RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 NAP1L4Q99733 375 aaKnown RBP21.41■■□□□ 1.02
TBC1D4-201ENST00000377625 ZBTB16Q05516 673 aa21.41■■□□□ 1.02
TBC1D4-201ENST00000377625 RAPGEF1Q13905 1077 aa21.41■■□□□ 1.02
TBC1D4-201ENST00000377625 LAMC3Q9Y6N6 1575 aa21.41■■□□□ 1.02
TBC1D4-201ENST00000377625 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.41■■□□□ 1.02
TBC1D4-201ENST00000377625 DDX23Q9BUQ8 820 aaKnown RBP21.41■■□□□ 1.02
TBC1D4-201ENST00000377625 RSPH14Q9UHP6 348 aa21.41■■□□□ 1.02
TBC1D4-201ENST00000377625 DENND2AQ9ULE3 1009 aa21.41■■□□□ 1.02
TBC1D4-201ENST00000377625 VWA3AA6NCI4 1184 aa21.41■■□□□ 1.02
TBC1D4-201ENST00000377625 HELLSQ9NRZ9 838 aa21.41■■□□□ 1.02
TBC1D4-201ENST00000377625 PPP1R9BQ96SB3 815 aa21.4■■□□□ 1.02
TBC1D4-201ENST00000377625 POLR3AO14802 1390 aaPredicted RBP21.4■■□□□ 1.02
TBC1D4-201ENST00000377625 SV2BQ7L1I2 683 aa21.4■■□□□ 1.02
TBC1D4-201ENST00000377625 RBM17Q96I25 401 aaKnown RBP21.4■■□□□ 1.02
TBC1D4-201ENST00000377625 TXNDC16Q9P2K2 825 aa21.4■■□□□ 1.02
TBC1D4-201ENST00000377625 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.4■■□□□ 1.027e-6■■□□□ 11.8
TBC1D4-201ENST00000377625 SAP30BPQ9UHR5 308 aaKnown RBP21.4■■□□□ 1.02
TBC1D4-201ENST00000377625 V9GYY5 206 aaPredicted RBP21.4■■□□□ 1.02
TBC1D4-201ENST00000377625 LETM2Q2VYF4 491 aa21.4■■□□□ 1.02
TBC1D4-201ENST00000377625 APBB1IPQ7Z5R6 666 aaPredicted RBP21.4■■□□□ 1.02
TBC1D4-201ENST00000377625 CCDC65Q8IXS2 484 aa21.4■■□□□ 1.02
TBC1D4-201ENST00000377625 EYA1Q99502 592 aa21.4■■□□□ 1.02
TBC1D4-201ENST00000377625 PCDH11XQ9BZA7 1347 aa21.4■■□□□ 1.02
TBC1D4-201ENST00000377625 PCDH11YQ9BZA8 1340 aa21.4■■□□□ 1.02
TBC1D4-201ENST00000377625 RNMTO43148 476 aaKnown RBP21.4■■□□□ 1.02
TBC1D4-201ENST00000377625 ZNF174Q15697 407 aa21.4■■□□□ 1.02
TBC1D4-201ENST00000377625 MNAT1P51948 309 aa21.4■■□□□ 1.02
TBC1D4-201ENST00000377625 PLEKHM2Q8IWE5 1019 aa21.4■■□□□ 1.02
TBC1D4-201ENST00000377625 ANKS4BQ8N8V4 417 aa21.4■■□□□ 1.02
TBC1D4-201ENST00000377625 SMC6Q96SB8 1091 aa21.4■■□□□ 1.02
TBC1D4-201ENST00000377625 PKD2L1Q9P0L9 805 aa21.4■■□□□ 1.02
TBC1D4-201ENST00000377625 SMIM23A6NLE4 172 aa21.39■■□□□ 1.02
TBC1D4-201ENST00000377625 XRCC6P12956 609 aaKnown RBP eCLIP21.39■■□□□ 1.02
TBC1D4-201ENST00000377625 IFT81Q8WYA0 676 aa21.39■■□□□ 1.02
TBC1D4-201ENST00000377625 PPP1R7Q15435 360 aa21.39■■□□□ 1.01
TBC1D4-201ENST00000377625 TEX11Q8IYF3 940 aa21.39■■□□□ 1.01
TBC1D4-201ENST00000377625 ZKSCAN5Q9Y2L8 839 aa21.39■■□□□ 1.01
TBC1D4-201ENST00000377625 GCP02774 474 aa21.39■■□□□ 1.01
TBC1D4-201ENST00000377625 SH2D4AQ9H788 454 aa21.39■■□□□ 1.01
TBC1D4-201ENST00000377625 URB2Q14146 1524 aaKnown RBP21.39■■□□□ 1.01
TBC1D4-201ENST00000377625 RAB3GAP1Q15042 981 aa21.38■■□□□ 1.01
TBC1D4-201ENST00000377625 FRMD4BQ9Y2L6 1034 aa21.38■■□□□ 1.01
TBC1D4-201ENST00000377625 TAF12Q16514 161 aa21.38■■□□□ 1.01
TBC1D4-201ENST00000377625 IVLP07476 585 aa21.38■■□□□ 1.01
TBC1D4-201ENST00000377625 ATP2A2P16615 1042 aaKnown RBP21.38■■□□□ 1.01
TBC1D4-201ENST00000377625 C8orf34Q49A92 452 aa21.38■■□□□ 1.01
TBC1D4-201ENST00000377625 INTS4Q96HW7 963 aaKnown RBP21.38■■□□□ 1.01
TBC1D4-201ENST00000377625 GNPATO15228 680 aa21.38■■□□□ 1.01
TBC1D4-201ENST00000377625 CCDC25Q86WR0 208 aa21.38■■□□□ 1.01
TBC1D4-201ENST00000377625 KIAA1524Q8TCG1 905 aa21.38■■□□□ 1.01
TBC1D4-201ENST00000377625 MTRF1LQ9UGC7 380 aaKnown RBP21.38■■□□□ 1.01
TBC1D4-201ENST00000377625 NPATQ14207 1427 aa21.37■■□□□ 1.01
TBC1D4-201ENST00000377625 TRAPPC3LQ5T215 181 aa21.37■■□□□ 1.01
TBC1D4-201ENST00000377625 MSL1Q68DK7 614 aa21.37■■□□□ 1.01
TBC1D4-201ENST00000377625 GPCPD1Q9NPB8 672 aa21.37■■□□□ 1.01
TBC1D4-201ENST00000377625 ELP1O95163 1332 aa21.37■■□□□ 1.01
TBC1D4-201ENST00000377625 RLBP1P12271 317 aa21.37■■□□□ 1.01
TBC1D4-201ENST00000377625 CCDC114Q96M63 670 aa21.37■■□□□ 1.01
TBC1D4-201ENST00000377625 C19orf44Q9H6X5 657 aa21.37■■□□□ 1.01
TBC1D4-201ENST00000377625 FAM169AQ9Y6X4 670 aa21.37■■□□□ 1.01
TBC1D4-201ENST00000377625 TRAF5O00463 557 aa21.37■■□□□ 1.01
TBC1D4-201ENST00000377625 CNGA4Q8IV77 575 aa21.37■■□□□ 1.01
TBC1D4-201ENST00000377625 PLCD3Q8N3E9 789 aa21.37■■□□□ 1.01
TBC1D4-201ENST00000377625 ZBTB40Q9NUA8 1239 aa21.37■■□□□ 1.01
TBC1D4-201ENST00000377625 MTUS1Q9ULD2 1270 aa21.37■■□□□ 1.01
TBC1D4-201ENST00000377625 TLDC2A0PJX2 215 aa21.36■■□□□ 1.01
TBC1D4-201ENST00000377625 VAV2P52735 878 aa21.36■■□□□ 1.01
TBC1D4-201ENST00000377625 TNNC1P63316 161 aa21.36■■□□□ 1.01
TBC1D4-201ENST00000377625 TUBB4BP68371 445 aa21.36■■□□□ 1.01
TBC1D4-201ENST00000377625 PHACTR3Q96KR7 559 aa21.36■■□□□ 1.01
TBC1D4-201ENST00000377625 A0A1B0GVL5 298 aa21.36■■□□□ 1.01
TBC1D4-201ENST00000377625 FMNL3Q8IVF7 1028 aa21.36■■□□□ 1.01
TBC1D4-201ENST00000377625 ZHX1Q9UKY1 873 aaPredicted RBP21.36■■□□□ 1.01
TBC1D4-201ENST00000377625 RHOXF2BP0C7M4 288 aa21.36■■□□□ 1.01
TBC1D4-201ENST00000377625 PLCD1P51178 756 aa21.36■■□□□ 1.01
TBC1D4-201ENST00000377625 BIRC3Q13489 604 aa21.36■■□□□ 1.01
TBC1D4-201ENST00000377625 RHOXF2Q9BQY4 288 aa21.36■■□□□ 1.01
TBC1D4-201ENST00000377625 GPATCH8Q9UKJ3 1502 aaKnown RBP21.36■■□□□ 1.01
TBC1D4-201ENST00000377625 EPB41P11171 864 aaKnown RBP21.36■■□□□ 1.01
TBC1D4-201ENST00000377625 PSMC4P43686 418 aa21.36■■□□□ 1.01
TBC1D4-201ENST00000377625 NBPF14Q5TI25 921 aa21.36■■□□□ 1.01
TBC1D4-201ENST00000377625 ATL3Q6DD88 541 aa21.36■■□□□ 1.01
TBC1D4-201ENST00000377625 SMC5Q8IY18 1101 aa21.36■■□□□ 1.01
TBC1D4-201ENST00000377625 FAM89AQ96GI7 184 aa21.36■■□□□ 1.01
TBC1D4-201ENST00000377625 HOXC9P31274 260 aa21.35■■□□□ 1.01
TBC1D4-201ENST00000377625 CALCOCO2Q13137 446 aa21.35■■□□□ 1.01
TBC1D4-201ENST00000377625 SYT10Q6XYQ8 523 aa21.35■■□□□ 1.01
TBC1D4-201ENST00000377625 GPATCH11Q8N954 259 aa21.35■■□□□ 1.01
TBC1D4-201ENST00000377625 MAK16Q9BXY0 300 aaKnown RBP21.35■■□□□ 1.01
TBC1D4-201ENST00000377625 DDX21Q9NR30 783 aaKnown RBP eCLIP21.35■■□□□ 1.01
TBC1D4-201ENST00000377625 B4E1Z4 1266 aa21.35■■□□□ 1.01
TBC1D4-201ENST00000377625 KRT5P13647 590 aa21.35■■□□□ 1.01
TBC1D4-201ENST00000377625 CCT6AP40227 531 aaKnown RBP21.35■■□□□ 1.01
TBC1D4-201ENST00000377625 FNBP1Q96RU3 617 aa21.35■■□□□ 1.01
TBC1D4-201ENST00000377625 TSGA10Q9BZW7 698 aa21.35■■□□□ 1.01
TBC1D4-201ENST00000377625 MYL5Q02045 173 aa21.35■■□□□ 1.01
TBC1D4-201ENST00000377625 NUP160Q12769 1436 aa21.35■■□□□ 1.01
TBC1D4-201ENST00000377625 HARSP12081 509 aaKnown RBP21.35■■□□□ 1.01
TBC1D4-201ENST00000377625 WDR44Q5JSH3 913 aa21.35■■□□□ 1.01
TBC1D4-201ENST00000377625 CNBD1Q8NA66 436 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms