RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 FDPSP14324 419 aaKnown RBP17.22■□□□□ 0.35
CTNS-202ENST00000381870 AMPHP49418 695 aa17.22■□□□□ 0.35
CTNS-202ENST00000381870 PSEN1P49768 467 aa17.22■□□□□ 0.35
CTNS-202ENST00000381870 MMP14P50281 582 aa17.22■□□□□ 0.35
CTNS-202ENST00000381870 CNNM3Q8NE01 707 aa17.22■□□□□ 0.35
CTNS-202ENST00000381870 KCNG4Q8TDN1 519 aa17.22■□□□□ 0.35
CTNS-202ENST00000381870 CCDC102AQ96A19 550 aa17.22■□□□□ 0.35
CTNS-202ENST00000381870 DEF6Q9H4E7 631 aa17.22■□□□□ 0.35
CTNS-202ENST00000381870 MKRN1Q9UHC7 482 aaKnown RBP17.22■□□□□ 0.35
CTNS-202ENST00000381870 U3KPZ7 1027 aaPredicted RBP17.22■□□□□ 0.35
CTNS-202ENST00000381870 USP5P45974 858 aa17.22■□□□□ 0.35
CTNS-202ENST00000381870 MTF1Q14872 753 aa17.22■□□□□ 0.35
CTNS-202ENST00000381870 DHX32Q7L7V1 743 aaKnown RBP17.22■□□□□ 0.35
CTNS-202ENST00000381870 TC2NQ8N9U0 490 aa17.22■□□□□ 0.35
CTNS-202ENST00000381870 RAB21Q9UL25 225 aa17.22■□□□□ 0.35
CTNS-202ENST00000381870 MROH7-TTC4A0A0A0MT08 1334 aa17.22■□□□□ 0.35
CTNS-202ENST00000381870 FLT4P35916 1363 aa17.22■□□□□ 0.35
CTNS-202ENST00000381870 WDHD1O75717 1129 aaPredicted RBP17.21■□□□□ 0.35
CTNS-202ENST00000381870 TFRCP02786 760 aaKnown RBP17.21■□□□□ 0.35
CTNS-202ENST00000381870 TBX2Q13207 712 aaPredicted RBP17.21■□□□□ 0.35
CTNS-202ENST00000381870 CHST3Q7LGC8 479 aa17.21■□□□□ 0.35
CTNS-202ENST00000381870 KAZALD1Q96I82 304 aa17.21■□□□□ 0.35
CTNS-202ENST00000381870 SUCLG2Q96I99 432 aa17.21■□□□□ 0.35
CTNS-202ENST00000381870 MAP3K2Q9Y2U5 619 aa17.21■□□□□ 0.35
CTNS-202ENST00000381870 ZNF609O15014 1411 aa17.21■□□□□ 0.35
CTNS-202ENST00000381870 A0A0U1RQJ8 604 aa17.21■□□□□ 0.34
CTNS-202ENST00000381870 KCNQ3O43525 872 aa17.21■□□□□ 0.34
CTNS-202ENST00000381870 STX10O60499 249 aa17.21■□□□□ 0.34
CTNS-202ENST00000381870 ATRIPQ8WXE1 791 aa17.21■□□□□ 0.34
CTNS-202ENST00000381870 LZTFL1Q9NQ48 299 aa17.21■□□□□ 0.34
CTNS-202ENST00000381870 A0A0G2JLW4 131 aa17.2■□□□□ 0.34
CTNS-202ENST00000381870 RHOXF2BP0C7M4 288 aa17.2■□□□□ 0.34
CTNS-202ENST00000381870 EIF4A1P60842 406 aaKnown RBP17.2■□□□□ 0.34
CTNS-202ENST00000381870 TEFQ10587 303 aa17.2■□□□□ 0.34
CTNS-202ENST00000381870 PNOCQ13519 176 aa17.2■□□□□ 0.34
CTNS-202ENST00000381870 SKIDA1Q1XH10 827 aa17.2■□□□□ 0.34
CTNS-202ENST00000381870 AXDND1Q5T1B0 1012 aaPredicted RBP17.2■□□□□ 0.34
CTNS-202ENST00000381870 RHOXF2Q9BQY4 288 aa17.2■□□□□ 0.34
CTNS-202ENST00000381870 GJB4Q9NTQ9 266 aa17.2■□□□□ 0.34
CTNS-202ENST00000381870 BABAM1Q9NWV8 329 aa17.2■□□□□ 0.34
CTNS-202ENST00000381870 SBNO1A3KN83 1393 aa17.2■□□□□ 0.34
CTNS-202ENST00000381870 PDIA3P30101 505 aaKnown RBP17.2■□□□□ 0.34
CTNS-202ENST00000381870 CASP8Q14790 479 aa17.2■□□□□ 0.34
CTNS-202ENST00000381870 MSANTD4Q8NCY6 345 aa17.2■□□□□ 0.34
CTNS-202ENST00000381870 POLR3EQ9NVU0 708 aa17.2■□□□□ 0.34
CTNS-202ENST00000381870 TUBE1Q9UJT0 475 aa17.2■□□□□ 0.34
CTNS-202ENST00000381870 NALCNQ8IZF0 1738 aa17.19■□□□□ 0.34
CTNS-202ENST00000381870 FMN2Q9NZ56 1722 aa17.19■□□□□ 0.34
CTNS-202ENST00000381870 YEATS4O95619 227 aa17.19■□□□□ 0.34
CTNS-202ENST00000381870 MARCKSP29966 332 aaPredicted RBP17.19■□□□□ 0.34
CTNS-202ENST00000381870 VSNL1P62760 191 aa17.19■□□□□ 0.34
CTNS-202ENST00000381870 FAM204AQ9H8W3 233 aa17.19■□□□□ 0.34
CTNS-202ENST00000381870 ERLIN1O75477 346 aa17.19■□□□□ 0.34
CTNS-202ENST00000381870 USP6P35125 1406 aa17.18■□□□□ 0.34
CTNS-202ENST00000381870 PRR29P0C7W0 189 aa17.18■□□□□ 0.34
CTNS-202ENST00000381870 EXOSC10Q01780 885 aaKnown RBP17.18■□□□□ 0.34
CTNS-202ENST00000381870 HSP90B2PQ58FF3 399 aa17.18■□□□□ 0.34
CTNS-202ENST00000381870 FAM71BQ8TC56 605 aa17.18■□□□□ 0.34
CTNS-202ENST00000381870 LRRIQ3A6PVS8 624 aaPredicted RBP17.18■□□□□ 0.34
CTNS-202ENST00000381870 CMA1P23946 247 aa17.18■□□□□ 0.34
CTNS-202ENST00000381870 MYSM1Q5VVJ2 828 aa17.18■□□□□ 0.34
CTNS-202ENST00000381870 SUGP1Q8IWZ8 645 aaKnown RBP17.18■□□□□ 0.34
CTNS-202ENST00000381870 EFCAB13Q8IY85 973 aa17.18■□□□□ 0.34
CTNS-202ENST00000381870 MSL3Q8N5Y2 521 aaKnown RBP17.18■□□□□ 0.34
CTNS-202ENST00000381870 CDC23Q9UJX2 597 aa17.18■□□□□ 0.34
CTNS-202ENST00000381870 SOWAHDA6NJG2 315 aa17.17■□□□□ 0.34
CTNS-202ENST00000381870 CPP00450 1065 aa17.17■□□□□ 0.34
CTNS-202ENST00000381870 CDC27P30260 824 aa17.17■□□□□ 0.34
CTNS-202ENST00000381870 PDE4BQ07343 736 aa17.17■□□□□ 0.34
CTNS-202ENST00000381870 TNRQ92752 1358 aa17.17■□□□□ 0.34
CTNS-202ENST00000381870 KIF28PB7ZC32 967 aa17.16■□□□□ 0.34
CTNS-202ENST00000381870 PPFIA4O75335 1185 aa17.16■□□□□ 0.34
CTNS-202ENST00000381870 HMGB1P09429 215 aaKnown RBP17.16■□□□□ 0.34
CTNS-202ENST00000381870 SYKP43405 635 aa17.16■□□□□ 0.34
CTNS-202ENST00000381870 NCAPD2Q15021 1401 aa17.16■□□□□ 0.34
CTNS-202ENST00000381870 MCMDC2Q4G0Z9 681 aa17.16■□□□□ 0.34
CTNS-202ENST00000381870 MMS22LQ6ZRQ5 1243 aa17.16■□□□□ 0.34
CTNS-202ENST00000381870 TADA2BQ86TJ2 420 aa17.16■□□□□ 0.34
CTNS-202ENST00000381870 MICALL1Q8N3F8 863 aa17.16■□□□□ 0.34
CTNS-202ENST00000381870 CEP112Q8N8E3 955 aa17.16■□□□□ 0.34
CTNS-202ENST00000381870 HDAC5Q9UQL6 1122 aa17.16■□□□□ 0.34
CTNS-202ENST00000381870 A2ML1A8K2U0 1454 aa17.16■□□□□ 0.34
CTNS-202ENST00000381870 POTEB2H3BUK9 544 aa17.16■□□□□ 0.34
CTNS-202ENST00000381870 PROSER3Q2NL68 480 aa17.16■□□□□ 0.34
CTNS-202ENST00000381870 ANO1Q5XXA6 986 aa17.16■□□□□ 0.34
CTNS-202ENST00000381870 SPECC1LQ69YQ0 1117 aa17.16■□□□□ 0.34
CTNS-202ENST00000381870 MCTP2Q6DN12 878 aa17.16■□□□□ 0.34
CTNS-202ENST00000381870 C8orf76Q96K31 380 aa17.16■□□□□ 0.34
CTNS-202ENST00000381870 AGXT2Q9BYV1 514 aa17.16■□□□□ 0.34
CTNS-202ENST00000381870 GPHNQ9NQX3 736 aaPredicted RBP17.16■□□□□ 0.34
CTNS-202ENST00000381870 OLFM4Q6UX06 510 aa17.15■□□□□ 0.34
CTNS-202ENST00000381870 LTV1Q96GA3 475 aaPredicted RBP17.15■□□□□ 0.34
CTNS-202ENST00000381870 LAMA4Q16363 1823 aa17.15■□□□□ 0.34
CTNS-202ENST00000381870 CT47A1Q5JQC4 288 aaPredicted RBP17.15■□□□□ 0.34
CTNS-202ENST00000381870 SYNE3Q6ZMZ3 975 aa17.15■□□□□ 0.34
CTNS-202ENST00000381870 USHBP1Q8N6Y0 703 aa17.15■□□□□ 0.34
CTNS-202ENST00000381870 C19orf44Q9H6X5 657 aa17.15■□□□□ 0.34
CTNS-202ENST00000381870 LGR6Q9HBX8 967 aa17.15■□□□□ 0.34
CTNS-202ENST00000381870 DBNLQ9UJU6 430 aaKnown RBP17.15■□□□□ 0.34
CTNS-202ENST00000381870 CCDC175P0C221 793 aa17.14■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms