RNA–Protein interactions for RNA: ENST00000378980.7

CNTFR-202, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 2,052 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-202ENST00000378980 RGL2O15211 777 aa25.14■■□□□ 1.61
CNTFR-202ENST00000378980 DHX16O60231 1041 aaKnown RBP25.14■■□□□ 1.61
CNTFR-202ENST00000378980 TAF1P21675 1872 aa25.14■■□□□ 1.61
CNTFR-202ENST00000378980 PPFIA3O75145 1194 aa25.13■■□□□ 1.61
CNTFR-202ENST00000378980 MBD4O95243 580 aa25.13■■□□□ 1.61
CNTFR-202ENST00000378980 DENND2AQ9ULE3 1009 aa25.13■■□□□ 1.61
CNTFR-202ENST00000378980 TIAM2Q8IVF5 1701 aa25.13■■□□□ 1.61
CNTFR-202ENST00000378980 SF3B3Q15393 1217 aaKnown RBP25.13■■□□□ 1.61
CNTFR-202ENST00000378980 DDX19AQ9NUU7 478 aaKnown RBP25.13■■□□□ 1.61
CNTFR-202ENST00000378980 DACT1Q9NYF0 836 aa25.13■■□□□ 1.61
CNTFR-202ENST00000378980 PATL2C9JE40 543 aaKnown RBP25.12■■□□□ 1.61
CNTFR-202ENST00000378980 KCNQ4P56696 695 aa25.12■■□□□ 1.61
CNTFR-202ENST00000378980 MAP3K11Q16584 847 aa25.12■■□□□ 1.61
CNTFR-202ENST00000378980 ATL3Q6DD88 541 aa25.12■■□□□ 1.61
CNTFR-202ENST00000378980 C3orf67Q6ZVT6 689 aa25.12■■□□□ 1.61
CNTFR-202ENST00000378980 CYB5R4Q7L1T6 521 aa25.12■■□□□ 1.61
CNTFR-202ENST00000378980 EPB41L4AQ9HCS5 686 aaPredicted RBP25.12■■□□□ 1.61
CNTFR-202ENST00000378980 ANGEL1Q9UNK9 670 aaKnown RBP25.12■■□□□ 1.61
CNTFR-202ENST00000378980 NKX2-3Q8TAU0 364 aa25.11■■□□□ 1.61
CNTFR-202ENST00000378980 CCDC192P0DO97 292 aa25.11■■□□□ 1.61
CNTFR-202ENST00000378980 ANKRD18AQ8IVF6 992 aa25.11■■□□□ 1.61
CNTFR-202ENST00000378980 NHSQ6T4R5 1651 aa25.1■■□□□ 1.61
CNTFR-202ENST00000378980 SH2B2O14492 632 aaPredicted RBP25.1■■□□□ 1.61
CNTFR-202ENST00000378980 GUCY1B3Q02153 619 aa25.1■■□□□ 1.61
CNTFR-202ENST00000378980 IFNL3Q8IZI9 196 aa25.1■■□□□ 1.61
CNTFR-202ENST00000378980 BICD2Q8TD16 824 aa25.1■■□□□ 1.61
CNTFR-202ENST00000378980 ARMT1Q9H993 441 aa25.1■■□□□ 1.61
CNTFR-202ENST00000378980 RCOR1Q9UKL0 485 aa25.1■■□□□ 1.61
CNTFR-202ENST00000378980 NEDD4P46934 1319 aa25.1■■□□□ 1.61
CNTFR-202ENST00000378980 THSD7AQ9UPZ6 1657 aa25.1■■□□□ 1.61
CNTFR-202ENST00000378980 COL24A1Q17RW2 1714 aa25.1■■□□□ 1.61
CNTFR-202ENST00000378980 PTF1AQ7RTS3 328 aa25.09■■□□□ 1.61
CNTFR-202ENST00000378980 ILDR1Q86SU0 546 aaPredicted RBP25.09■■□□□ 1.61
CNTFR-202ENST00000378980 FNBP4Q8N3X1 1017 aaPredicted RBP25.09■■□□□ 1.61
CNTFR-202ENST00000378980 ZNF396Q96N95 335 aaPredicted RBP25.09■■□□□ 1.61
CNTFR-202ENST00000378980 CLSTN2Q9H4D0 955 aa25.09■■□□□ 1.61
CNTFR-202ENST00000378980 NOL7Q9UMY1 257 aaKnown RBP25.09■■□□□ 1.61
CNTFR-202ENST00000378980 ZNF804BA4D1E1 1349 aa25.09■■□□□ 1.61
CNTFR-202ENST00000378980 NAPBQ9H115 298 aa25.09■■□□□ 1.61
CNTFR-202ENST00000378980 TNMDQ9H2S6 317 aa25.09■■□□□ 1.61
CNTFR-202ENST00000378980 BCL2L12Q9HB09 334 aa25.09■■□□□ 1.61
CNTFR-202ENST00000378980 CCDC39Q9UFE4 941 aa25.09■■□□□ 1.61
CNTFR-202ENST00000378980 B4E1Z4 1266 aa25.08■■□□□ 1.61
CNTFR-202ENST00000378980 UBAP1LF5GYI3 381 aa25.08■■□□□ 1.61
CNTFR-202ENST00000378980 CPLX1O14810 134 aa25.08■■□□□ 1.61
CNTFR-202ENST00000378980 CAMK4Q16566 473 aa25.08■■□□□ 1.61
CNTFR-202ENST00000378980 RC3H1Q5TC82 1133 aaKnown RBP25.08■■□□□ 1.61
CNTFR-202ENST00000378980 RBM43Q6ZSC3 357 aaKnown RBP25.08■■□□□ 1.61
CNTFR-202ENST00000378980 RAB11FIP4Q86YS3 637 aa25.08■■□□□ 1.61
CNTFR-202ENST00000378980 USP28Q96RU2 1077 aa25.08■■□□□ 1.61
CNTFR-202ENST00000378980 BSDC1Q9NW68 430 aaPredicted RBP25.08■■□□□ 1.61
CNTFR-202ENST00000378980 PNPLA7Q6ZV29 1317 aa25.08■■□□□ 1.61
CNTFR-202ENST00000378980 NR1I2O75469 434 aa25.08■■□□□ 1.6
CNTFR-202ENST00000378980 MSNP26038 577 aaKnown RBP25.08■■□□□ 1.6
CNTFR-202ENST00000378980 CEBPZQ03701 1054 aaKnown RBP25.08■■□□□ 1.6
CNTFR-202ENST00000378980 TBC1D9BQ66K14 1250 aa25.08■■□□□ 1.6
CNTFR-202ENST00000378980 TMEM87BQ96K49 555 aa25.08■■□□□ 1.6
CNTFR-202ENST00000378980 FTOQ9C0B1 505 aaKnown RBP eCLIP25.08■■□□□ 1.6
CNTFR-202ENST00000378980 ORC3Q9UBD5 711 aaPredicted RBP25.08■■□□□ 1.6
CNTFR-202ENST00000378980 USP25Q9UHP3 1055 aa25.08■■□□□ 1.6
CNTFR-202ENST00000378980 GSG1L2A8MUP6 293 aa25.07■■□□□ 1.6
CNTFR-202ENST00000378980 GNAT2P19087 354 aa25.07■■□□□ 1.6
CNTFR-202ENST00000378980 SLC10A5Q5PT55 438 aa25.07■■□□□ 1.6
CNTFR-202ENST00000378980 C8orf76Q96K31 380 aa25.07■■□□□ 1.6
CNTFR-202ENST00000378980 UBE4AQ14139 1066 aa25.06■■□□□ 1.6
CNTFR-202ENST00000378980 BICDL1Q6ZP65 573 aa25.06■■□□□ 1.6
CNTFR-202ENST00000378980 LCORLQ8N3X6 602 aa25.06■■□□□ 1.6
CNTFR-202ENST00000378980 LRP2BPQ9P2M1 347 aa25.06■■□□□ 1.6
CNTFR-202ENST00000378980 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.06■■□□□ 1.6
CNTFR-202ENST00000378980 NARFQ9UHQ1 456 aa25.06■■□□□ 1.6
CNTFR-202ENST00000378980 RPS6KA4O75676 772 aa25.05■■□□□ 1.6
CNTFR-202ENST00000378980 SMIM5Q71RC9 77 aa25.05■■□□□ 1.6
CNTFR-202ENST00000378980 FBXO18Q8NFZ0 1043 aa25.05■■□□□ 1.6
CNTFR-202ENST00000378980 IGDCC4Q8TDY8 1250 aa25.05■■□□□ 1.6
CNTFR-202ENST00000378980 TYRO3Q06418 890 aa25.05■■□□□ 1.6
CNTFR-202ENST00000378980 APOA5Q6Q788 366 aa25.05■■□□□ 1.6
CNTFR-202ENST00000378980 ECM29Q5VYK3 1845 aa25.04■■□□□ 1.6
CNTFR-202ENST00000378980 COL1A1P02452 1464 aaPredicted RBP25.04■■□□□ 1.6
CNTFR-202ENST00000378980 PRKAB2O43741 272 aa25.04■■□□□ 1.6
CNTFR-202ENST00000378980 KDM4AO75164 1064 aa25.04■■□□□ 1.6
CNTFR-202ENST00000378980 METAP2P50579 478 aaKnown RBP eCLIP25.04■■□□□ 1.6
CNTFR-202ENST00000378980 CTDSPL2Q05D32 466 aa25.04■■□□□ 1.6
CNTFR-202ENST00000378980 GNL3LQ9NVN8 582 aaKnown RBP25.04■■□□□ 1.6
CNTFR-202ENST00000378980 MINPP1Q9UNW1 487 aa25.04■■□□□ 1.6
CNTFR-202ENST00000378980 ZKSCAN5Q9Y2L8 839 aa25.04■■□□□ 1.6
CNTFR-202ENST00000378980 MRVI1Q9Y6F6 885 aa25.04■■□□□ 1.6
CNTFR-202ENST00000378980 SLC4A4Q9Y6R1 1079 aa25.04■■□□□ 1.6
CNTFR-202ENST00000378980 GTF2E1P29083 439 aaPredicted RBP25.03■■□□□ 1.6
CNTFR-202ENST00000378980 GYG1P46976 350 aa25.03■■□□□ 1.6
CNTFR-202ENST00000378980 OTUD7BQ6GQQ9 843 aa25.03■■□□□ 1.6
CNTFR-202ENST00000378980 SGMS1Q86VZ5 419 aa25.03■■□□□ 1.6
CNTFR-202ENST00000378980 CKAP2LQ8IYA6 745 aa25.03■■□□□ 1.6
CNTFR-202ENST00000378980 RGS22Q8NE09 1264 aa25.03■■□□□ 1.6
CNTFR-202ENST00000378980 NACAP1Q9BZK3 213 aa25.03■■□□□ 1.6
CNTFR-202ENST00000378980 NYXQ9GZU5 481 aa25.03■■□□□ 1.6
CNTFR-202ENST00000378980 CNNM2Q9H8M5 875 aa25.03■■□□□ 1.6
CNTFR-202ENST00000378980 LY9Q9HBG7 655 aa25.03■■□□□ 1.6
CNTFR-202ENST00000378980 SENP2Q9HC62 589 aa25.03■■□□□ 1.6
CNTFR-202ENST00000378980 IQSEC3Q9UPP2 1182 aaPredicted RBP25.03■■□□□ 1.6
CNTFR-202ENST00000378980 TACC3Q9Y6A5 838 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms