RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 ARMCX5Q6P1M9 558 aa16.42■□□□□ 0.22
CLCNKA-202ENST00000375692 TMC6Q7Z403 805 aa16.42■□□□□ 0.22
CLCNKA-202ENST00000375692 AGXT2Q9BYV1 514 aa16.42■□□□□ 0.22
CLCNKA-202ENST00000375692 SH3TC1Q8TE82 1336 aa16.42■□□□□ 0.22
CLCNKA-202ENST00000375692 BCL9O00512 1426 aa16.42■□□□□ 0.22
CLCNKA-202ENST00000375692 SLU7O95391 586 aaKnown RBP16.42■□□□□ 0.22
CLCNKA-202ENST00000375692 GABPB1Q06547 395 aaPredicted RBP16.42■□□□□ 0.22
CLCNKA-202ENST00000375692 ST7Q9NRC1 585 aa16.42■□□□□ 0.22
CLCNKA-202ENST00000375692 CARMIL3Q8ND23 1372 aa16.42■□□□□ 0.22
CLCNKA-202ENST00000375692 GLI3P10071 1580 aa16.41■□□□□ 0.22
CLCNKA-202ENST00000375692 SF3A1Q15459 793 aaKnown RBP16.41■□□□□ 0.22
CLCNKA-202ENST00000375692 LAMA4Q16363 1823 aa16.41■□□□□ 0.22
CLCNKA-202ENST00000375692 KIAA1468Q9P260 1216 aa16.41■□□□□ 0.22
CLCNKA-202ENST00000375692 GSDMDP57764 484 aa16.41■□□□□ 0.22
CLCNKA-202ENST00000375692 ATL3Q6DD88 541 aa16.41■□□□□ 0.22
CLCNKA-202ENST00000375692 ADALQ6DHV7 355 aa16.41■□□□□ 0.22
CLCNKA-202ENST00000375692 SYT10Q6XYQ8 523 aa16.41■□□□□ 0.22
CLCNKA-202ENST00000375692 KRT222Q8N1A0 295 aa16.41■□□□□ 0.22
CLCNKA-202ENST00000375692 LINC00301Q8NCQ3 95 aa16.41■□□□□ 0.22
CLCNKA-202ENST00000375692 GJD4Q96KN9 370 aaPredicted RBP16.41■□□□□ 0.22
CLCNKA-202ENST00000375692 PPP1R13BQ96KQ4 1090 aa16.41■□□□□ 0.22
CLCNKA-202ENST00000375692 DSCC1Q9BVC3 393 aa16.41■□□□□ 0.22
CLCNKA-202ENST00000375692 OSBPL5Q9H0X9 879 aaPredicted RBP16.41■□□□□ 0.22
CLCNKA-202ENST00000375692 ZNF446Q9NWS9 450 aa16.41■□□□□ 0.22
CLCNKA-202ENST00000375692 RTEL1Q9NZ71 1219 aa16.41■□□□□ 0.22
CLCNKA-202ENST00000375692 RFX7Q2KHR2 1363 aa16.4■□□□□ 0.22
CLCNKA-202ENST00000375692 STK38Q15208 465 aa16.4■□□□□ 0.22
CLCNKA-202ENST00000375692 ERCC6LQ2NKX8 1250 aa16.4■□□□□ 0.22
CLCNKA-202ENST00000375692 HELLSQ9NRZ9 838 aa16.4■□□□□ 0.22
CLCNKA-202ENST00000375692 ZNF330Q9Y3S2 320 aaPredicted RBP16.4■□□□□ 0.22
CLCNKA-202ENST00000375692 HAND2P61296 217 aa16.4■□□□□ 0.22
CLCNKA-202ENST00000375692 TERF2Q15554 542 aa16.4■□□□□ 0.22
CLCNKA-202ENST00000375692 ZMYM1Q5SVZ6 1142 aa16.4■□□□□ 0.22
CLCNKA-202ENST00000375692 ZNF274Q96GC6 653 aaPredicted RBP16.4■□□□□ 0.22
CLCNKA-202ENST00000375692 TAOK2Q9UL54 1235 aa16.4■□□□□ 0.22
CLCNKA-202ENST00000375692 MYH15Q9Y2K3 1946 aa16.4■□□□□ 0.22
CLCNKA-202ENST00000375692 MAST3O60307 1309 aa16.4■□□□□ 0.22
CLCNKA-202ENST00000375692 ZRSR1Q15695 479 aaKnown RBP16.39■□□□□ 0.22
CLCNKA-202ENST00000375692 TTLL7Q6ZT98 887 aa16.39■□□□□ 0.22
CLCNKA-202ENST00000375692 ATG9AQ7Z3C6 839 aa16.39■□□□□ 0.22
CLCNKA-202ENST00000375692 ITGB4P16144 1822 aa16.39■□□□□ 0.21
CLCNKA-202ENST00000375692 NEDD4P46934 1319 aa16.39■□□□□ 0.21
CLCNKA-202ENST00000375692 M0R2C6 588 aa16.39■□□□□ 0.21
CLCNKA-202ENST00000375692 WNK3Q9BYP7 1800 aa16.39■□□□□ 0.21
CLCNKA-202ENST00000375692 CASP7P55210 303 aa16.38■□□□□ 0.21
CLCNKA-202ENST00000375692 ZNF594Q96JF6 807 aaPredicted RBP16.38■□□□□ 0.21
CLCNKA-202ENST00000375692 KCND1Q9NSA2 647 aa16.38■□□□□ 0.21
CLCNKA-202ENST00000375692 LMOD1P29536 600 aaPredicted RBP16.38■□□□□ 0.21
CLCNKA-202ENST00000375692 KCNQ4P56696 695 aa16.38■□□□□ 0.21
CLCNKA-202ENST00000375692 IMPACTQ9P2X3 320 aa16.38■□□□□ 0.21
CLCNKA-202ENST00000375692 A0A1W2PQ27 194 aa16.37■□□□□ 0.21
CLCNKA-202ENST00000375692 A0A1W2PQ64 194 aa16.37■□□□□ 0.21
CLCNKA-202ENST00000375692 A0A1W2PQD8 194 aa16.37■□□□□ 0.21
CLCNKA-202ENST00000375692 SLC3A2P08195 630 aaKnown RBP16.37■□□□□ 0.21
CLCNKA-202ENST00000375692 SFPQP23246 707 aaKnown RBP eCLIP16.37■□□□□ 0.21
CLCNKA-202ENST00000375692 FOXO4P98177 505 aa16.37■□□□□ 0.21
CLCNKA-202ENST00000375692 LRRC24Q50LG9 513 aa16.37■□□□□ 0.21
CLCNKA-202ENST00000375692 C8orf76Q96K31 380 aa16.37■□□□□ 0.21
CLCNKA-202ENST00000375692 QTRT2Q9H974 415 aaKnown RBP16.37■□□□□ 0.21
CLCNKA-202ENST00000375692 FAM53CQ9NYF3 392 aa16.37■□□□□ 0.21
CLCNKA-202ENST00000375692 PALLDQ8WX93 1383 aa16.37■□□□□ 0.21
CLCNKA-202ENST00000375692 SPTLC2O15270 562 aa16.37■□□□□ 0.21
CLCNKA-202ENST00000375692 ZNF202O95125 648 aa16.37■□□□□ 0.21
CLCNKA-202ENST00000375692 NCAPHQ15003 741 aa16.37■□□□□ 0.21
CLCNKA-202ENST00000375692 PTPN21Q16825 1174 aa16.37■□□□□ 0.21
CLCNKA-202ENST00000375692 GORABQ5T7V8 394 aa16.37■□□□□ 0.21
CLCNKA-202ENST00000375692 OSBP2Q969R2 916 aa16.37■□□□□ 0.21
CLCNKA-202ENST00000375692 KIF28PB7ZC32 967 aa16.36■□□□□ 0.21
CLCNKA-202ENST00000375692 RNF113AO15541 343 aaKnown RBP16.36■□□□□ 0.21
CLCNKA-202ENST00000375692 IFIT1P09914 478 aaKnown RBP16.36■□□□□ 0.21
CLCNKA-202ENST00000375692 ATP1A3P13637 1013 aa16.36■□□□□ 0.21
CLCNKA-202ENST00000375692 UBR2Q8IWV8 1755 aa16.36■□□□□ 0.21
CLCNKA-202ENST00000375692 L2HGDHQ9H9P8 463 aa16.36■□□□□ 0.21
CLCNKA-202ENST00000375692 ORC3Q9UBD5 711 aaPredicted RBP16.36■□□□□ 0.21
CLCNKA-202ENST00000375692 KIF2AO00139 706 aaPredicted RBP16.35■□□□□ 0.21
CLCNKA-202ENST00000375692 MARCKSP29966 332 aaPredicted RBP16.35■□□□□ 0.21
CLCNKA-202ENST00000375692 FKBP4Q02790 459 aaKnown RBP eCLIP16.35■□□□□ 0.21
CLCNKA-202ENST00000375692 HSP90AB3PQ58FF7 597 aa16.35■□□□□ 0.21
CLCNKA-202ENST00000375692 MYSM1Q5VVJ2 828 aa16.35■□□□□ 0.21
CLCNKA-202ENST00000375692 CCDC150Q8NCX0 1101 aa16.35■□□□□ 0.21
CLCNKA-202ENST00000375692 ZBTB3Q9H5J0 574 aa16.35■□□□□ 0.21
CLCNKA-202ENST00000375692 KLF18A0A0U1RQI7 1052 aa16.35■□□□□ 0.21
CLCNKA-202ENST00000375692 NLRP12P59046 1061 aa16.35■□□□□ 0.21
CLCNKA-202ENST00000375692 GOLGA8FQ08AF8 430 aa16.35■□□□□ 0.21
CLCNKA-202ENST00000375692 GOLGA8DPQ0D2H9 430 aa16.35■□□□□ 0.21
CLCNKA-202ENST00000375692 CCDC93Q567U6 631 aa16.35■□□□□ 0.21
CLCNKA-202ENST00000375692 HOMER1Q86YM7 354 aa16.35■□□□□ 0.21
CLCNKA-202ENST00000375692 FBXO18Q8NFZ0 1043 aa16.35■□□□□ 0.21
CLCNKA-202ENST00000375692 KCNG4Q8TDN1 519 aa16.35■□□□□ 0.21
CLCNKA-202ENST00000375692 DOT1LQ8TEK3 1739 aa16.35■□□□□ 0.21
CLCNKA-202ENST00000375692 PAPPAQ13219 1627 aa16.35■□□□□ 0.21
CLCNKA-202ENST00000375692 WDHD1O75717 1129 aaPredicted RBP16.34■□□□□ 0.21
CLCNKA-202ENST00000375692 PFKFB1P16118 471 aa16.34■□□□□ 0.21
CLCNKA-202ENST00000375692 FANCCQ00597 558 aa16.34■□□□□ 0.21
CLCNKA-202ENST00000375692 BPIFA3Q9BQP9 254 aa16.34■□□□□ 0.21
CLCNKA-202ENST00000375692 PUS3Q9BZE2 481 aaKnown RBP16.34■□□□□ 0.21
CLCNKA-202ENST00000375692 HPS5Q9UPZ3 1129 aa16.34■□□□□ 0.21
CLCNKA-202ENST00000375692 A0A0U1RQG5 324 aaPredicted RBP16.34■□□□□ 0.21
CLCNKA-202ENST00000375692 GOLGA8BA8MQT2 603 aa16.34■□□□□ 0.21
CLCNKA-202ENST00000375692 FOXP2O15409 715 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms