RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 RNF20Q5VTR2 975 aa13.29□□□□□ -0.28
PDCD4-202ENST00000393104 CHST3Q7LGC8 479 aa13.29□□□□□ -0.28
PDCD4-202ENST00000393104 SMARCE1Q969G3 411 aa13.29□□□□□ -0.28
PDCD4-202ENST00000393104 WDR24Q96S15 920 aa13.29□□□□□ -0.28
PDCD4-202ENST00000393104 SLC52A2Q9HAB3 445 aa13.29□□□□□ -0.28
PDCD4-202ENST00000393104 ANO10Q9NW15 660 aa13.29□□□□□ -0.28
PDCD4-202ENST00000393104 ETF1P62495 437 aaKnown RBP13.29□□□□□ -0.28
PDCD4-202ENST00000393104 FAM193AP78312 1265 aa13.29□□□□□ -0.28
PDCD4-202ENST00000393104 DHX32Q7L7V1 743 aaKnown RBP13.29□□□□□ -0.28
PDCD4-202ENST00000393104 FBXW7Q969H0 707 aa13.29□□□□□ -0.28
PDCD4-202ENST00000393104 PHLPP2Q6ZVD8 1323 aa13.29□□□□□ -0.28
PDCD4-202ENST00000393104 A0A0U1RQJ8 604 aa13.29□□□□□ -0.28
PDCD4-202ENST00000393104 GOLGA6L4A6NEF3 574 aa13.29□□□□□ -0.28
PDCD4-202ENST00000393104 ERVV-2B6SEH9 535 aa13.29□□□□□ -0.28
PDCD4-202ENST00000393104 IL2RBP14784 551 aa13.29□□□□□ -0.28
PDCD4-202ENST00000393104 ARHGAP29Q52LW3 1261 aa13.29□□□□□ -0.28
PDCD4-202ENST00000393104 ATG9AQ7Z3C6 839 aa13.29□□□□□ -0.28
PDCD4-202ENST00000393104 ATRIPQ8WXE1 791 aa13.29□□□□□ -0.28
PDCD4-202ENST00000393104 FEZ2Q9UHY8 353 aaPredicted RBP13.29□□□□□ -0.28
PDCD4-202ENST00000393104 TUBE1Q9UJT0 475 aa13.29□□□□□ -0.28
PDCD4-202ENST00000393104 HPSEQ9Y251 543 aa13.29□□□□□ -0.28
PDCD4-202ENST00000393104 E7EWF7 191 aa13.28□□□□□ -0.28
PDCD4-202ENST00000393104 SPEF2Q9C093 1822 aa13.28□□□□□ -0.28
PDCD4-202ENST00000393104 AKAP11Q9UKA4 1901 aa13.28□□□□□ -0.28
PDCD4-202ENST00000393104 TTLL5Q6EMB2 1281 aa13.28□□□□□ -0.28
PDCD4-202ENST00000393104 GPATCH3Q96I76 525 aa13.28□□□□□ -0.28
PDCD4-202ENST00000393104 NBPF3Q9H094 633 aa13.28□□□□□ -0.28
PDCD4-202ENST00000393104 SPATA31A6Q5VVP1 1343 aa13.28□□□□□ -0.28
PDCD4-202ENST00000393104 GOLGA6L19H0YKK7 550 aa13.28□□□□□ -0.28
PDCD4-202ENST00000393104 PDE4BQ07343 736 aa13.28□□□□□ -0.28
PDCD4-202ENST00000393104 MCMDC2Q4G0Z9 681 aa13.28□□□□□ -0.28
PDCD4-202ENST00000393104 DDX46Q7L014 1031 aaKnown RBP13.28□□□□□ -0.28
PDCD4-202ENST00000393104 TMC6Q7Z403 805 aa13.28□□□□□ -0.28
PDCD4-202ENST00000393104 DDX21Q9NR30 783 aaKnown RBP eCLIP13.28□□□□□ -0.28
PDCD4-202ENST00000393104 DENND2AQ9ULE3 1009 aa13.28□□□□□ -0.28
PDCD4-202ENST00000393104 CYP27B1O15528 508 aa13.27□□□□□ -0.28
PDCD4-202ENST00000393104 GSDMDP57764 484 aa13.27□□□□□ -0.28
PDCD4-202ENST00000393104 ANTXR2P58335 489 aa13.27□□□□□ -0.28
PDCD4-202ENST00000393104 RAD51AP2Q09MP3 1159 aa13.27□□□□□ -0.28
PDCD4-202ENST00000393104 FUT8Q9BYC5 575 aa13.27□□□□□ -0.28
PDCD4-202ENST00000393104 H3BQF6 201 aa13.27□□□□□ -0.29
PDCD4-202ENST00000393104 KRT32Q14532 448 aa13.27□□□□□ -0.29
PDCD4-202ENST00000393104 NEK11Q8NG66 645 aa13.27□□□□□ -0.29
PDCD4-202ENST00000393104 NOL10Q9BSC4 688 aaKnown RBP13.27□□□□□ -0.29
PDCD4-202ENST00000393104 MYH7P12883 1935 aa13.27□□□□□ -0.29
PDCD4-202ENST00000393104 FAM237AA0A1B0GTK4 181 aa13.27□□□□□ -0.29
PDCD4-202ENST00000393104 CSB-PGBD3P0DP91 1061 aa13.27□□□□□ -0.29
PDCD4-202ENST00000393104 HSPD1P10809 573 aaKnown RBP13.27□□□□□ -0.29
PDCD4-202ENST00000393104 MAP3K9P80192 1104 aa13.27□□□□□ -0.29
PDCD4-202ENST00000393104 MDM2Q00987 491 aaPredicted RBP13.27□□□□□ -0.29
PDCD4-202ENST00000393104 MRPS27Q92552 414 aaKnown RBP13.27□□□□□ -0.29
PDCD4-202ENST00000393104 TIGD1Q96MW7 591 aa13.27□□□□□ -0.29
PDCD4-202ENST00000393104 POLR3EQ9NVU0 708 aa13.27□□□□□ -0.29
PDCD4-202ENST00000393104 TEFQ10587 303 aa13.26□□□□□ -0.29
PDCD4-202ENST00000393104 ATL3Q6DD88 541 aa13.26□□□□□ -0.29
PDCD4-202ENST00000393104 U3KPZ7 1027 aaPredicted RBP13.26□□□□□ -0.29
PDCD4-202ENST00000393104 M0R2C6 588 aa13.26□□□□□ -0.29
PDCD4-202ENST00000393104 G3BP1Q13283 466 aaKnown RBP eCLIP13.26□□□□□ -0.295e-8■■■■■ 27.5
PDCD4-202ENST00000393104 BMS1Q14692 1282 aaKnown RBP13.26□□□□□ -0.29
PDCD4-202ENST00000393104 PTPAQ15257 358 aa13.26□□□□□ -0.29
PDCD4-202ENST00000393104 CC2D1AQ6P1N0 951 aaPredicted RBP13.26□□□□□ -0.29
PDCD4-202ENST00000393104 SHC4Q6S5L8 630 aa13.26□□□□□ -0.29
PDCD4-202ENST00000393104 ZCRB1Q8TBF4 217 aaKnown RBP13.26□□□□□ -0.29
PDCD4-202ENST00000393104 ZNF274Q96GC6 653 aaPredicted RBP13.26□□□□□ -0.29
PDCD4-202ENST00000393104 MAP3K14Q99558 947 aa13.26□□□□□ -0.29
PDCD4-202ENST00000393104 MAST3O60307 1309 aa13.26□□□□□ -0.29
PDCD4-202ENST00000393104 NLRP12P59046 1061 aa13.26□□□□□ -0.29
PDCD4-202ENST00000393104 ZMYM1Q5SVZ6 1142 aa13.26□□□□□ -0.29
PDCD4-202ENST00000393104 SEC31BQ9NQW1 1179 aa13.26□□□□□ -0.29
PDCD4-202ENST00000393104 BIN1O00499 593 aa13.25□□□□□ -0.29
PDCD4-202ENST00000393104 GYS2P54840 703 aa13.25□□□□□ -0.29
PDCD4-202ENST00000393104 FOXO4P98177 505 aa13.25□□□□□ -0.29
PDCD4-202ENST00000393104 FANCCQ00597 558 aa13.25□□□□□ -0.29
PDCD4-202ENST00000393104 CEP57L1Q8IYX8 460 aa13.25□□□□□ -0.29
PDCD4-202ENST00000393104 KBTBD3Q8NAB2 608 aa13.25□□□□□ -0.29
PDCD4-202ENST00000393104 BCL9O00512 1426 aa13.25□□□□□ -0.29
PDCD4-202ENST00000393104 H3BQV1 296 aa13.25□□□□□ -0.29
PDCD4-202ENST00000393104 ZNF202O95125 648 aa13.25□□□□□ -0.29
PDCD4-202ENST00000393104 IFFO2Q5TF58 517 aa13.25□□□□□ -0.29
PDCD4-202ENST00000393104 BARGINQ6ZT62 677 aa13.25□□□□□ -0.29
PDCD4-202ENST00000393104 TOM1L2Q6ZVM7 507 aa13.25□□□□□ -0.29
PDCD4-202ENST00000393104 APTXQ7Z2E3 356 aaKnown RBP13.25□□□□□ -0.29
PDCD4-202ENST00000393104 PFKFB1P16118 471 aa13.25□□□□□ -0.29
PDCD4-202ENST00000393104 ME1P48163 572 aa13.25□□□□□ -0.29
PDCD4-202ENST00000393104 MUM1L1Q5H9M0 696 aa13.25□□□□□ -0.29
PDCD4-202ENST00000393104 CERKQ8TCT0 537 aa13.25□□□□□ -0.29
PDCD4-202ENST00000393104 UBE2Q2LH0YL09 131 aa13.24□□□□□ -0.29
PDCD4-202ENST00000393104 IKBKBO14920 756 aa13.24□□□□□ -0.29
PDCD4-202ENST00000393104 METTL16Q86W50 562 aaKnown RBP13.24□□□□□ -0.29
PDCD4-202ENST00000393104 VSTM4Q8IW00 320 aa13.24□□□□□ -0.29
PDCD4-202ENST00000393104 DSCC1Q9BVC3 393 aa13.24□□□□□ -0.29
PDCD4-202ENST00000393104 DNAI1Q9UI46 699 aa13.24□□□□□ -0.29
PDCD4-202ENST00000393104 NHSQ6T4R5 1651 aa13.24□□□□□ -0.29
PDCD4-202ENST00000393104 MAP2K7O14733 419 aa13.24□□□□□ -0.29
PDCD4-202ENST00000393104 KINO60870 393 aaKnown RBP13.24□□□□□ -0.29
PDCD4-202ENST00000393104 TOGARAM2Q6ZUX3 1019 aa13.24□□□□□ -0.29
PDCD4-202ENST00000393104 CCDC150Q8NCX0 1101 aa13.24□□□□□ -0.29
PDCD4-202ENST00000393104 AIFM3Q96NN9 605 aa13.24□□□□□ -0.29
PDCD4-202ENST00000393104 CARD6Q9BX69 1037 aa13.24□□□□□ -0.29
PDCD4-202ENST00000393104 MRFAP1Q9Y605 127 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms