RNA–Protein interactions for RNA: ENST00000381108.3

FAM239A-201, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 2 BASIC

Gene FAM239A, Length 2,198 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-201ENST00000381108 RPS6KB1P23443 525 aa13.02□□□□□ -0.33
FAM239A-201ENST00000381108 TSGA10IPQ3SY00 556 aa13.02□□□□□ -0.33
FAM239A-201ENST00000381108 ADGRA1Q86SQ6 560 aa13.02□□□□□ -0.33
FAM239A-201ENST00000381108 NEK1Q96PY6 1258 aa13.02□□□□□ -0.33
FAM239A-201ENST00000381108 LRRC37AA6NMS7 1700 aa13.02□□□□□ -0.33
FAM239A-201ENST00000381108 C6orf229H3BNL8 230 aa13.01□□□□□ -0.33
FAM239A-201ENST00000381108 SEMA3EO15041 775 aa13.01□□□□□ -0.33
FAM239A-201ENST00000381108 CYP7A1P22680 504 aa13.01□□□□□ -0.33
FAM239A-201ENST00000381108 LARGE1O95461 756 aa13.01□□□□□ -0.33
FAM239A-201ENST00000381108 IMMTQ16891 758 aaKnown RBP13.01□□□□□ -0.33
FAM239A-201ENST00000381108 ZNF804AQ7Z570 1209 aa13.01□□□□□ -0.33
FAM239A-201ENST00000381108 LCORLQ8N3X6 602 aa13.01□□□□□ -0.33
FAM239A-201ENST00000381108 STRBPQ96SI9 672 aaKnown RBP13.01□□□□□ -0.33
FAM239A-201ENST00000381108 LRRC2Q9BYS8 371 aa13.01□□□□□ -0.33
FAM239A-201ENST00000381108 POLLQ9UGP5 575 aa13.01□□□□□ -0.33
FAM239A-201ENST00000381108 CTNNA3Q9UI47 895 aa13.01□□□□□ -0.33
FAM239A-201ENST00000381108 LIMCH1Q9UPQ0 1083 aa13.01□□□□□ -0.33
FAM239A-201ENST00000381108 E7EWF7 191 aa13□□□□□ -0.33
FAM239A-201ENST00000381108 ATP2B4P23634 1241 aa13□□□□□ -0.33
FAM239A-201ENST00000381108 PRDX5P30044 214 aa13□□□□□ -0.33
FAM239A-201ENST00000381108 C2CD5Q86YS7 1000 aa13□□□□□ -0.33
FAM239A-201ENST00000381108 TBC1D16Q8TBP0 767 aa13□□□□□ -0.33
FAM239A-201ENST00000381108 MASTLQ96GX5 879 aa13□□□□□ -0.33
FAM239A-201ENST00000381108 DTNBO60941 627 aa13□□□□□ -0.33
FAM239A-201ENST00000381108 CHRNA5P30532 468 aa13□□□□□ -0.33
FAM239A-201ENST00000381108 NAA16Q6N069 864 aaPredicted RBP13□□□□□ -0.33
FAM239A-201ENST00000381108 CIZ1Q9ULV3 898 aaPredicted RBP13□□□□□ -0.33
FAM239A-201ENST00000381108 ATP6V0A2Q9Y487 856 aa13□□□□□ -0.33
FAM239A-201ENST00000381108 LTBP1Q14766 1721 aa12.99□□□□□ -0.33
FAM239A-201ENST00000381108 PRKAB2O43741 272 aa12.99□□□□□ -0.33
FAM239A-201ENST00000381108 ECM2O94769 699 aaPredicted RBP12.99□□□□□ -0.33
FAM239A-201ENST00000381108 ALDH1B1P30837 517 aa12.99□□□□□ -0.33
FAM239A-201ENST00000381108 CUL4AQ13619 759 aa12.99□□□□□ -0.33
FAM239A-201ENST00000381108 PKP1Q13835 747 aa12.99□□□□□ -0.33
FAM239A-201ENST00000381108 SP8Q8IXZ3 490 aa12.99□□□□□ -0.33
FAM239A-201ENST00000381108 ZNF384Q8TF68 577 aa12.99□□□□□ -0.33
FAM239A-201ENST00000381108 ZNF213O14771 459 aa12.98□□□□□ -0.33
FAM239A-201ENST00000381108 RIMBP2O15034 1052 aa12.98□□□□□ -0.33
FAM239A-201ENST00000381108 PTMSP20962 102 aa12.98□□□□□ -0.33
FAM239A-201ENST00000381108 FGD1P98174 961 aa12.98□□□□□ -0.33
FAM239A-201ENST00000381108 MECOMQ03112 1051 aa12.98□□□□□ -0.33
FAM239A-201ENST00000381108 CHST3Q7LGC8 479 aa12.98□□□□□ -0.33
FAM239A-201ENST00000381108 EPB41L4AQ9HCS5 686 aaPredicted RBP12.98□□□□□ -0.33
FAM239A-201ENST00000381108 PODXL2Q9NZ53 605 aa12.98□□□□□ -0.33
FAM239A-201ENST00000381108 TPCN1Q9ULQ1 816 aa12.98□□□□□ -0.33
FAM239A-201ENST00000381108 SLC4A4Q9Y6R1 1079 aa12.98□□□□□ -0.33
FAM239A-201ENST00000381108 CCDC88AQ3V6T2 1871 aa12.98□□□□□ -0.33
FAM239A-201ENST00000381108 PDS5AQ29RF7 1337 aaKnown RBP12.98□□□□□ -0.33
FAM239A-201ENST00000381108 MAGEB6P1A0A0J9YX57 407 aa12.98□□□□□ -0.33
FAM239A-201ENST00000381108 H0YIN7 160 aa12.98□□□□□ -0.33
FAM239A-201ENST00000381108 TOB2Q14106 344 aaPredicted RBP12.98□□□□□ -0.33
FAM239A-201ENST00000381108 Q6ZUG5 572 aa12.98□□□□□ -0.33
FAM239A-201ENST00000381108 TMC4Q7Z404 712 aa12.98□□□□□ -0.33
FAM239A-201ENST00000381108 CCDC83Q8IWF9 413 aa12.98□□□□□ -0.33
FAM239A-201ENST00000381108 IL27Q8NEV9 243 aa12.98□□□□□ -0.33
FAM239A-201ENST00000381108 NSUN4Q96CB9 384 aaKnown RBP12.98□□□□□ -0.33
FAM239A-201ENST00000381108 NAPBQ9H115 298 aa12.98□□□□□ -0.33
FAM239A-201ENST00000381108 CD209Q9NNX6 404 aa12.98□□□□□ -0.33
FAM239A-201ENST00000381108 UTRNP46939 3433 aa12.97□□□□□ -0.33
FAM239A-201ENST00000381108 DYNLL1P63167 89 aaKnown RBP12.97□□□□□ -0.33
FAM239A-201ENST00000381108 ME3Q16798 604 aa12.97□□□□□ -0.33
FAM239A-201ENST00000381108 DZIP1Q86YF9 867 aaKnown RBP12.97□□□□□ -0.33
FAM239A-201ENST00000381108 NECAB1Q8N987 351 aa12.97□□□□□ -0.33
FAM239A-201ENST00000381108 TDRD7Q8NHU6 1098 aaKnown RBP12.97□□□□□ -0.33
FAM239A-201ENST00000381108 SDR42E1Q8WUS8 393 aa12.97□□□□□ -0.33
FAM239A-201ENST00000381108 DUOX1Q9NRD9 1551 aa12.97□□□□□ -0.33
FAM239A-201ENST00000381108 MAST2Q6P0Q8 1798 aa12.97□□□□□ -0.33
FAM239A-201ENST00000381108 PATL2C9JE40 543 aaKnown RBP12.97□□□□□ -0.33
FAM239A-201ENST00000381108 TDO2P48775 406 aa12.97□□□□□ -0.33
FAM239A-201ENST00000381108 STK3Q13188 491 aa12.97□□□□□ -0.33
FAM239A-201ENST00000381108 RAB3GAP1Q15042 981 aa12.97□□□□□ -0.33
FAM239A-201ENST00000381108 DPP8Q6V1X1 898 aaPredicted RBP12.97□□□□□ -0.33
FAM239A-201ENST00000381108 IFNL3Q8IZI9 196 aa12.97□□□□□ -0.33
FAM239A-201ENST00000381108 MPNDQ8N594 471 aa12.97□□□□□ -0.33
FAM239A-201ENST00000381108 NBPF3Q9H094 633 aa12.97□□□□□ -0.33
FAM239A-201ENST00000381108 TMX4Q9H1E5 349 aaPredicted RBP12.97□□□□□ -0.33
FAM239A-201ENST00000381108 CWC22Q9HCG8 908 aaKnown RBP12.97□□□□□ -0.33
FAM239A-201ENST00000381108 GSG1L2A8MUP6 293 aa12.96□□□□□ -0.33
FAM239A-201ENST00000381108 HMGB1P09429 215 aaKnown RBP12.96□□□□□ -0.33
FAM239A-201ENST00000381108 ANKRD1Q15327 319 aa12.96□□□□□ -0.33
FAM239A-201ENST00000381108 C15orf52Q6ZUT6 534 aaKnown RBP12.96□□□□□ -0.33
FAM239A-201ENST00000381108 DHX32Q7L7V1 743 aaKnown RBP12.96□□□□□ -0.33
FAM239A-201ENST00000381108 TBC1D10CQ8IV04 446 aa12.96□□□□□ -0.33
FAM239A-201ENST00000381108 STK11IPQ8N1F8 1099 aa12.96□□□□□ -0.33
FAM239A-201ENST00000381108 TNPO1Q92973 898 aaKnown RBP12.96□□□□□ -0.33
FAM239A-201ENST00000381108 BRF1Q92994 677 aa12.96□□□□□ -0.33
FAM239A-201ENST00000381108 INTS4Q96HW7 963 aaKnown RBP12.96□□□□□ -0.33
FAM239A-201ENST00000381108 AATFQ9NY61 560 aaKnown RBP eCLIP12.96□□□□□ -0.33
FAM239A-201ENST00000381108 SLX4Q8IY92 1834 aa12.96□□□□□ -0.34
FAM239A-201ENST00000381108 LDHBP07195 334 aaKnown RBP12.96□□□□□ -0.34
FAM239A-201ENST00000381108 GNAT2P19087 354 aa12.96□□□□□ -0.34
FAM239A-201ENST00000381108 GRIK5Q16478 980 aa12.96□□□□□ -0.34
FAM239A-201ENST00000381108 FOXD4L5Q5VV16 416 aaPredicted RBP12.96□□□□□ -0.34
FAM239A-201ENST00000381108 WDR66Q8TBY9 1149 aa12.96□□□□□ -0.34
FAM239A-201ENST00000381108 FOXD4L4Q8WXT5 416 aaPredicted RBP12.96□□□□□ -0.34
FAM239A-201ENST00000381108 RIOK1Q9BRS2 568 aaKnown RBP12.96□□□□□ -0.34
FAM239A-201ENST00000381108 CHD4Q14839 1912 aa12.95□□□□□ -0.34
FAM239A-201ENST00000381108 ST3GAL1Q11201 340 aa12.95□□□□□ -0.34
FAM239A-201ENST00000381108 RALYLQ86SE5 291 aaKnown RBP12.95□□□□□ -0.34
FAM239A-201ENST00000381108 FBXW7Q969H0 707 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms