RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 NIP7Q9Y221 180 aaKnown RBP eCLIP9.37□□□□□ -0.91
PDLIM5-204ENST00000380176 LETM1O95202 739 aaPredicted RBP9.37□□□□□ -0.91
PDLIM5-204ENST00000380176 FDPSP14324 419 aaKnown RBP9.37□□□□□ -0.91
PDLIM5-204ENST00000380176 CEBPZQ03701 1054 aaKnown RBP9.37□□□□□ -0.91
PDLIM5-204ENST00000380176 SCAND2PQ9GZW5 306 aaPredicted RBP9.37□□□□□ -0.91
PDLIM5-204ENST00000380176 MROH5Q6ZUA9 1318 aa9.37□□□□□ -0.91
PDLIM5-204ENST00000380176 TCRBV5S4A2TA0A5A2 114 aa9.37□□□□□ -0.91
PDLIM5-204ENST00000380176 ZNF213O14771 459 aa9.37□□□□□ -0.91
PDLIM5-204ENST00000380176 PRC1O43663 620 aa9.37□□□□□ -0.91
PDLIM5-204ENST00000380176 ZMYND10O75800 440 aa9.37□□□□□ -0.91
PDLIM5-204ENST00000380176 NTSR2O95665 410 aa9.37□□□□□ -0.91
PDLIM5-204ENST00000380176 PDE6AP16499 860 aa9.37□□□□□ -0.91
PDLIM5-204ENST00000380176 ADD1P35611 737 aaKnown RBP9.37□□□□□ -0.91
PDLIM5-204ENST00000380176 COL5A3P25940 1745 aaPredicted RBP9.37□□□□□ -0.91
PDLIM5-204ENST00000380176 EVCP57679 992 aa9.36□□□□□ -0.91
PDLIM5-204ENST00000380176 RASGRF1Q13972 1273 aa9.36□□□□□ -0.91
PDLIM5-204ENST00000380176 PTF1AQ7RTS3 328 aa9.36□□□□□ -0.91
PDLIM5-204ENST00000380176 TBC1D10CQ8IV04 446 aa9.36□□□□□ -0.91
PDLIM5-204ENST00000380176 FBXL16Q8N461 479 aa9.36□□□□□ -0.91
PDLIM5-204ENST00000380176 MPHOSPH8Q99549 860 aa9.36□□□□□ -0.91
PDLIM5-204ENST00000380176 DACT1Q9NYF0 836 aa9.36□□□□□ -0.91
PDLIM5-204ENST00000380176 USP25Q9UHP3 1055 aa9.36□□□□□ -0.91
PDLIM5-204ENST00000380176 HPS5Q9UPZ3 1129 aa9.36□□□□□ -0.91
PDLIM5-204ENST00000380176 DOCK2Q92608 1830 aa9.36□□□□□ -0.91
PDLIM5-204ENST00000380176 ATRNO75882 1429 aa9.36□□□□□ -0.91
PDLIM5-204ENST00000380176 WTIPA6NIX2 430 aaPredicted RBP9.36□□□□□ -0.91
PDLIM5-204ENST00000380176 MCM5P33992 734 aa9.36□□□□□ -0.91
PDLIM5-204ENST00000380176 TTF1Q15361 905 aaPredicted RBP9.36□□□□□ -0.91
PDLIM5-204ENST00000380176 FAM98CQ17RN3 349 aaKnown RBP9.36□□□□□ -0.91
PDLIM5-204ENST00000380176 SPATA5Q8NB90 893 aa9.36□□□□□ -0.91
PDLIM5-204ENST00000380176 NCOA7Q8NI08 942 aa9.36□□□□□ -0.91
PDLIM5-204ENST00000380176 AK7Q96M32 723 aa9.36□□□□□ -0.91
PDLIM5-204ENST00000380176 INCENPQ9NQS7 918 aa9.36□□□□□ -0.91
PDLIM5-204ENST00000380176 CASZ1Q86V15 1759 aa9.36□□□□□ -0.91
PDLIM5-204ENST00000380176 CARMIL3Q8ND23 1372 aa9.35□□□□□ -0.91
PDLIM5-204ENST00000380176 KLF18A0A0U1RQI7 1052 aa9.35□□□□□ -0.91
PDLIM5-204ENST00000380176 APPP05067 770 aa9.35□□□□□ -0.91
PDLIM5-204ENST00000380176 BCAMP50895 628 aa9.35□□□□□ -0.91
PDLIM5-204ENST00000380176 HMGN5P82970 282 aaKnown RBP9.35□□□□□ -0.91
PDLIM5-204ENST00000380176 UBE3CQ15386 1083 aa9.35□□□□□ -0.91
PDLIM5-204ENST00000380176 OTUD7BQ6GQQ9 843 aa9.35□□□□□ -0.91
PDLIM5-204ENST00000380176 ZSCAN25Q6NSZ9 544 aa9.35□□□□□ -0.91
PDLIM5-204ENST00000380176 BARGINQ6ZT62 677 aa9.35□□□□□ -0.91
PDLIM5-204ENST00000380176 ILDR1Q86SU0 546 aaPredicted RBP9.35□□□□□ -0.91
PDLIM5-204ENST00000380176 MPNDQ8N594 471 aa9.35□□□□□ -0.91
PDLIM5-204ENST00000380176 ZSCAN16Q9H4T2 348 aaPredicted RBP9.35□□□□□ -0.91
PDLIM5-204ENST00000380176 NR1I2O75469 434 aa9.35□□□□□ -0.91
PDLIM5-204ENST00000380176 UQCRFS1P1P0C7P4 283 aa9.35□□□□□ -0.91
PDLIM5-204ENST00000380176 SLC5A1P13866 664 aa9.35□□□□□ -0.91
PDLIM5-204ENST00000380176 HS1BP3Q53T59 392 aa9.35□□□□□ -0.91
PDLIM5-204ENST00000380176 NAA16Q6N069 864 aaPredicted RBP9.35□□□□□ -0.91
PDLIM5-204ENST00000380176 C3orf67Q6ZVT6 689 aa9.35□□□□□ -0.91
PDLIM5-204ENST00000380176 CYB5R4Q7L1T6 521 aa9.35□□□□□ -0.91
PDLIM5-204ENST00000380176 LINC00116Q8NCU8 138 aa9.35□□□□□ -0.91
PDLIM5-204ENST00000380176 NOL7Q9UMY1 257 aaKnown RBP9.35□□□□□ -0.91
PDLIM5-204ENST00000380176 LAMB2P55268 1798 aa9.35□□□□□ -0.91
PDLIM5-204ENST00000380176 CICQ96RK0 1608 aaPredicted RBP9.35□□□□□ -0.91
PDLIM5-204ENST00000380176 BCORQ6W2J9 1755 aa9.35□□□□□ -0.91
PDLIM5-204ENST00000380176 GOLGA6L4A6NEF3 574 aa9.35□□□□□ -0.91
PDLIM5-204ENST00000380176 PARP10Q53GL7 1025 aa9.35□□□□□ -0.91
PDLIM5-204ENST00000380176 CKAP2LQ8IYA6 745 aa9.35□□□□□ -0.91
PDLIM5-204ENST00000380176 MAGEB6Q8N7X4 407 aa9.35□□□□□ -0.91
PDLIM5-204ENST00000380176 STRBPQ96SI9 672 aaKnown RBP9.35□□□□□ -0.91
PDLIM5-204ENST00000380176 NUP62CLQ9H1M0 184 aa9.35□□□□□ -0.91
PDLIM5-204ENST00000380176 KDM4CQ9H3R0 1056 aa9.35□□□□□ -0.91
PDLIM5-204ENST00000380176 SENP2Q9HC62 589 aa9.35□□□□□ -0.91
PDLIM5-204ENST00000380176 GJB4Q9NTQ9 266 aa9.35□□□□□ -0.91
PDLIM5-204ENST00000380176 CHD4Q14839 1912 aa9.35□□□□□ -0.91
PDLIM5-204ENST00000380176 C4AP0C0L4 1744 aa9.34□□□□□ -0.91
PDLIM5-204ENST00000380176 C4BP0C0L5 1744 aa9.34□□□□□ -0.91
PDLIM5-204ENST00000380176 AP5Z1O43299 807 aa9.34□□□□□ -0.91
PDLIM5-204ENST00000380176 CCDC152Q4G0S7 254 aa9.34□□□□□ -0.91
PDLIM5-204ENST00000380176 RALYLQ86SE5 291 aaKnown RBP9.34□□□□□ -0.91
PDLIM5-204ENST00000380176 EPB41L4AQ9HCS5 686 aaPredicted RBP9.34□□□□□ -0.91
PDLIM5-204ENST00000380176 TACC3Q9Y6A5 838 aa9.34□□□□□ -0.91
PDLIM5-204ENST00000380176 GOLGA8BA8MQT2 603 aa9.34□□□□□ -0.91
PDLIM5-204ENST00000380176 MSNP26038 577 aaKnown RBP9.34□□□□□ -0.91
PDLIM5-204ENST00000380176 CHRNDQ07001 517 aa9.34□□□□□ -0.91
PDLIM5-204ENST00000380176 UVSSAQ2YD98 709 aa9.34□□□□□ -0.91
PDLIM5-204ENST00000380176 USP28Q96RU2 1077 aa9.34□□□□□ -0.91
PDLIM5-204ENST00000380176 BCCIPQ9P287 314 aaKnown RBP eCLIP9.34□□□□□ -0.91
PDLIM5-204ENST00000380176 IQSEC3Q9UPP2 1182 aaPredicted RBP9.34□□□□□ -0.91
PDLIM5-204ENST00000380176 B4E1Z4 1266 aa9.33□□□□□ -0.92
PDLIM5-204ENST00000380176 ERFEQ4G0M1 354 aa9.33□□□□□ -0.92
PDLIM5-204ENST00000380176 BICD2Q8TD16 824 aa9.33□□□□□ -0.92
PDLIM5-204ENST00000380176 AIDAQ96BJ3 306 aa9.33□□□□□ -0.92
PDLIM5-204ENST00000380176 ARMT1Q9H993 441 aa9.33□□□□□ -0.92
PDLIM5-204ENST00000380176 NEDD4P46934 1319 aa9.33□□□□□ -0.92
PDLIM5-204ENST00000380176 PRKAB2O43741 272 aa9.33□□□□□ -0.92
PDLIM5-204ENST00000380176 MBD4O95243 580 aa9.33□□□□□ -0.92
PDLIM5-204ENST00000380176 ADCY5O95622 1261 aa9.33□□□□□ -0.92
PDLIM5-204ENST00000380176 RXRAP19793 462 aa9.33□□□□□ -0.92
PDLIM5-204ENST00000380176 IGHMBP2P38935 993 aaKnown RBP9.33□□□□□ -0.92
PDLIM5-204ENST00000380176 MAP3K11Q16584 847 aa9.33□□□□□ -0.92
PDLIM5-204ENST00000380176 TNMDQ9H2S6 317 aa9.33□□□□□ -0.92
PDLIM5-204ENST00000380176 WDR70Q9NW82 654 aa9.33□□□□□ -0.92
PDLIM5-204ENST00000380176 CFAP45Q9UL16 551 aa9.33□□□□□ -0.92
PDLIM5-204ENST00000380176 A0A1B0GUL6 1792 aa9.33□□□□□ -0.92
PDLIM5-204ENST00000380176 KDM4AO75164 1064 aa9.33□□□□□ -0.92
PDLIM5-204ENST00000380176 CTDSPL2Q05D32 466 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms