RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 ZSCAN16Q9H4T2 348 aaPredicted RBP16.39■□□□□ 0.21
MSH5-202ENST00000375740 DDX60Q8IY21 1712 aaKnown RBP16.39■□□□□ 0.21
MSH5-202ENST00000375740 TOM1O60784 492 aa16.38■□□□□ 0.21
MSH5-202ENST00000375740 TCRBV5S4A2TA0A5A2 114 aa16.38■□□□□ 0.21
MSH5-202ENST00000375740 GTF2E1P29083 439 aaPredicted RBP16.38■□□□□ 0.21
MSH5-202ENST00000375740 APPP05067 770 aa16.37■□□□□ 0.21
MSH5-202ENST00000375740 LIG1P18858 919 aa16.37■□□□□ 0.21
MSH5-202ENST00000375740 IGHMBP2P38935 993 aaKnown RBP16.37■□□□□ 0.21
MSH5-202ENST00000375740 ANTXR2P58335 489 aa16.37■□□□□ 0.21
MSH5-202ENST00000375740 NAA16Q6N069 864 aaPredicted RBP16.37■□□□□ 0.21
MSH5-202ENST00000375740 ATRNO75882 1429 aa16.37■□□□□ 0.21
MSH5-202ENST00000375740 KIF20AO95235 890 aa16.37■□□□□ 0.21
MSH5-202ENST00000375740 KCNQ4P56696 695 aa16.37■□□□□ 0.21
MSH5-202ENST00000375740 RASGRF1Q13972 1273 aa16.37■□□□□ 0.21
MSH5-202ENST00000375740 RALYLQ86SE5 291 aaKnown RBP16.37■□□□□ 0.21
MSH5-202ENST00000375740 NBPF3Q9H094 633 aa16.37■□□□□ 0.21
MSH5-202ENST00000375740 SALL1Q9NSC2 1324 aa16.36■□□□□ 0.21
MSH5-202ENST00000375740 ARAP2Q8WZ64 1704 aa16.36■□□□□ 0.21
MSH5-202ENST00000375740 GOLGA6L4A6NEF3 574 aa16.36■□□□□ 0.21
MSH5-202ENST00000375740 ADCY5O95622 1261 aa16.36■□□□□ 0.21
MSH5-202ENST00000375740 LINC00116Q8NCU8 138 aa16.36■□□□□ 0.21
MSH5-202ENST00000375740 FUCA2Q9BTY2 467 aa16.36■□□□□ 0.21
MSH5-202ENST00000375740 ZNF652Q9Y2D9 606 aa16.36■□□□□ 0.21
MSH5-202ENST00000375740 CICQ96RK0 1608 aaPredicted RBP16.36■□□□□ 0.21
MSH5-202ENST00000375740 CHMP4CQ96CF2 233 aa16.36■□□□□ 0.21
MSH5-202ENST00000375740 STRBPQ96SI9 672 aaKnown RBP16.36■□□□□ 0.21
MSH5-202ENST00000375740 KLF18A0A0U1RQI7 1052 aa16.35■□□□□ 0.21
MSH5-202ENST00000375740 FDPSP14324 419 aaKnown RBP16.35■□□□□ 0.21
MSH5-202ENST00000375740 BCAMP50895 628 aa16.35■□□□□ 0.21
MSH5-202ENST00000375740 UVSSAQ2YD98 709 aa16.35■□□□□ 0.21
MSH5-202ENST00000375740 PDCL2Q8N4E4 241 aa16.35■□□□□ 0.21
MSH5-202ENST00000375740 PGBD1Q96JS3 809 aa16.35■□□□□ 0.21
MSH5-202ENST00000375740 DENND2AQ9ULE3 1009 aa16.35■□□□□ 0.21
MSH5-202ENST00000375740 MAGEB6Q8N7X4 407 aa16.35■□□□□ 0.21
MSH5-202ENST00000375740 NGLY1Q96IV0 654 aa16.35■□□□□ 0.21
MSH5-202ENST00000375740 CFAP45Q9UL16 551 aa16.35■□□□□ 0.21
MSH5-202ENST00000375740 RTL9Q8NET4 1388 aa16.35■□□□□ 0.21
MSH5-202ENST00000375740 ADD1P35611 737 aaKnown RBP16.34■□□□□ 0.21
MSH5-202ENST00000375740 GUCY1B3Q02153 619 aa16.34■□□□□ 0.21
MSH5-202ENST00000375740 CHRNDQ07001 517 aa16.34■□□□□ 0.21
MSH5-202ENST00000375740 MAP3K12Q12852 859 aa16.34■□□□□ 0.21
MSH5-202ENST00000375740 CLEC4GQ6UXB4 293 aa16.34■□□□□ 0.21
MSH5-202ENST00000375740 TBC1D10CQ8IV04 446 aa16.34■□□□□ 0.21
MSH5-202ENST00000375740 NKX2-3Q8TAU0 364 aa16.34■□□□□ 0.21
MSH5-202ENST00000375740 AIDAQ96BJ3 306 aa16.34■□□□□ 0.21
MSH5-202ENST00000375740 C8orf37Q96NL8 207 aa16.34■□□□□ 0.21
MSH5-202ENST00000375740 HPS5Q9UPZ3 1129 aa16.34■□□□□ 0.21
MSH5-202ENST00000375740 TRDNQ13061 729 aa16.34■□□□□ 0.21
MSH5-202ENST00000375740 ERFEQ4G0M1 354 aa16.34■□□□□ 0.21
MSH5-202ENST00000375740 RAB11FIP4Q86YS3 637 aa16.34■□□□□ 0.21
MSH5-202ENST00000375740 KLHL34Q8N239 644 aa16.34■□□□□ 0.21
MSH5-202ENST00000375740 COL5A3P25940 1745 aaPredicted RBP16.34■□□□□ 0.21
MSH5-202ENST00000375740 RIOK3O14730 519 aaKnown RBP16.33■□□□□ 0.21
MSH5-202ENST00000375740 CEBPZQ03701 1054 aaKnown RBP16.33■□□□□ 0.21
MSH5-202ENST00000375740 CAMK4Q16566 473 aa16.33■□□□□ 0.21
MSH5-202ENST00000375740 SMIM5Q71RC9 77 aa16.33■□□□□ 0.21
MSH5-202ENST00000375740 PTF1AQ7RTS3 328 aa16.33■□□□□ 0.21
MSH5-202ENST00000375740 DACT1Q9NYF0 836 aa16.33■□□□□ 0.21
MSH5-202ENST00000375740 WDR19Q8NEZ3 1342 aa16.33■□□□□ 0.21
MSH5-202ENST00000375740 CARMIL3Q8ND23 1372 aa16.33■□□□□ 0.2
MSH5-202ENST00000375740 GOLGA8BA8MQT2 603 aa16.33■□□□□ 0.2
MSH5-202ENST00000375740 ZBTB22O15209 634 aa16.33■□□□□ 0.2
MSH5-202ENST00000375740 PLCB2Q00722 1185 aa16.33■□□□□ 0.2
MSH5-202ENST00000375740 CYB5R4Q7L1T6 521 aa16.33■□□□□ 0.2
MSH5-202ENST00000375740 NUP62CLQ9H1M0 184 aa16.33■□□□□ 0.2
MSH5-202ENST00000375740 SPTLC3Q9NUV7 552 aa16.33■□□□□ 0.2
MSH5-202ENST00000375740 PATL2C9JE40 543 aaKnown RBP16.32■□□□□ 0.2
MSH5-202ENST00000375740 VPS72Q15906 364 aa16.32■□□□□ 0.2
MSH5-202ENST00000375740 C3orf67Q6ZVT6 689 aa16.32■□□□□ 0.2
MSH5-202ENST00000375740 PYCARDQ9ULZ3 195 aa16.32■□□□□ 0.2
MSH5-202ENST00000375740 LAMB2P55268 1798 aa16.32■□□□□ 0.2
MSH5-202ENST00000375740 COL4A1P02462 1669 aa16.32■□□□□ 0.2
MSH5-202ENST00000375740 AP5Z1O43299 807 aa16.32■□□□□ 0.2
MSH5-202ENST00000375740 MBD4O95243 580 aa16.32■□□□□ 0.2
MSH5-202ENST00000375740 ALX1Q15699 326 aa16.32■□□□□ 0.2
MSH5-202ENST00000375740 BICDL1Q6ZP65 573 aa16.32■□□□□ 0.2
MSH5-202ENST00000375740 IFNL3Q8IZI9 196 aa16.32■□□□□ 0.2
MSH5-202ENST00000375740 CDC5LQ99459 802 aaKnown RBP16.32■□□□□ 0.2
MSH5-202ENST00000375740 ARMT1Q9H993 441 aa16.32■□□□□ 0.2
MSH5-202ENST00000375740 BCL9LQ86UU0 1499 aa16.31■□□□□ 0.2
MSH5-202ENST00000375740 BCORQ6W2J9 1755 aa16.31■□□□□ 0.2
MSH5-202ENST00000375740 DHX16O60231 1041 aaKnown RBP16.31■□□□□ 0.2
MSH5-202ENST00000375740 MAP3K11Q16584 847 aa16.31■□□□□ 0.2
MSH5-202ENST00000375740 BICD2Q8TD16 824 aa16.31■□□□□ 0.2
MSH5-202ENST00000375740 FTOQ9C0B1 505 aaKnown RBP eCLIP16.31■□□□□ 0.2
MSH5-202ENST00000375740 INCENPQ9NQS7 918 aa16.31■□□□□ 0.2
MSH5-202ENST00000375740 MYH15Q9Y2K3 1946 aa16.31■□□□□ 0.2
MSH5-202ENST00000375740 DOCK2Q92608 1830 aa16.31■□□□□ 0.2
MSH5-202ENST00000375740 B4E1Z4 1266 aa16.31■□□□□ 0.2
MSH5-202ENST00000375740 KCNF1Q9H3M0 494 aa16.31■□□□□ 0.2
MSH5-202ENST00000375740 RCOR1Q9UKL0 485 aa16.31■□□□□ 0.2
MSH5-202ENST00000375740 NR1I2O75469 434 aa16.3■□□□□ 0.2
MSH5-202ENST00000375740 CCDC192P0DO97 292 aa16.3■□□□□ 0.2
MSH5-202ENST00000375740 OTUD7BQ6GQQ9 843 aa16.3■□□□□ 0.2
MSH5-202ENST00000375740 ANKRD18AQ8IVF6 992 aa16.3■□□□□ 0.2
MSH5-202ENST00000375740 TNMDQ9H2S6 317 aa16.3■□□□□ 0.2
MSH5-202ENST00000375740 EPB41L4AQ9HCS5 686 aaPredicted RBP16.3■□□□□ 0.2
MSH5-202ENST00000375740 TMEM51Q9NW97 253 aa16.3■□□□□ 0.2
MSH5-202ENST00000375740 ANGEL1Q9UNK9 670 aaKnown RBP16.3■□□□□ 0.2
MSH5-202ENST00000375740 WTIPA6NIX2 430 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms