RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 PGBD1Q96JS3 809 aa30.04■■■□□ 2.4
SMARCD3-203ENST00000392811 CASZ1Q86V15 1759 aa30.04■■■□□ 2.4
SMARCD3-203ENST00000392811 PATL2C9JE40 543 aaKnown RBP30.03■■■□□ 2.4
SMARCD3-203ENST00000392811 CYB5R4Q7L1T6 521 aa30.03■■■□□ 2.4
SMARCD3-203ENST00000392811 ANKRD18AQ8IVF6 992 aa30.03■■■□□ 2.4
SMARCD3-203ENST00000392811 BCL2L12Q9HB09 334 aa30.03■■■□□ 2.4
SMARCD3-203ENST00000392811 EPB41L4AQ9HCS5 686 aaPredicted RBP30.03■■■□□ 2.4
SMARCD3-203ENST00000392811 UVSSAQ2YD98 709 aa30.03■■■□□ 2.4
SMARCD3-203ENST00000392811 TBC1D9BQ66K14 1250 aa30.03■■■□□ 2.4
SMARCD3-203ENST00000392811 ARMT1Q9H993 441 aa30.03■■■□□ 2.4
SMARCD3-203ENST00000392811 ZMYM6O95789 1325 aa30.03■■■□□ 2.4
SMARCD3-203ENST00000392811 DHX16O60231 1041 aaKnown RBP30.02■■■□□ 2.4
SMARCD3-203ENST00000392811 GUCY1B3Q02153 619 aa30.02■■■□□ 2.4
SMARCD3-203ENST00000392811 HS1BP3Q53T59 392 aa30.02■■■□□ 2.4
SMARCD3-203ENST00000392811 RAB11FIP4Q86YS3 637 aa30.02■■■□□ 2.4
SMARCD3-203ENST00000392811 A0A1B0GUL6 1792 aa30.02■■■□□ 2.4
SMARCD3-203ENST00000392811 RGL2O15211 777 aa30.01■■■□□ 2.4
SMARCD3-203ENST00000392811 IFNL3Q8IZI9 196 aa30.01■■■□□ 2.4
SMARCD3-203ENST00000392811 NUP62CLQ9H1M0 184 aa30.01■■■□□ 2.4
SMARCD3-203ENST00000392811 TAF1P21675 1872 aa30.01■■■□□ 2.4
SMARCD3-203ENST00000392811 BTAF1O14981 1849 aa30.01■■■□□ 2.4
SMARCD3-203ENST00000392811 DACT1Q9NYF0 836 aa30.01■■■□□ 2.39
SMARCD3-203ENST00000392811 ANGEL1Q9UNK9 670 aaKnown RBP30.01■■■□□ 2.39
SMARCD3-203ENST00000392811 RC3H1Q5TC82 1133 aaKnown RBP30■■■□□ 2.39
SMARCD3-203ENST00000392811 ZSCAN30Q86W11 494 aa30■■■□□ 2.39
SMARCD3-203ENST00000392811 NEDD4P46934 1319 aa30■■■□□ 2.39
SMARCD3-203ENST00000392811 B4E1Z4 1266 aa30■■■□□ 2.39
SMARCD3-203ENST00000392811 NAPBQ9H115 298 aa30■■■□□ 2.39
SMARCD3-203ENST00000392811 BSDC1Q9NW68 430 aaPredicted RBP30■■■□□ 2.39
SMARCD3-203ENST00000392811 SH2B2O14492 632 aaPredicted RBP29.99■■■□□ 2.39
SMARCD3-203ENST00000392811 CEBPZQ03701 1054 aaKnown RBP29.99■■■□□ 2.39
SMARCD3-203ENST00000392811 SLC10A5Q5PT55 438 aa29.99■■■□□ 2.39
SMARCD3-203ENST00000392811 NARFQ9UHQ1 456 aa29.99■■■□□ 2.39
SMARCD3-203ENST00000392811 USP21Q9UK80 565 aa29.99■■■□□ 2.39
SMARCD3-203ENST00000392811 ZNF804BA4D1E1 1349 aa29.98■■■□□ 2.39
SMARCD3-203ENST00000392811 GSG1L2A8MUP6 293 aa29.98■■■□□ 2.39
SMARCD3-203ENST00000392811 RPS6KA4O75676 772 aa29.98■■■□□ 2.39
SMARCD3-203ENST00000392811 GTF2E1P29083 439 aaPredicted RBP29.98■■■□□ 2.39
SMARCD3-203ENST00000392811 BICD2Q8TD16 824 aa29.98■■■□□ 2.39
SMARCD3-203ENST00000392811 LRP2BPQ9P2M1 347 aa29.98■■■□□ 2.39
SMARCD3-203ENST00000392811 SRP68Q9UHB9 627 aaKnown RBP29.98■■■□□ 2.39
SMARCD3-203ENST00000392811 IQSEC3Q9UPP2 1182 aaPredicted RBP29.98■■■□□ 2.39
SMARCD3-203ENST00000392811 C4AP0C0L4 1744 aa29.98■■■□□ 2.39
SMARCD3-203ENST00000392811 C4BP0C0L5 1744 aa29.98■■■□□ 2.39
SMARCD3-203ENST00000392811 WTIPA6NIX2 430 aaPredicted RBP29.98■■■□□ 2.39
SMARCD3-203ENST00000392811 CAMK4Q16566 473 aa29.98■■■□□ 2.39
SMARCD3-203ENST00000392811 MAP3K11Q16584 847 aa29.98■■■□□ 2.39
SMARCD3-203ENST00000392811 ILDR1Q86SU0 546 aaPredicted RBP29.98■■■□□ 2.39
SMARCD3-203ENST00000392811 LCORLQ8N3X6 602 aa29.98■■■□□ 2.39
SMARCD3-203ENST00000392811 FTOQ9C0B1 505 aaKnown RBP eCLIP29.98■■■□□ 2.39
SMARCD3-203ENST00000392811 DDX19AQ9NUU7 478 aaKnown RBP29.98■■■□□ 2.39
SMARCD3-203ENST00000392811 THSD7AQ9UPZ6 1657 aa29.97■■■□□ 2.39
SMARCD3-203ENST00000392811 CPLX1O14810 134 aa29.97■■■□□ 2.39
SMARCD3-203ENST00000392811 GYG1P46976 350 aa29.97■■■□□ 2.39
SMARCD3-203ENST00000392811 INCENPQ9NQS7 918 aa29.97■■■□□ 2.39
SMARCD3-203ENST00000392811 ORC3Q9UBD5 711 aaPredicted RBP29.97■■■□□ 2.39
SMARCD3-203ENST00000392811 RCOR1Q9UKL0 485 aa29.97■■■□□ 2.39
SMARCD3-203ENST00000392811 NHSQ6T4R5 1651 aa29.97■■■□□ 2.39
SMARCD3-203ENST00000392811 PNPLA7Q6ZV29 1317 aa29.97■■■□□ 2.39
SMARCD3-203ENST00000392811 PRKAB2O43741 272 aa29.96■■■□□ 2.39
SMARCD3-203ENST00000392811 UBE4AQ14139 1066 aa29.96■■■□□ 2.39
SMARCD3-203ENST00000392811 CCDC192P0DO97 292 aa29.96■■■□□ 2.39
SMARCD3-203ENST00000392811 CTDSPL2Q05D32 466 aa29.96■■■□□ 2.39
SMARCD3-203ENST00000392811 FAM182BQ5T319 152 aa29.96■■■□□ 2.39
SMARCD3-203ENST00000392811 ATL3Q6DD88 541 aa29.96■■■□□ 2.39
SMARCD3-203ENST00000392811 ZNF396Q96N95 335 aaPredicted RBP29.96■■■□□ 2.39
SMARCD3-203ENST00000392811 USP28Q96RU2 1077 aa29.96■■■□□ 2.39
SMARCD3-203ENST00000392811 MINPP1Q9UNW1 487 aa29.96■■■□□ 2.39
SMARCD3-203ENST00000392811 GNPATO15228 680 aa29.95■■■□□ 2.39
SMARCD3-203ENST00000392811 CELF1Q92879 486 aaKnown RBP29.95■■■□□ 2.39
SMARCD3-203ENST00000392811 C8orf76Q96K31 380 aa29.95■■■□□ 2.39
SMARCD3-203ENST00000392811 TMEM87BQ96K49 555 aa29.95■■■□□ 2.39
SMARCD3-203ENST00000392811 TNMDQ9H2S6 317 aa29.95■■■□□ 2.39
SMARCD3-203ENST00000392811 NR1I2O75469 434 aa29.95■■■□□ 2.38
SMARCD3-203ENST00000392811 GNAT2P19087 354 aa29.95■■■□□ 2.38
SMARCD3-203ENST00000392811 OTUD7BQ6GQQ9 843 aa29.95■■■□□ 2.38
SMARCD3-203ENST00000392811 CLSTN2Q9H4D0 955 aa29.95■■■□□ 2.38
SMARCD3-203ENST00000392811 SENP2Q9HC62 589 aa29.95■■■□□ 2.38
SMARCD3-203ENST00000392811 SLC4A4Q9Y6R1 1079 aa29.95■■■□□ 2.38
SMARCD3-203ENST00000392811 CHD4Q14839 1912 aa29.94■■■□□ 2.38
SMARCD3-203ENST00000392811 TIAM2Q8IVF5 1701 aa29.94■■■□□ 2.38
SMARCD3-203ENST00000392811 MIGA1Q8NAN2 632 aa29.94■■■□□ 2.38
SMARCD3-203ENST00000392811 IGDCC4Q8TDY8 1250 aa29.94■■■□□ 2.38
SMARCD3-203ENST00000392811 SETDB2Q96T68 719 aa29.94■■■□□ 2.38
SMARCD3-203ENST00000392811 NYXQ9GZU5 481 aa29.94■■■□□ 2.38
SMARCD3-203ENST00000392811 GNL3LQ9NVN8 582 aaKnown RBP29.94■■■□□ 2.38
SMARCD3-203ENST00000392811 TACC3Q9Y6A5 838 aa29.94■■■□□ 2.38
SMARCD3-203ENST00000392811 USP25Q9UHP3 1055 aa29.93■■■□□ 2.38
SMARCD3-203ENST00000392811 CCNL1Q9UK58 526 aaPredicted RBP29.93■■■□□ 2.38
SMARCD3-203ENST00000392811 COL1A1P02452 1464 aaPredicted RBP29.93■■■□□ 2.38
SMARCD3-203ENST00000392811 COL24A1Q17RW2 1714 aa29.93■■■□□ 2.38
SMARCD3-203ENST00000392811 APOA5Q6Q788 366 aa29.93■■■□□ 2.38
SMARCD3-203ENST00000392811 NACAP1Q9BZK3 213 aa29.93■■■□□ 2.38
SMARCD3-203ENST00000392811 ZPR1O75312 459 aa29.92■■■□□ 2.38
SMARCD3-203ENST00000392811 METAP2P50579 478 aaKnown RBP eCLIP29.92■■■□□ 2.38
SMARCD3-203ENST00000392811 FBXO18Q8NFZ0 1043 aa29.92■■■□□ 2.38
SMARCD3-203ENST00000392811 CYP7A1P22680 504 aa29.91■■■□□ 2.38
SMARCD3-203ENST00000392811 TDO2P48775 406 aa29.91■■■□□ 2.38
SMARCD3-203ENST00000392811 AKNAD1Q5T1N1 836 aa29.91■■■□□ 2.38
SMARCD3-203ENST00000392811 RBM43Q6ZSC3 357 aaKnown RBP29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms