RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 CCDC183Q5T5S1 534 aa12.35□□□□□ -0.43
POLR2J3-201ENST00000379340 SLC9C2Q5TAH2 1124 aa12.35□□□□□ -0.43
POLR2J3-201ENST00000379340 SPATA5Q8NB90 893 aa12.35□□□□□ -0.43
POLR2J3-201ENST00000379340 NCOA7Q8NI08 942 aa12.35□□□□□ -0.43
POLR2J3-201ENST00000379340 NYXQ9GZU5 481 aa12.35□□□□□ -0.43
POLR2J3-201ENST00000379340 PUS7LQ9H0K6 701 aaKnown RBP12.35□□□□□ -0.43
POLR2J3-201ENST00000379340 ZSCAN16Q9H4T2 348 aaPredicted RBP12.35□□□□□ -0.43
POLR2J3-201ENST00000379340 NMRK2Q9NPI5 230 aa12.35□□□□□ -0.43
POLR2J3-201ENST00000379340 NSFL1CQ9UNZ2 370 aaKnown RBP12.35□□□□□ -0.43
POLR2J3-201ENST00000379340 ZNF213O14771 459 aa12.34□□□□□ -0.43
POLR2J3-201ENST00000379340 FOXP2O15409 715 aa12.34□□□□□ -0.43
POLR2J3-201ENST00000379340 FGAP02671 866 aa12.34□□□□□ -0.43
POLR2J3-201ENST00000379340 PDE6AP16499 860 aa12.34□□□□□ -0.43
POLR2J3-201ENST00000379340 MCM5P33992 734 aa12.34□□□□□ -0.43
POLR2J3-201ENST00000379340 MAP3K12Q12852 859 aa12.34□□□□□ -0.43
POLR2J3-201ENST00000379340 ALX1Q15699 326 aa12.34□□□□□ -0.43
POLR2J3-201ENST00000379340 SLC10A5Q5PT55 438 aa12.34□□□□□ -0.43
POLR2J3-201ENST00000379340 PI16Q6UXB8 463 aa12.34□□□□□ -0.43
POLR2J3-201ENST00000379340 RALYLQ86SE5 291 aaKnown RBP12.34□□□□□ -0.43
POLR2J3-201ENST00000379340 PIAS4Q8N2W9 510 aaPredicted RBP12.34□□□□□ -0.43
POLR2J3-201ENST00000379340 FAM184AQ8NB25 1140 aa12.34□□□□□ -0.43
POLR2J3-201ENST00000379340 SCAND2PQ9GZW5 306 aaPredicted RBP12.34□□□□□ -0.43
POLR2J3-201ENST00000379340 PIH1D3Q9NQM4 214 aaKnown RBP12.34□□□□□ -0.43
POLR2J3-201ENST00000379340 MYO5AQ9Y4I1 1855 aaKnown RBP12.34□□□□□ -0.43
POLR2J3-201ENST00000379340 MYH15Q9Y2K3 1946 aa12.33□□□□□ -0.44
POLR2J3-201ENST00000379340 C4BP0C0L5 1744 aa12.33□□□□□ -0.44
POLR2J3-201ENST00000379340 FAM177BA6PVY3 158 aa12.33□□□□□ -0.44
POLR2J3-201ENST00000379340 FIBPO43427 364 aa12.33□□□□□ -0.44
POLR2J3-201ENST00000379340 GADD45BO75293 160 aaPredicted RBP12.33□□□□□ -0.44
POLR2J3-201ENST00000379340 RPS6KA4O75676 772 aa12.33□□□□□ -0.44
POLR2J3-201ENST00000379340 IDH1O75874 414 aaKnown RBP12.33□□□□□ -0.44
POLR2J3-201ENST00000379340 DNM1Q05193 864 aaKnown RBP12.33□□□□□ -0.44
POLR2J3-201ENST00000379340 SCRN1Q12765 414 aa12.33□□□□□ -0.44
POLR2J3-201ENST00000379340 FOXD4L6Q3SYB3 417 aaPredicted RBP12.33□□□□□ -0.44
POLR2J3-201ENST00000379340 NAA16Q6N069 864 aaPredicted RBP12.33□□□□□ -0.44
POLR2J3-201ENST00000379340 FOXD4L3Q6VB84 417 aaPredicted RBP12.33□□□□□ -0.44
POLR2J3-201ENST00000379340 CDC37L1Q7L3B6 337 aa12.33□□□□□ -0.44
POLR2J3-201ENST00000379340 MB21D2Q8IYB1 491 aaPredicted RBP12.33□□□□□ -0.44
POLR2J3-201ENST00000379340 RGS22Q8NE09 1264 aa12.33□□□□□ -0.44
POLR2J3-201ENST00000379340 GDPD2Q9HCC8 539 aa12.33□□□□□ -0.44
POLR2J3-201ENST00000379340 SEC31BQ9NQW1 1179 aa12.33□□□□□ -0.44
POLR2J3-201ENST00000379340 NARFQ9UHQ1 456 aa12.33□□□□□ -0.44
POLR2J3-201ENST00000379340 ZNF532Q9HCE3 1301 aa12.32□□□□□ -0.44
POLR2J3-201ENST00000379340 TCRBV5S4A2TA0A5A2 114 aa12.32□□□□□ -0.44
POLR2J3-201ENST00000379340 SYCE3A1L190 88 aa12.32□□□□□ -0.44
POLR2J3-201ENST00000379340 DHX16O60231 1041 aaKnown RBP12.32□□□□□ -0.44
POLR2J3-201ENST00000379340 TOMM70O94826 608 aa12.32□□□□□ -0.44
POLR2J3-201ENST00000379340 CHRNDQ07001 517 aa12.32□□□□□ -0.44
POLR2J3-201ENST00000379340 APOBRQ0VD83 1088 aa12.32□□□□□ -0.44
POLR2J3-201ENST00000379340 TRDNQ13061 729 aa12.32□□□□□ -0.44
POLR2J3-201ENST00000379340 TTLL5Q6EMB2 1281 aa12.32□□□□□ -0.44
POLR2J3-201ENST00000379340 ANKRD18AQ8IVF6 992 aa12.32□□□□□ -0.44
POLR2J3-201ENST00000379340 NSUN7Q8NE18 718 aaKnown RBP12.32□□□□□ -0.44
POLR2J3-201ENST00000379340 PPP1R9BQ96SB3 815 aa12.32□□□□□ -0.44
POLR2J3-201ENST00000379340 TSPY26PQ9H489 355 aa12.32□□□□□ -0.44
POLR2J3-201ENST00000379340 TIAM2Q8IVF5 1701 aa12.32□□□□□ -0.44
POLR2J3-201ENST00000379340 WDR90Q96KV7 1748 aa12.32□□□□□ -0.44
POLR2J3-201ENST00000379340 UBR3Q6ZT12 1888 aa12.32□□□□□ -0.44
POLR2J3-201ENST00000379340 KIAA1551Q9HCM1 1747 aa12.31□□□□□ -0.44
POLR2J3-201ENST00000379340 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.31□□□□□ -0.44
POLR2J3-201ENST00000379340 H3BQV1 296 aa12.31□□□□□ -0.44
POLR2J3-201ENST00000379340 GNAT2P19087 354 aa12.31□□□□□ -0.44
POLR2J3-201ENST00000379340 PDIA3P30101 505 aaKnown RBP12.31□□□□□ -0.44
POLR2J3-201ENST00000379340 RASGRF1Q13972 1273 aa12.31□□□□□ -0.44
POLR2J3-201ENST00000379340 UBE4AQ14139 1066 aa12.31□□□□□ -0.44
POLR2J3-201ENST00000379340 HELBQ8NG08 1087 aaPredicted RBP12.31□□□□□ -0.44
POLR2J3-201ENST00000379340 AIDAQ96BJ3 306 aa12.31□□□□□ -0.44
POLR2J3-201ENST00000379340 LRRC2Q9BYS8 371 aa12.31□□□□□ -0.44
POLR2J3-201ENST00000379340 GNL3LQ9NVN8 582 aaKnown RBP12.31□□□□□ -0.44
POLR2J3-201ENST00000379340 BSDC1Q9NW68 430 aaPredicted RBP12.31□□□□□ -0.44
POLR2J3-201ENST00000379340 CARMIL3Q8ND23 1372 aa12.31□□□□□ -0.44
POLR2J3-201ENST00000379340 SALL1Q9NSC2 1324 aa12.31□□□□□ -0.44
POLR2J3-201ENST00000379340 PTPDC1A2A3K4 754 aa12.3□□□□□ -0.44
POLR2J3-201ENST00000379340 PRC1O43663 620 aa12.3□□□□□ -0.44
POLR2J3-201ENST00000379340 JAK2O60674 1132 aa12.3□□□□□ -0.44
POLR2J3-201ENST00000379340 ERFEQ4G0M1 354 aa12.3□□□□□ -0.44
POLR2J3-201ENST00000379340 ATL3Q6DD88 541 aa12.3□□□□□ -0.44
POLR2J3-201ENST00000379340 FLAD1Q8NFF5 587 aa12.3□□□□□ -0.44
POLR2J3-201ENST00000379340 RBSNQ9H1K0 784 aa12.3□□□□□ -0.44
POLR2J3-201ENST00000379340 ZNF804BA4D1E1 1349 aa12.3□□□□□ -0.44
POLR2J3-201ENST00000379340 PATL2C9JE40 543 aaKnown RBP12.3□□□□□ -0.44
POLR2J3-201ENST00000379340 RESTQ13127 1097 aa12.3□□□□□ -0.44
POLR2J3-201ENST00000379340 TRIM44Q96DX7 344 aaPredicted RBP12.3□□□□□ -0.44
POLR2J3-201ENST00000379340 STRBPQ96SI9 672 aaKnown RBP12.3□□□□□ -0.44
POLR2J3-201ENST00000379340 A0A0G2JLW4 131 aa12.29□□□□□ -0.44
POLR2J3-201ENST00000379340 ZBTB22O15209 634 aa12.29□□□□□ -0.44
POLR2J3-201ENST00000379340 ZPR1O75312 459 aa12.29□□□□□ -0.44
POLR2J3-201ENST00000379340 GTF2E1P29083 439 aaPredicted RBP12.29□□□□□ -0.44
POLR2J3-201ENST00000379340 HAND2P61296 217 aa12.29□□□□□ -0.44
POLR2J3-201ENST00000379340 TMED8Q6PL24 325 aaPredicted RBP12.29□□□□□ -0.44
POLR2J3-201ENST00000379340 KLRG1Q96E93 195 aa12.29□□□□□ -0.44
POLR2J3-201ENST00000379340 TMEM87BQ96K49 555 aa12.29□□□□□ -0.44
POLR2J3-201ENST00000379340 CFAP45Q9UL16 551 aa12.29□□□□□ -0.44
POLR2J3-201ENST00000379340 SEMA3EO15041 775 aa12.28□□□□□ -0.44
POLR2J3-201ENST00000379340 CTDNEP1O95476 244 aa12.28□□□□□ -0.44
POLR2J3-201ENST00000379340 UVSSAQ2YD98 709 aa12.28□□□□□ -0.44
POLR2J3-201ENST00000379340 TBC1D9BQ66K14 1250 aa12.28□□□□□ -0.44
POLR2J3-201ENST00000379340 TTC6Q86TZ1 520 aa12.28□□□□□ -0.44
POLR2J3-201ENST00000379340 FERMT3Q86UX7 667 aa12.28□□□□□ -0.44
POLR2J3-201ENST00000379340 MAGEB6Q8N7X4 407 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms