RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 AMOTL2Q9Y2J4 779 aa18.27■□□□□ 0.52
CKAP4-201ENST00000378026 IKBKBO14920 756 aa18.26■□□□□ 0.51
CKAP4-201ENST00000378026 LTKP29376 864 aa18.26■□□□□ 0.51
CKAP4-201ENST00000378026 MTF1Q14872 753 aa18.26■□□□□ 0.51
CKAP4-201ENST00000378026 AXDND1Q5T1B0 1012 aaPredicted RBP18.26■□□□□ 0.51
CKAP4-201ENST00000378026 GOLGA5Q8TBA6 731 aa18.26■□□□□ 0.51
CKAP4-201ENST00000378026 AIFM3Q96NN9 605 aa18.26■□□□□ 0.51
CKAP4-201ENST00000378026 CLIC6Q96NY7 704 aa18.26■□□□□ 0.51
CKAP4-201ENST00000378026 DHX8Q14562 1220 aaKnown RBP18.26■□□□□ 0.51
CKAP4-201ENST00000378026 OLFM4Q6UX06 510 aa18.26■□□□□ 0.51
CKAP4-201ENST00000378026 RSRC2Q7L4I2 434 aaKnown RBP18.26■□□□□ 0.51
CKAP4-201ENST00000378026 SRLQ86TD4 932 aa18.26■□□□□ 0.51
CKAP4-201ENST00000378026 TMEM139Q8IV31 216 aa18.26■□□□□ 0.51
CKAP4-201ENST00000378026 YEATS4O95619 227 aa18.26■□□□□ 0.51
CKAP4-201ENST00000378026 HSPD1P10809 573 aaKnown RBP18.26■□□□□ 0.51
CKAP4-201ENST00000378026 SLC39A6Q13433 755 aa18.26■□□□□ 0.51
CKAP4-201ENST00000378026 SPECC1Q5M775 1068 aa18.26■□□□□ 0.51
CKAP4-201ENST00000378026 LEKR1Q6ZMV7 388 aa18.26■□□□□ 0.51
CKAP4-201ENST00000378026 POLR3EQ9NVU0 708 aa18.26■□□□□ 0.51
CKAP4-201ENST00000378026 KLF18A0A0U1RQI7 1052 aa18.25■□□□□ 0.51
CKAP4-201ENST00000378026 GOLGA8BA8MQT2 603 aa18.25■□□□□ 0.51
CKAP4-201ENST00000378026 TFRCP02786 760 aaKnown RBP18.25■□□□□ 0.51
CKAP4-201ENST00000378026 PTPN12Q05209 780 aaKnown RBP18.25■□□□□ 0.51
CKAP4-201ENST00000378026 C1orf141Q5JVX7 400 aa18.25■□□□□ 0.51
CKAP4-201ENST00000378026 UBE3BQ7Z3V4 1068 aa18.25■□□□□ 0.51
CKAP4-201ENST00000378026 KBTBD3Q8NAB2 608 aa18.25■□□□□ 0.51
CKAP4-201ENST00000378026 INTS13Q9NVM9 706 aa18.25■□□□□ 0.51
CKAP4-201ENST00000378026 NEURL1BA8MQ27 555 aa18.25■□□□□ 0.51
CKAP4-201ENST00000378026 ACTN2P35609 894 aa18.25■□□□□ 0.51
CKAP4-201ENST00000378026 TIMM10P62072 90 aa18.25■□□□□ 0.51
CKAP4-201ENST00000378026 RABGGTAQ92696 567 aa18.25■□□□□ 0.51
CKAP4-201ENST00000378026 EXOC4Q96A65 974 aa18.25■□□□□ 0.51
CKAP4-201ENST00000378026 ZNF274Q96GC6 653 aaPredicted RBP18.25■□□□□ 0.51
CKAP4-201ENST00000378026 HAUS7Q99871 368 aa18.25■□□□□ 0.51
CKAP4-201ENST00000378026 A0A0U1RQJ8 604 aa18.24■□□□□ 0.51
CKAP4-201ENST00000378026 FOXN1O15353 648 aa18.24■□□□□ 0.51
CKAP4-201ENST00000378026 CMA1P23946 247 aa18.24■□□□□ 0.51
CKAP4-201ENST00000378026 PDE4BQ07343 736 aa18.24■□□□□ 0.51
CKAP4-201ENST00000378026 GCKRQ14397 625 aa18.24■□□□□ 0.51
CKAP4-201ENST00000378026 ATRIPQ8WXE1 791 aa18.24■□□□□ 0.51
CKAP4-201ENST00000378026 NWD1Q149M9 1564 aa18.24■□□□□ 0.51
CKAP4-201ENST00000378026 ATP5J2-PTCD1G3V325 749 aa18.24■□□□□ 0.51
CKAP4-201ENST00000378026 RNMTO43148 476 aaKnown RBP18.24■□□□□ 0.51
CKAP4-201ENST00000378026 PTCD1O75127 700 aaKnown RBP18.24■□□□□ 0.51
CKAP4-201ENST00000378026 CDC27P30260 824 aa18.24■□□□□ 0.51
CKAP4-201ENST00000378026 TXLNAP40222 546 aa18.24■□□□□ 0.51
CKAP4-201ENST00000378026 TRMT44Q8IYL2 757 aaKnown RBP18.24■□□□□ 0.51
CKAP4-201ENST00000378026 XAGE3Q8WTP9 111 aa18.24■□□□□ 0.51
CKAP4-201ENST00000378026 CPLX3Q8WVH0 158 aa18.24■□□□□ 0.51
CKAP4-201ENST00000378026 PLEKHA4Q9H4M7 779 aa18.24■□□□□ 0.51
CKAP4-201ENST00000378026 AGLP35573 1532 aa18.24■□□□□ 0.51
CKAP4-201ENST00000378026 DHX16O60231 1041 aaKnown RBP18.24■□□□□ 0.51
CKAP4-201ENST00000378026 IRX3P78415 501 aaPredicted RBP18.24■□□□□ 0.51
CKAP4-201ENST00000378026 AKAP4Q5JQC9 854 aa18.24■□□□□ 0.51
CKAP4-201ENST00000378026 COPS6Q7L5N1 327 aa18.24■□□□□ 0.51
CKAP4-201ENST00000378026 RHOXF2BP0C7M4 288 aa18.23■□□□□ 0.51
CKAP4-201ENST00000378026 RXRAP19793 462 aa18.23■□□□□ 0.51
CKAP4-201ENST00000378026 HSP90AB3PQ58FF7 597 aa18.23■□□□□ 0.51
CKAP4-201ENST00000378026 KIFC2Q96AC6 838 aa18.23■□□□□ 0.51
CKAP4-201ENST00000378026 RHOXF2Q9BQY4 288 aa18.23■□□□□ 0.51
CKAP4-201ENST00000378026 MRPL44Q9H9J2 332 aaKnown RBP18.23■□□□□ 0.51
CKAP4-201ENST00000378026 CHMP4BP1P59074 171 aa18.23■□□□□ 0.51
CKAP4-201ENST00000378026 ZNF827Q17R98 1081 aa18.23■□□□□ 0.51
CKAP4-201ENST00000378026 PAG1Q9NWQ8 432 aa18.23■□□□□ 0.51
CKAP4-201ENST00000378026 FAN1Q9Y2M0 1017 aa18.23■□□□□ 0.51
CKAP4-201ENST00000378026 AGXT2Q9BYV1 514 aa18.22■□□□□ 0.51
CKAP4-201ENST00000378026 PCDHA5Q9Y5H7 936 aa18.22■□□□□ 0.51
CKAP4-201ENST00000378026 LONRF3Q496Y0 759 aa18.22■□□□□ 0.51
CKAP4-201ENST00000378026 SHC4Q6S5L8 630 aa18.22■□□□□ 0.51
CKAP4-201ENST00000378026 FOXP4Q8IVH2 680 aaPredicted RBP18.22■□□□□ 0.51
CKAP4-201ENST00000378026 CCDC102AQ96A19 550 aa18.22■□□□□ 0.51
CKAP4-201ENST00000378026 DDX21Q9NR30 783 aaKnown RBP eCLIP18.22■□□□□ 0.51
CKAP4-201ENST00000378026 PLEKHO1Q53GL0 409 aaPredicted RBP18.21■□□□□ 0.51
CKAP4-201ENST00000378026 TC2NQ8N9U0 490 aa18.21■□□□□ 0.51
CKAP4-201ENST00000378026 CNNM3Q8NE01 707 aa18.21■□□□□ 0.51
CKAP4-201ENST00000378026 UTYO14607 1347 aa18.21■□□□□ 0.51
CKAP4-201ENST00000378026 SOWAHDA6NJG2 315 aa18.21■□□□□ 0.51
CKAP4-201ENST00000378026 KIF23Q02241 960 aaPredicted RBP18.21■□□□□ 0.51
CKAP4-201ENST00000378026 JAKMIP3Q5VZ66 844 aa18.21■□□□□ 0.51
CKAP4-201ENST00000378026 PNKPQ96T60 521 aa18.21■□□□□ 0.51
CKAP4-201ENST00000378026 COPRSQ9NQ92 184 aa18.21■□□□□ 0.51
CKAP4-201ENST00000378026 PTPRUQ92729 1446 aa18.21■□□□□ 0.51
CKAP4-201ENST00000378026 CCDC151A5D8V7 595 aa18.21■□□□□ 0.51
CKAP4-201ENST00000378026 FCHSD1Q86WN1 690 aa18.21■□□□□ 0.51
CKAP4-201ENST00000378026 TUBE1Q9UJT0 475 aa18.21■□□□□ 0.51
CKAP4-201ENST00000378026 MYH15Q9Y2K3 1946 aa18.21■□□□□ 0.5
CKAP4-201ENST00000378026 NOP2P46087 812 aaKnown RBP18.2■□□□□ 0.5
CKAP4-201ENST00000378026 BRAPQ7Z569 592 aa18.2■□□□□ 0.5
CKAP4-201ENST00000378026 METTL16Q86W50 562 aaKnown RBP18.2■□□□□ 0.5
CKAP4-201ENST00000378026 DSCC1Q9BVC3 393 aa18.2■□□□□ 0.5
CKAP4-201ENST00000378026 TOMM22Q9NS69 142 aa18.2■□□□□ 0.5
CKAP4-201ENST00000378026 ATG3Q9NT62 314 aa18.2■□□□□ 0.5
CKAP4-201ENST00000378026 NCAPD2Q15021 1401 aa18.2■□□□□ 0.5
CKAP4-201ENST00000378026 PRC1O43663 620 aa18.2■□□□□ 0.5
CKAP4-201ENST00000378026 SLC39A14Q15043 492 aa18.2■□□□□ 0.5
CKAP4-201ENST00000378026 PDIA6Q15084 440 aa18.2■□□□□ 0.5
CKAP4-201ENST00000378026 CHMP4CQ96CF2 233 aa18.2■□□□□ 0.5
CKAP4-201ENST00000378026 ABCB6Q9NP58 842 aa18.2■□□□□ 0.5
CKAP4-201ENST00000378026 NFE2L3Q9Y4A8 694 aa18.2■□□□□ 0.5
CKAP4-201ENST00000378026 MAST3O60307 1309 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms