RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 MRPS27Q92552 414 aaKnown RBP16.73■□□□□ 0.27
TCOF1-202ENST00000377797 ZSWIM6Q9HCJ5 1215 aa16.73■□□□□ 0.27
TCOF1-202ENST00000377797 RTL9Q8NET4 1388 aa16.73■□□□□ 0.27
TCOF1-202ENST00000377797 CTDSPL2Q05D32 466 aa16.72■□□□□ 0.27
TCOF1-202ENST00000377797 ZSCAN30Q86W11 494 aa16.72■□□□□ 0.27
TCOF1-202ENST00000377797 PPFIBP1Q86W92 1011 aa16.72■□□□□ 0.27
TCOF1-202ENST00000377797 ANTXR1Q9H6X2 564 aa16.72■□□□□ 0.27
TCOF1-202ENST00000377797 STK32BQ9NY57 414 aa16.72■□□□□ 0.27
TCOF1-202ENST00000377797 SYKP43405 635 aa16.72■□□□□ 0.27
TCOF1-202ENST00000377797 ADCK5Q3MIX3 580 aa16.72■□□□□ 0.27
TCOF1-202ENST00000377797 SLIT1O75093 1534 aa16.72■□□□□ 0.27
TCOF1-202ENST00000377797 SPTLC2O15270 562 aa16.72■□□□□ 0.27
TCOF1-202ENST00000377797 ISM2Q6H9L7 571 aa16.72■□□□□ 0.27
TCOF1-202ENST00000377797 SMARCE1Q969G3 411 aa16.72■□□□□ 0.27
TCOF1-202ENST00000377797 LLPHQ9BRT6 129 aaKnown RBP16.72■□□□□ 0.27
TCOF1-202ENST00000377797 ARHGAP23Q9P227 1491 aa16.72■□□□□ 0.27
TCOF1-202ENST00000377797 XRCC6P12956 609 aaKnown RBP eCLIP16.72■□□□□ 0.27
TCOF1-202ENST00000377797 JAK2O60674 1132 aa16.71■□□□□ 0.27
TCOF1-202ENST00000377797 SUSD4Q5VX71 490 aa16.71■□□□□ 0.27
TCOF1-202ENST00000377797 ZNF589Q86UQ0 364 aaPredicted RBP16.71■□□□□ 0.27
TCOF1-202ENST00000377797 FEZ1Q99689 392 aa16.71■□□□□ 0.27
TCOF1-202ENST00000377797 ITSN1Q15811 1721 aa16.71■□□□□ 0.27
TCOF1-202ENST00000377797 TRIM37O94972 964 aa16.71■□□□□ 0.27
TCOF1-202ENST00000377797 FGAP02671 866 aa16.71■□□□□ 0.27
TCOF1-202ENST00000377797 CEMIPQ8WUJ3 1361 aa16.71■□□□□ 0.27
TCOF1-202ENST00000377797 UBA7P41226 1012 aa16.71■□□□□ 0.27
TCOF1-202ENST00000377797 PI16Q6UXB8 463 aa16.71■□□□□ 0.27
TCOF1-202ENST00000377797 SYNE4Q8N205 404 aa16.71■□□□□ 0.27
TCOF1-202ENST00000377797 RAB34Q9BZG1 259 aa16.71■□□□□ 0.27
TCOF1-202ENST00000377797 MAP2P11137 1827 aaKnown RBP16.71■□□□□ 0.27
TCOF1-202ENST00000377797 COL3A1P02461 1466 aaPredicted RBP16.71■□□□□ 0.27
TCOF1-202ENST00000377797 STX1AQ16623 288 aa16.71■□□□□ 0.27
TCOF1-202ENST00000377797 HEATR3Q7Z4Q2 680 aa16.71■□□□□ 0.27
TCOF1-202ENST00000377797 SAP30BPQ9UHR5 308 aaKnown RBP16.71■□□□□ 0.27
TCOF1-202ENST00000377797 SOS2Q07890 1332 aaPredicted RBP16.71■□□□□ 0.26
TCOF1-202ENST00000377797 PATL2C9JE40 543 aaKnown RBP16.7■□□□□ 0.26
TCOF1-202ENST00000377797 CYP19A1P11511 503 aaPredicted RBP16.7■□□□□ 0.26
TCOF1-202ENST00000377797 ZMYM1Q5SVZ6 1142 aa16.7■□□□□ 0.26
TCOF1-202ENST00000377797 DPP8Q6V1X1 898 aaPredicted RBP16.7■□□□□ 0.26
TCOF1-202ENST00000377797 MYL10Q9BUA6 226 aa16.7■□□□□ 0.26
TCOF1-202ENST00000377797 ERFEQ4G0M1 354 aa16.7■□□□□ 0.26
TCOF1-202ENST00000377797 SEPT12Q8IYM1 358 aa16.7■□□□□ 0.26
TCOF1-202ENST00000377797 TCP11L1Q9NUJ3 509 aa16.7■□□□□ 0.26
TCOF1-202ENST00000377797 HDAC9Q9UKV0 1011 aa16.7■□□□□ 0.26
TCOF1-202ENST00000377797 MYO1BO43795 1136 aa16.69■□□□□ 0.26
TCOF1-202ENST00000377797 NAP1L1P55209 391 aaKnown RBP16.69■□□□□ 0.26
TCOF1-202ENST00000377797 OTUD7BQ6GQQ9 843 aa16.69■□□□□ 0.26
TCOF1-202ENST00000377797 BRAPQ7Z569 592 aa16.69■□□□□ 0.26
TCOF1-202ENST00000377797 UBE4AQ14139 1066 aa16.69■□□□□ 0.26
TCOF1-202ENST00000377797 TMEM266Q2M3C6 531 aa16.69■□□□□ 0.26
TCOF1-202ENST00000377797 TTC6Q86TZ1 520 aa16.69■□□□□ 0.26
TCOF1-202ENST00000377797 TPCN1Q9ULQ1 816 aa16.69■□□□□ 0.26
TCOF1-202ENST00000377797 BRD1O95696 1058 aa16.69■□□□□ 0.26
TCOF1-202ENST00000377797 MNS1Q8NEH6 495 aa16.69■□□□□ 0.26
TCOF1-202ENST00000377797 CCDC148Q8NFR7 591 aa16.69■□□□□ 0.26
TCOF1-202ENST00000377797 PDE4CQ08493 712 aa16.69■□□□□ 0.26
TCOF1-202ENST00000377797 AKNAD1Q5T1N1 836 aa16.69■□□□□ 0.26
TCOF1-202ENST00000377797 SRP68Q9UHB9 627 aaKnown RBP16.69■□□□□ 0.26
TCOF1-202ENST00000377797 TRIM75PA6NK02 468 aa16.68■□□□□ 0.26
TCOF1-202ENST00000377797 PKP1Q13835 747 aa16.68■□□□□ 0.26
TCOF1-202ENST00000377797 ADCY5O95622 1261 aa16.68■□□□□ 0.26
TCOF1-202ENST00000377797 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.68■□□□□ 0.26
TCOF1-202ENST00000377797 KCNQ2O43526 872 aa16.68■□□□□ 0.26
TCOF1-202ENST00000377797 CYP21A2P08686 494 aa16.68■□□□□ 0.26
TCOF1-202ENST00000377797 UBE3CQ15386 1083 aa16.68■□□□□ 0.26
TCOF1-202ENST00000377797 IFNL3Q8IZI9 196 aa16.68■□□□□ 0.26
TCOF1-202ENST00000377797 CUL5Q93034 780 aa16.68■□□□□ 0.26
TCOF1-202ENST00000377797 TANGO6Q9C0B7 1094 aa16.68■□□□□ 0.26
TCOF1-202ENST00000377797 CAVIN2O95810 425 aa16.67■□□□□ 0.26
TCOF1-202ENST00000377797 BMP15O95972 392 aa16.67■□□□□ 0.26
TCOF1-202ENST00000377797 H0YIN7 160 aa16.67■□□□□ 0.26
TCOF1-202ENST00000377797 NAPAP54920 295 aa16.67■□□□□ 0.26
TCOF1-202ENST00000377797 GTF3C6Q969F1 213 aa16.67■□□□□ 0.26
TCOF1-202ENST00000377797 ISCA1Q9BUE6 129 aa16.67■□□□□ 0.26
TCOF1-202ENST00000377797 USP17L12C9JPN9 530 aa16.67■□□□□ 0.26
TCOF1-202ENST00000377797 USP17L21D6R901 530 aa16.67■□□□□ 0.26
TCOF1-202ENST00000377797 CDC37L1Q7L3B6 337 aa16.67■□□□□ 0.26
TCOF1-202ENST00000377797 SDR42E1Q8WUS8 393 aa16.67■□□□□ 0.26
TCOF1-202ENST00000377797 ZNHIT6Q9NWK9 470 aaKnown RBP16.67■□□□□ 0.26
TCOF1-202ENST00000377797 MAST3O60307 1309 aa16.67■□□□□ 0.26
TCOF1-202ENST00000377797 SIGLEC1Q9BZZ2 1709 aa16.67■□□□□ 0.26
TCOF1-202ENST00000377797 MYO5BQ9ULV0 1848 aa16.67■□□□□ 0.26
TCOF1-202ENST00000377797 MSL1Q68DK7 614 aa16.66■□□□□ 0.26
TCOF1-202ENST00000377797 KRT27Q7Z3Y8 459 aa16.66■□□□□ 0.26
TCOF1-202ENST00000377797 CALML3P27482 149 aa16.66■□□□□ 0.26
TCOF1-202ENST00000377797 PHKBQ93100 1093 aa16.66■□□□□ 0.26
TCOF1-202ENST00000377797 UVSSAQ2YD98 709 aa16.66■□□□□ 0.26
TCOF1-202ENST00000377797 ANO6Q4KMQ2 910 aa16.66■□□□□ 0.26
TCOF1-202ENST00000377797 VEZTQ9HBM0 779 aa16.66■□□□□ 0.26
TCOF1-202ENST00000377797 CLIP2Q9UDT6 1046 aa16.66■□□□□ 0.26
TCOF1-202ENST00000377797 SFPQP23246 707 aaKnown RBP eCLIP16.65■□□□□ 0.26
TCOF1-202ENST00000377797 KANK3Q6NY19 840 aa16.65■□□□□ 0.26
TCOF1-202ENST00000377797 CLEC4GQ6UXB4 293 aa16.65■□□□□ 0.26
TCOF1-202ENST00000377797 ZNF804BA4D1E1 1349 aa16.65■□□□□ 0.26
TCOF1-202ENST00000377797 CCP110O43303 1012 aa16.65■□□□□ 0.26
TCOF1-202ENST00000377797 FAM200AQ8TCP9 573 aa16.65■□□□□ 0.26
TCOF1-202ENST00000377797 PPP4R3BQ5MIZ7 849 aa16.65■□□□□ 0.26
TCOF1-202ENST00000377797 MFSD14BQ5SR56 506 aa16.65■□□□□ 0.26
TCOF1-202ENST00000377797 MAPKAPK5Q8IW41 473 aa16.65■□□□□ 0.26
TCOF1-202ENST00000377797 RGS12O14924 1447 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms