RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 PLVAPQ9BX97 442 aa15.87■□□□□ 0.13
SNPH-201ENST00000381867 RASAL2Q9UJF2 1139 aa15.87■□□□□ 0.13
SNPH-201ENST00000381867 TRAF1Q13077 416 aa15.87■□□□□ 0.13
SNPH-201ENST00000381867 OTUD6BQ8N6M0 293 aa15.87■□□□□ 0.13
SNPH-201ENST00000381867 EHMT1Q9H9B1 1298 aa15.87■□□□□ 0.13
SNPH-201ENST00000381867 CABP5Q9NP86 173 aa15.87■□□□□ 0.13
SNPH-201ENST00000381867 STK32BQ9NY57 414 aa15.87■□□□□ 0.13
SNPH-201ENST00000381867 DCTPP1Q9H773 170 aa15.87■□□□□ 0.13
SNPH-201ENST00000381867 LAMC1P11047 1609 aa15.87■□□□□ 0.13
SNPH-201ENST00000381867 CCDC129Q6ZRS4 1044 aa15.87■□□□□ 0.13
SNPH-201ENST00000381867 TUBBP07437 444 aa15.87■□□□□ 0.13
SNPH-201ENST00000381867 GNAT2P19087 354 aa15.86■□□□□ 0.13
SNPH-201ENST00000381867 DNM1Q05193 864 aaKnown RBP15.86■□□□□ 0.13
SNPH-201ENST00000381867 PLCG2P16885 1265 aa15.86■□□□□ 0.13
SNPH-201ENST00000381867 PTGS1P23219 599 aa15.86■□□□□ 0.13
SNPH-201ENST00000381867 KRT83P78385 493 aa15.86■□□□□ 0.13
SNPH-201ENST00000381867 PPP1R14CQ8TAE6 165 aa15.86■□□□□ 0.13
SNPH-201ENST00000381867 CCDC87Q9NVE4 849 aa15.86■□□□□ 0.13
SNPH-201ENST00000381867 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.86■□□□□ 0.13
SNPH-201ENST00000381867 CCDC97Q96F63 343 aaPredicted RBP15.86■□□□□ 0.13
SNPH-201ENST00000381867 HAND2P61296 217 aa15.86■□□□□ 0.13
SNPH-201ENST00000381867 TSPYL6Q8N831 410 aa15.86■□□□□ 0.13
SNPH-201ENST00000381867 RBM17Q96I25 401 aaKnown RBP15.86■□□□□ 0.13
SNPH-201ENST00000381867 CNNM2Q9H8M5 875 aa15.86■□□□□ 0.13
SNPH-201ENST00000381867 INO80Q9ULG1 1556 aaPredicted RBP15.85■□□□□ 0.13
SNPH-201ENST00000381867 KLF18A0A0U1RQI7 1052 aa15.85■□□□□ 0.13
SNPH-201ENST00000381867 PDE1AP54750 535 aa15.85■□□□□ 0.13
SNPH-201ENST00000381867 CEP85Q6P2H3 762 aa15.85■□□□□ 0.13
SNPH-201ENST00000381867 RAD50Q92878 1312 aa15.85■□□□□ 0.13
SNPH-201ENST00000381867 MFSD6Q6ZSS7 791 aa15.85■□□□□ 0.13
SNPH-201ENST00000381867 TTC14Q96N46 770 aa15.85■□□□□ 0.13
SNPH-201ENST00000381867 RASSF4Q9H2L5 321 aa15.85■□□□□ 0.13
SNPH-201ENST00000381867 PCDHB15Q9Y5E8 787 aa15.85■□□□□ 0.13
SNPH-201ENST00000381867 CEP57Q86XR8 500 aa15.85■□□□□ 0.13
SNPH-201ENST00000381867 DRC1Q96MC2 740 aa15.85■□□□□ 0.13
SNPH-201ENST00000381867 SPAG5Q96R06 1193 aa15.85■□□□□ 0.13
SNPH-201ENST00000381867 CARD10Q9BWT7 1032 aa15.85■□□□□ 0.13
SNPH-201ENST00000381867 KRT23Q9C075 422 aa15.85■□□□□ 0.13
SNPH-201ENST00000381867 TRIM35Q9UPQ4 493 aa15.85■□□□□ 0.13
SNPH-201ENST00000381867 KRT86O43790 486 aa15.85■□□□□ 0.13
SNPH-201ENST00000381867 RAB11FIP4Q86YS3 637 aa15.85■□□□□ 0.13
SNPH-201ENST00000381867 CCDC77Q9BR77 488 aa15.85■□□□□ 0.13
SNPH-201ENST00000381867 ZC3H13Q5T200 1668 aaKnown RBP15.85■□□□□ 0.13
SNPH-201ENST00000381867 TMTC2Q8N394 836 aa15.84■□□□□ 0.13
SNPH-201ENST00000381867 ZBTB40Q9NUA8 1239 aa15.84■□□□□ 0.13
SNPH-201ENST00000381867 SH3TC1Q8TE82 1336 aa15.84■□□□□ 0.13
SNPH-201ENST00000381867 GNPATO15228 680 aa15.84■□□□□ 0.13
SNPH-201ENST00000381867 PRPHP41219 470 aa15.84■□□□□ 0.13
SNPH-201ENST00000381867 AFMP43652 599 aa15.84■□□□□ 0.13
SNPH-201ENST00000381867 ARFGAP2Q8N6H7 521 aa15.84■□□□□ 0.13
SNPH-201ENST00000381867 DIP2CQ9Y2E4 1556 aa15.84■□□□□ 0.13
SNPH-201ENST00000381867 PPFIA3O75145 1194 aa15.84■□□□□ 0.13
SNPH-201ENST00000381867 FERP16591 822 aa15.84■□□□□ 0.13
SNPH-201ENST00000381867 ACTN2P35609 894 aa15.84■□□□□ 0.13
SNPH-201ENST00000381867 CDC42BPGQ6DT37 1551 aa15.84■□□□□ 0.13
SNPH-201ENST00000381867 HSP90AA4PQ58FG1 418 aa15.84■□□□□ 0.13
SNPH-201ENST00000381867 FLAD1Q8NFF5 587 aa15.84■□□□□ 0.13
SNPH-201ENST00000381867 FERMT2Q96AC1 680 aa15.84■□□□□ 0.13
SNPH-201ENST00000381867 ALG1Q9BT22 464 aa15.84■□□□□ 0.13
SNPH-201ENST00000381867 CAMSAP1Q5T5Y3 1602 aa15.84■□□□□ 0.13
SNPH-201ENST00000381867 ARHGEF25Q86VW2 580 aa15.84■□□□□ 0.13
SNPH-201ENST00000381867 TSNARE1Q96NA8 513 aa15.84■□□□□ 0.13
SNPH-201ENST00000381867 RBM8AQ9Y5S9 174 aaKnown RBP15.84■□□□□ 0.13
SNPH-201ENST00000381867 SYT10Q6XYQ8 523 aa15.83■□□□□ 0.13
SNPH-201ENST00000381867 TBC1D5Q92609 795 aa15.83■□□□□ 0.13
SNPH-201ENST00000381867 SNRKQ9NRH2 765 aa15.83■□□□□ 0.13
SNPH-201ENST00000381867 NBPF7P0C2Y1 421 aaPredicted RBP15.83■□□□□ 0.12
SNPH-201ENST00000381867 SETBP1Q9Y6X0 1596 aa15.83■□□□□ 0.12
SNPH-201ENST00000381867 CDK12Q9NYV4 1490 aaPredicted RBP15.83■□□□□ 0.12
SNPH-201ENST00000381867 PHKG2P15735 406 aa15.83■□□□□ 0.12
SNPH-201ENST00000381867 STAT6P42226 847 aa15.83■□□□□ 0.12
SNPH-201ENST00000381867 MXRA7P84157 204 aa15.83■□□□□ 0.12
SNPH-201ENST00000381867 KIF5AQ12840 1032 aa15.83■□□□□ 0.12
SNPH-201ENST00000381867 KAT14Q9H8E8 782 aa15.83■□□□□ 0.12
SNPH-201ENST00000381867 ADGRL3Q9HAR2 1447 aa15.83■□□□□ 0.12
SNPH-201ENST00000381867 PSMA7O14818 248 aa15.83■□□□□ 0.12
SNPH-201ENST00000381867 LMOD1P29536 600 aaPredicted RBP15.83■□□□□ 0.12
SNPH-201ENST00000381867 C10orf67Q8IYJ2 551 aa15.83■□□□□ 0.12
SNPH-201ENST00000381867 IQCGQ9H095 443 aaKnown RBP15.83■□□□□ 0.12
SNPH-201ENST00000381867 AOX1Q06278 1338 aa15.82■□□□□ 0.12
SNPH-201ENST00000381867 HDXQ7Z353 690 aa15.82■□□□□ 0.12
SNPH-201ENST00000381867 CERS3Q8IU89 383 aa15.82■□□□□ 0.12
SNPH-201ENST00000381867 SYCP3Q8IZU3 236 aa15.82■□□□□ 0.12
SNPH-201ENST00000381867 PAIP2Q9BPZ3 127 aaKnown RBP15.82■□□□□ 0.12
SNPH-201ENST00000381867 VAT1LQ9HCJ6 419 aa15.82■□□□□ 0.12
SNPH-201ENST00000381867 PDE8AO60658 829 aa15.82■□□□□ 0.12
SNPH-201ENST00000381867 MCMDC2Q4G0Z9 681 aa15.82■□□□□ 0.12
SNPH-201ENST00000381867 CNBD1Q8NA66 436 aa15.82■□□□□ 0.12
SNPH-201ENST00000381867 ERO1AQ96HE7 468 aa15.82■□□□□ 0.12
SNPH-201ENST00000381867 CCDC114Q96M63 670 aa15.82■□□□□ 0.12
SNPH-201ENST00000381867 ZBTB43O43298 467 aa15.81■□□□□ 0.12
SNPH-201ENST00000381867 EIF4A1P60842 406 aaKnown RBP15.81■□□□□ 0.12
SNPH-201ENST00000381867 SLC4A8Q2Y0W8 1093 aa15.81■□□□□ 0.12
SNPH-201ENST00000381867 TRMT1LQ7Z2T5 733 aaKnown RBP15.81■□□□□ 0.12
SNPH-201ENST00000381867 FAM76AQ8TAV0 307 aa15.81■□□□□ 0.12
SNPH-201ENST00000381867 IGSF1Q8N6C5 1336 aa15.81■□□□□ 0.12
SNPH-201ENST00000381867 ALKQ9UM73 1620 aa15.81■□□□□ 0.12
SNPH-201ENST00000381867 TSPY2A6NKD2 308 aa15.81■□□□□ 0.12
SNPH-201ENST00000381867 DAAM2Q86T65 1068 aa15.81■□□□□ 0.12
SNPH-201ENST00000381867 SREK1Q8WXA9 508 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms