AARSP49588 968 aaKnown RBP eCLIP14.25□□□□□ -0.13
SLC28A1-203ENST00000394573 MTA1Q13330 715 aa14.25□□□□□ -0.13
SLC28A1-203ENST00000394573 NCAPHQ15003 741 aa14.25□□□□□ -0.13
SLC28A1-203ENST00000394573 CAPRIN2Q6IMN6 1127 aaKnown RBP14.25□□□□□ -0.13
SLC28A1-203ENST00000394573 CYB5D1Q6P9G0 228 aa14.25□□□□□ -0.13
SLC28A1-203ENST00000394573 CTAGE6Q86UF2 777 aa14.25□□□□□ -0.13
SLC28A1-203ENST00000394573 CTAGE4Q8IX94 777 aa14.25□□□□□ -0.13
SLC28A1-203ENST00000394573 MSL3Q8N5Y2 521 aaKnown RBP14.25□□□□□ -0.13
SLC28A1-203ENST00000394573 DRAXINQ8NBI3 349 aaPredicted RBP14.25□□□□□ -0.13
SLC28A1-203ENST00000394573 BRF1Q92994 677 aa14.25□□□□□ -0.13
SLC28A1-203ENST00000394573 ZSCAN31Q96LW9 406 aaPredicted RBP14.25□□□□□ -0.13
SLC28A1-203ENST00000394573 VCPKMTQ9H867 229 aa14.25□□□□□ -0.13
SLC28A1-203ENST00000394573 ADGRL1O94910 1474 aa14.25□□□□□ -0.13
SLC28A1-203ENST00000394573 ZC3H4Q9UPT8 1303 aaKnown RBP14.25□□□□□ -0.13
SLC28A1-203ENST00000394573 TRAPPC8Q9Y2L5 1435 aa14.24□□□□□ -0.13
SLC28A1-203ENST00000394573 FAM83GA6ND36 823 aa14.24□□□□□ -0.13
SLC28A1-203ENST00000394573 SYNJ2O15056 1496 aa14.24□□□□□ -0.13
SLC28A1-203ENST00000394573 FANCAO15360 1455 aa14.24□□□□□ -0.13
SLC28A1-203ENST00000394573 NUP153P49790 1475 aaKnown RBP14.24□□□□□ -0.13
SLC28A1-203ENST00000394573 RAB11FIP3O75154 756 aa14.24□□□□□ -0.13
SLC28A1-203ENST00000394573 MYO1EQ12965 1108 aa14.24□□□□□ -0.13
SLC28A1-203ENST00000394573 GOPCQ9HD26 462 aa14.24□□□□□ -0.13
SLC28A1-203ENST00000394573 LGR5O75473 907 aa14.23□□□□□ -0.13
SLC28A1-203ENST00000394573 ABL1P00519 1130 aa14.23□□□□□ -0.13
SLC28A1-203ENST00000394573 SPRED3Q2MJR0 410 aa14.23□□□□□ -0.13
SLC28A1-203ENST00000394573 ARMCX6Q7L4S7 300 aa14.23□□□□□ -0.13
SLC28A1-203ENST00000394573 RSRC1Q96IZ7 334 aaKnown RBP14.23□□□□□ -0.13
SLC28A1-203ENST00000394573 CDC5LQ99459 802 aaKnown RBP14.23□□□□□ -0.13
SLC28A1-203ENST00000394573 ATP6V0A4Q9HBG4 840 aa14.23□□□□□ -0.13
SLC28A1-203ENST00000394573 RIPOR2Q9Y4F9 1068 aa14.23□□□□□ -0.13
SLC28A1-203ENST00000394573 A0A1B0GVG6 124 aa14.23□□□□□ -0.13
SLC28A1-203ENST00000394573 SOWAHDA6NJG2 315 aa14.23□□□□□ -0.13
SLC28A1-203ENST00000394573 LAMB3Q13751 1172 aa14.23□□□□□ -0.13
SLC28A1-203ENST00000394573 HHATQ5VTY9 493 aa14.23□□□□□ -0.13
SLC28A1-203ENST00000394573 B4GALNT4Q76KP1 1039 aa14.23□□□□□ -0.13
SLC28A1-203ENST00000394573 NSMCE1Q8WV22 266 aa14.23□□□□□ -0.13
SLC28A1-203ENST00000394573 PNMA6EA0A0J9YXQ4 647 aa14.22□□□□□ -0.13
SLC28A1-203ENST00000394573 ARHGAP25P42331 645 aa14.22□□□□□ -0.13
SLC28A1-203ENST00000394573 FAM160A1Q05DH4 1040 aa14.22□□□□□ -0.13
SLC28A1-203ENST00000394573 RESTQ13127 1097 aa14.22□□□□□ -0.13
SLC28A1-203ENST00000394573 STAMBPL1Q96FJ0 436 aa14.22□□□□□ -0.13
SLC28A1-203ENST00000394573 MYO6Q9UM54 1294 aa14.22□□□□□ -0.13
SLC28A1-203ENST00000394573 PDCD2Q16342 344 aaPredicted RBP14.22□□□□□ -0.13
SLC28A1-203ENST00000394573 GNPTABQ3T906 1256 aa14.22□□□□□ -0.13
SLC28A1-203ENST00000394573 KCTD16Q68DU8 428 aa14.22□□□□□ -0.13
SLC28A1-203ENST00000394573 TTLL7Q6ZT98 887 aa14.22□□□□□ -0.13
SLC28A1-203ENST00000394573 SH2D3CQ8N5H7 860 aa14.22□□□□□ -0.13
SLC28A1-203ENST00000394573 OR8K1Q8NGG5 319 aa14.22□□□□□ -0.13
SLC28A1-203ENST00000394573 B4GALNT2Q8NHY0 566 aa14.22□□□□□ -0.13
SLC28A1-203ENST00000394573 EZH1Q92800 747 aaPredicted RBP14.22□□□□□ -0.13
SLC28A1-203ENST00000394573 STK31Q9BXU1 1019 aa14.22□□□□□ -0.13
SLC28A1-203ENST00000394573 DIAPH1O60610 1272 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms