RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 TRMT112Q9UI30 125 aaKnown RBP13.63□□□□□ -0.23
RAPGEF3-201ENST00000389212 CLIC4Q9Y696 253 aa13.63□□□□□ -0.23
RAPGEF3-201ENST00000389212 ABCC6O95255 1503 aa13.63□□□□□ -0.23
RAPGEF3-201ENST00000389212 ZNF75DP51815 510 aa13.62□□□□□ -0.23
RAPGEF3-201ENST00000389212 ARID5BQ14865 1188 aa13.62□□□□□ -0.23
RAPGEF3-201ENST00000389212 RALYLQ86SE5 291 aaKnown RBP13.62□□□□□ -0.23
RAPGEF3-201ENST00000389212 ZNF274Q96GC6 653 aaPredicted RBP13.62□□□□□ -0.23
RAPGEF3-201ENST00000389212 SENP2Q9HC62 589 aa13.62□□□□□ -0.23
RAPGEF3-201ENST00000389212 PIH1D3Q9NQM4 214 aaKnown RBP13.62□□□□□ -0.23
RAPGEF3-201ENST00000389212 ORC3Q9UBD5 711 aaPredicted RBP13.62□□□□□ -0.23
RAPGEF3-201ENST00000389212 IRS4O14654 1257 aaPredicted RBP13.62□□□□□ -0.23
RAPGEF3-201ENST00000389212 STARD3NLO95772 234 aa13.62□□□□□ -0.23
RAPGEF3-201ENST00000389212 PHKA1P46020 1223 aa13.62□□□□□ -0.23
RAPGEF3-201ENST00000389212 SNW1Q13573 536 aaKnown RBP13.62□□□□□ -0.23
RAPGEF3-201ENST00000389212 HPS5Q9UPZ3 1129 aa13.62□□□□□ -0.23
RAPGEF3-201ENST00000389212 RIPOR2Q9Y4F9 1068 aa13.62□□□□□ -0.23
RAPGEF3-201ENST00000389212 PARP4Q9UKK3 1724 aaKnown RBP13.62□□□□□ -0.23
RAPGEF3-201ENST00000389212 ZNF213O14771 459 aa13.61□□□□□ -0.23
RAPGEF3-201ENST00000389212 CPLX1O14810 134 aa13.61□□□□□ -0.23
RAPGEF3-201ENST00000389212 CCDC144BQ3MJ40 725 aa13.61□□□□□ -0.23
RAPGEF3-201ENST00000389212 GIGYF2Q6Y7W6 1299 aaKnown RBP13.61□□□□□ -0.23
RAPGEF3-201ENST00000389212 BANK1Q8NDB2 785 aa13.61□□□□□ -0.23
RAPGEF3-201ENST00000389212 C8orf76Q96K31 380 aa13.61□□□□□ -0.23
RAPGEF3-201ENST00000389212 CALCOCO1Q9P1Z2 691 aa13.61□□□□□ -0.23
RAPGEF3-201ENST00000389212 PCDHA7Q9UN72 937 aa13.61□□□□□ -0.23
RAPGEF3-201ENST00000389212 MAP3K15Q6ZN16 1313 aa13.61□□□□□ -0.23
RAPGEF3-201ENST00000389212 TNS2Q63HR2 1409 aa13.61□□□□□ -0.23
RAPGEF3-201ENST00000389212 UBR2Q8IWV8 1755 aa13.61□□□□□ -0.23
RAPGEF3-201ENST00000389212 GOLGA6L6A8MZA4 724 aa13.61□□□□□ -0.23
RAPGEF3-201ENST00000389212 KINO60870 393 aaKnown RBP13.61□□□□□ -0.23
RAPGEF3-201ENST00000389212 CSF1RP07333 972 aa13.61□□□□□ -0.23
RAPGEF3-201ENST00000389212 MB21D2Q8IYB1 491 aaPredicted RBP13.61□□□□□ -0.23
RAPGEF3-201ENST00000389212 MYL10Q9BUA6 226 aa13.61□□□□□ -0.23
RAPGEF3-201ENST00000389212 RSPH14Q9UHP6 348 aa13.61□□□□□ -0.23
RAPGEF3-201ENST00000389212 RIC1Q4ADV7 1423 aa13.61□□□□□ -0.23
RAPGEF3-201ENST00000389212 KIF28PB7ZC32 967 aa13.61□□□□□ -0.23
RAPGEF3-201ENST00000389212 TBC1D10CQ8IV04 446 aa13.61□□□□□ -0.23
RAPGEF3-201ENST00000389212 TDRD7Q8NHU6 1098 aaKnown RBP13.61□□□□□ -0.23
RAPGEF3-201ENST00000389212 ZNF396Q96N95 335 aaPredicted RBP13.61□□□□□ -0.23
RAPGEF3-201ENST00000389212 NBPF3Q9H094 633 aa13.61□□□□□ -0.23
RAPGEF3-201ENST00000389212 CTNNA3Q9UI47 895 aa13.61□□□□□ -0.23
RAPGEF3-201ENST00000389212 WWC3Q9ULE0 1092 aa13.61□□□□□ -0.23
RAPGEF3-201ENST00000389212 UBE2Q2LH0YL09 131 aa13.6□□□□□ -0.23
RAPGEF3-201ENST00000389212 SF3A1Q15459 793 aaKnown RBP13.6□□□□□ -0.23
RAPGEF3-201ENST00000389212 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.6□□□□□ -0.23
RAPGEF3-201ENST00000389212 SPTLC3Q9NUV7 552 aa13.6□□□□□ -0.23
RAPGEF3-201ENST00000389212 CLIP2Q9UDT6 1046 aa13.6□□□□□ -0.23
RAPGEF3-201ENST00000389212 ANKRD18BA2A2Z9 1011 aa13.6□□□□□ -0.23
RAPGEF3-201ENST00000389212 GOLGA6L19H0YKK7 550 aa13.6□□□□□ -0.23
RAPGEF3-201ENST00000389212 BIN1O00499 593 aa13.6□□□□□ -0.23
RAPGEF3-201ENST00000389212 CTSWP56202 376 aa13.6□□□□□ -0.23
RAPGEF3-201ENST00000389212 STK38Q15208 465 aa13.6□□□□□ -0.23
RAPGEF3-201ENST00000389212 ISM2Q6H9L7 571 aa13.6□□□□□ -0.23
RAPGEF3-201ENST00000389212 TMED8Q6PL24 325 aaPredicted RBP13.6□□□□□ -0.23
RAPGEF3-201ENST00000389212 NCOA7Q8NI08 942 aa13.6□□□□□ -0.23
RAPGEF3-201ENST00000389212 B4E1Z4 1266 aa13.59□□□□□ -0.23
RAPGEF3-201ENST00000389212 CYB5R4Q7L1T6 521 aa13.59□□□□□ -0.23
RAPGEF3-201ENST00000389212 PLA2G4DQ86XP0 818 aa13.59□□□□□ -0.23
RAPGEF3-201ENST00000389212 PHKBQ93100 1093 aa13.59□□□□□ -0.23
RAPGEF3-201ENST00000389212 C16orf45Q96MC5 204 aaPredicted RBP13.59□□□□□ -0.23
RAPGEF3-201ENST00000389212 TOGARAM1Q9Y4F4 1720 aa13.59□□□□□ -0.23
RAPGEF3-201ENST00000389212 NDUFA8P51970 172 aa13.59□□□□□ -0.23
RAPGEF3-201ENST00000389212 IQCB1Q15051 598 aa13.59□□□□□ -0.23
RAPGEF3-201ENST00000389212 MICU3Q86XE3 530 aa13.59□□□□□ -0.23
RAPGEF3-201ENST00000389212 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.59□□□□□ -0.23
RAPGEF3-201ENST00000389212 SDF4Q9BRK5 362 aa13.59□□□□□ -0.23
RAPGEF3-201ENST00000389212 NWD2Q9ULI1 1742 aa13.59□□□□□ -0.23
RAPGEF3-201ENST00000389212 ZNF532Q9HCE3 1301 aa13.59□□□□□ -0.23
RAPGEF3-201ENST00000389212 ZFYP08048 801 aaPredicted RBP13.59□□□□□ -0.23
RAPGEF3-201ENST00000389212 MARCKSP29966 332 aaPredicted RBP13.59□□□□□ -0.23
RAPGEF3-201ENST00000389212 ENGASEQ8NFI3 743 aa13.59□□□□□ -0.23
RAPGEF3-201ENST00000389212 CACTINQ8WUQ7 758 aaKnown RBP13.59□□□□□ -0.23
RAPGEF3-201ENST00000389212 XIRP1Q702N8 1843 aaKnown RBP13.59□□□□□ -0.23
RAPGEF3-201ENST00000389212 BECN2A8MW95 431 aa13.58□□□□□ -0.24
RAPGEF3-201ENST00000389212 FAM160A1Q05DH4 1040 aa13.58□□□□□ -0.24
RAPGEF3-201ENST00000389212 TRIM28Q13263 835 aaKnown RBP13.58□□□□□ -0.24
RAPGEF3-201ENST00000389212 CCDC102BQ68D86 513 aa13.58□□□□□ -0.24
RAPGEF3-201ENST00000389212 FILIP1Q7Z7B0 1213 aa13.58□□□□□ -0.24
RAPGEF3-201ENST00000389212 AOPEPQ8N6M6 819 aa13.58□□□□□ -0.24
RAPGEF3-201ENST00000389212 NPHP1O15259 732 aa13.58□□□□□ -0.24
RAPGEF3-201ENST00000389212 CYP19A1P11511 503 aaPredicted RBP13.58□□□□□ -0.24
RAPGEF3-201ENST00000389212 ADD2P35612 726 aa13.58□□□□□ -0.24
RAPGEF3-201ENST00000389212 LRRFIP1Q32MZ4 808 aaKnown RBP13.58□□□□□ -0.24
RAPGEF3-201ENST00000389212 ZSCAN25Q6NSZ9 544 aa13.58□□□□□ -0.24
RAPGEF3-201ENST00000389212 SHANK3Q9BYB0 1731 aa13.58□□□□□ -0.24
RAPGEF3-201ENST00000389212 UBN2Q6ZU65 1347 aa13.58□□□□□ -0.24
RAPGEF3-201ENST00000389212 STX1AQ16623 288 aa13.58□□□□□ -0.24
RAPGEF3-201ENST00000389212 CAPN2P17655 700 aa13.57□□□□□ -0.24
RAPGEF3-201ENST00000389212 GTF2F1P35269 517 aaKnown RBP eCLIP13.57□□□□□ -0.24
RAPGEF3-201ENST00000389212 DZIP3Q86Y13 1208 aaKnown RBP13.57□□□□□ -0.24
RAPGEF3-201ENST00000389212 MRPS27Q92552 414 aaKnown RBP13.57□□□□□ -0.24
RAPGEF3-201ENST00000389212 PRIMPOLQ96LW4 560 aa13.57□□□□□ -0.24
RAPGEF3-201ENST00000389212 PLA2G12BQ9BX93 195 aa13.57□□□□□ -0.24
RAPGEF3-201ENST00000389212 SEC31BQ9NQW1 1179 aa13.57□□□□□ -0.24
RAPGEF3-201ENST00000389212 TRDNQ13061 729 aa13.57□□□□□ -0.24
RAPGEF3-201ENST00000389212 LINC00301Q8NCQ3 95 aa13.57□□□□□ -0.24
RAPGEF3-201ENST00000389212 FBXO18Q8NFZ0 1043 aa13.57□□□□□ -0.24
RAPGEF3-201ENST00000389212 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.57□□□□□ -0.24
RAPGEF3-201ENST00000389212 IQSEC3Q9UPP2 1182 aaPredicted RBP13.57□□□□□ -0.24
RAPGEF3-201ENST00000389212 RIOK3O14730 519 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms