RNA–Protein interactions for RNA: ENST00000375025.10

CCDC7-204, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 2,729 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-204ENST00000375025 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.21□□□□□ -1.9
CCDC7-204ENST00000375025 GJA3Q9Y6H8 435 aa3.21□□□□□ -1.9
CCDC7-204ENST00000375025 NALCNQ8IZF0 1738 aa3.21□□□□□ -1.9
CCDC7-204ENST00000375025 ADAMTS7Q9UKP4 1686 aa3.21□□□□□ -1.9
CCDC7-204ENST00000375025 PEAK1Q9H792 1746 aa3.21□□□□□ -1.9
CCDC7-204ENST00000375025 TYRO3Q06418 890 aa3.21□□□□□ -1.9
CCDC7-204ENST00000375025 WASHC4Q2M389 1173 aa3.21□□□□□ -1.9
CCDC7-204ENST00000375025 ZNF326Q5BKZ1 582 aaKnown RBP3.21□□□□□ -1.9
CCDC7-204ENST00000375025 STAG2Q8N3U4 1231 aa3.21□□□□□ -1.9
CCDC7-204ENST00000375025 PAPPAQ13219 1627 aa3.2□□□□□ -1.9
CCDC7-204ENST00000375025 BRD4O60885 1362 aaPredicted RBP3.2□□□□□ -1.9
CCDC7-204ENST00000375025 DHX57Q6P158 1386 aaKnown RBP3.2□□□□□ -1.9
CCDC7-204ENST00000375025 CDC42BPGQ6DT37 1551 aa3.2□□□□□ -1.9
CCDC7-204ENST00000375025 RBM47A0AV96 593 aaKnown RBP3.2□□□□□ -1.9
CCDC7-204ENST00000375025 PLSCR1O15162 318 aa3.2□□□□□ -1.9
CCDC7-204ENST00000375025 LILRB5O75023 590 aa3.2□□□□□ -1.9
CCDC7-204ENST00000375025 NEUROD1Q13562 356 aa3.2□□□□□ -1.9
CCDC7-204ENST00000375025 GRIK5Q16478 980 aa3.2□□□□□ -1.9
CCDC7-204ENST00000375025 LRRC69Q6ZNQ3 347 aa3.2□□□□□ -1.9
CCDC7-204ENST00000375025 GCC1Q96CN9 775 aa3.2□□□□□ -1.9
CCDC7-204ENST00000375025 PRM3Q9NNZ6 103 aa3.2□□□□□ -1.9
CCDC7-204ENST00000375025 SLC6A14Q9UN76 642 aa3.2□□□□□ -1.9
CCDC7-204ENST00000375025 KCNH4Q9UQ05 1017 aa3.2□□□□□ -1.9
CCDC7-204ENST00000375025 COL14A1Q05707 1796 aaKnown RBP3.2□□□□□ -1.9
CCDC7-204ENST00000375025 IQGAP3Q86VI3 1631 aa3.2□□□□□ -1.9
CCDC7-204ENST00000375025 USP19O94966 1318 aa3.2□□□□□ -1.9
CCDC7-204ENST00000375025 RAC1P63000 192 aa3.2□□□□□ -1.9
CCDC7-204ENST00000375025 BICDL1Q6ZP65 573 aa3.2□□□□□ -1.9
CCDC7-204ENST00000375025 FAM196AQ6ZSG2 479 aa3.2□□□□□ -1.9
CCDC7-204ENST00000375025 SND1Q7KZF4 910 aaKnown RBP eCLIP3.2□□□□□ -1.9
CCDC7-204ENST00000375025 FBXO11Q86XK2 927 aa3.2□□□□□ -1.9
CCDC7-204ENST00000375025 CERS3Q8IU89 383 aa3.2□□□□□ -1.9
CCDC7-204ENST00000375025 DRC1Q96MC2 740 aa3.2□□□□□ -1.9
CCDC7-204ENST00000375025 C11orf16Q9NQ32 467 aa3.2□□□□□ -1.9
CCDC7-204ENST00000375025 FRRS1LQ9P0K9 344 aa3.2□□□□□ -1.9
CCDC7-204ENST00000375025 ANKIB1Q9P2G1 1089 aa3.2□□□□□ -1.9
CCDC7-204ENST00000375025 KIF1AQ12756 1690 aa3.19□□□□□ -1.9
CCDC7-204ENST00000375025 WASHC2CQ9Y4E1 1318 aa3.19□□□□□ -1.9
CCDC7-204ENST00000375025 TOMM70O94826 608 aa3.19□□□□□ -1.9
CCDC7-204ENST00000375025 ERCC3P19447 782 aa3.19□□□□□ -1.9
CCDC7-204ENST00000375025 AFF1P51825 1210 aaKnown RBP3.19□□□□□ -1.9
CCDC7-204ENST00000375025 IER5Q5VY09 327 aa3.19□□□□□ -1.9
CCDC7-204ENST00000375025 SLC9A9Q8IVB4 645 aa3.19□□□□□ -1.9
CCDC7-204ENST00000375025 PTPRUQ92729 1446 aa3.19□□□□□ -1.9
CCDC7-204ENST00000375025 CCDC141Q6ZP82 1450 aa3.19□□□□□ -1.9
CCDC7-204ENST00000375025 EZH2Q15910 746 aaKnown RBP3.19□□□□□ -1.9
CCDC7-204ENST00000375025 GGT6Q6P531 493 aa3.19□□□□□ -1.9
CCDC7-204ENST00000375025 Q6ZS46 218 aa3.19□□□□□ -1.9
CCDC7-204ENST00000375025 MTFR1LQ9H019 292 aa3.19□□□□□ -1.9
CCDC7-204ENST00000375025 LRPPRCP42704 1394 aaKnown RBP3.18□□□□□ -1.9
CCDC7-204ENST00000375025 DUOX2Q9NRD8 1548 aa3.18□□□□□ -1.9
CCDC7-204ENST00000375025 SERTM1A2A2V5 107 aa3.18□□□□□ -1.9
CCDC7-204ENST00000375025 KIAA1324LA8MWY0 1029 aaPredicted RBP3.18□□□□□ -1.9
CCDC7-204ENST00000375025 HNRNPMP52272 730 aaKnown RBP eCLIP3.18□□□□□ -1.9
CCDC7-204ENST00000375025 PSMA6P60900 246 aaKnown RBP3.18□□□□□ -1.9
CCDC7-204ENST00000375025 DZIP1LQ8IYY4 767 aaKnown RBP3.18□□□□□ -1.9
CCDC7-204ENST00000375025 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.18□□□□□ -1.9
CCDC7-204ENST00000375025 TP53INP1Q96A56 240 aa3.18□□□□□ -1.9
CCDC7-204ENST00000375025 LRRIQ1Q96JM4 1722 aa3.18□□□□□ -1.9
CCDC7-204ENST00000375025 BRD7Q9NPI1 651 aa3.18□□□□□ -1.9
CCDC7-204ENST00000375025 NOD1Q9Y239 953 aa3.18□□□□□ -1.9
CCDC7-204ENST00000375025 THSD7BQ9C0I4 1608 aa3.18□□□□□ -1.9
CCDC7-204ENST00000375025 YTHDC2Q9H6S0 1430 aaKnown RBP3.18□□□□□ -1.9
CCDC7-204ENST00000375025 MAP3K6O95382 1288 aa3.18□□□□□ -1.9
CCDC7-204ENST00000375025 TXKP42681 527 aa3.18□□□□□ -1.9
CCDC7-204ENST00000375025 VAC14Q08AM6 782 aa3.18□□□□□ -1.9
CCDC7-204ENST00000375025 EML3Q32P44 896 aa3.18□□□□□ -1.9
CCDC7-204ENST00000375025 TRAPPC3LQ5T215 181 aa3.18□□□□□ -1.9
CCDC7-204ENST00000375025 PLEKHM2Q8IWE5 1019 aa3.18□□□□□ -1.9
CCDC7-204ENST00000375025 RHPN1Q8TCX5 695 aa3.18□□□□□ -1.9
CCDC7-204ENST00000375025 SREK1Q8WXA9 508 aaKnown RBP3.18□□□□□ -1.9
CCDC7-204ENST00000375025 ALG2Q9H553 416 aa3.18□□□□□ -1.9
CCDC7-204ENST00000375025 SLC52A1Q9NWF4 448 aa3.18□□□□□ -1.9
CCDC7-204ENST00000375025 PARP3Q9Y6F1 533 aa3.18□□□□□ -1.9
CCDC7-204ENST00000375025 PARP4Q9UKK3 1724 aaKnown RBP3.17□□□□□ -1.9
CCDC7-204ENST00000375025 ZBTB7BO15156 539 aaPredicted RBP3.17□□□□□ -1.9
CCDC7-204ENST00000375025 DKK1O94907 266 aa3.17□□□□□ -1.9
CCDC7-204ENST00000375025 GTF2IP78347 998 aa3.17□□□□□ -1.9
CCDC7-204ENST00000375025 PRR23CQ6ZRP0 262 aa3.17□□□□□ -1.9
CCDC7-204ENST00000375025 WWC1Q8IX03 1113 aa3.17□□□□□ -1.9
CCDC7-204ENST00000375025 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.17□□□□□ -1.9
CCDC7-204ENST00000375025 WFDC12Q8WWY7 111 aa3.17□□□□□ -1.9
CCDC7-204ENST00000375025 SUSD3Q96L08 255 aa3.17□□□□□ -1.9
CCDC7-204ENST00000375025 GSX2Q9BZM3 304 aa3.17□□□□□ -1.9
CCDC7-204ENST00000375025 NAGPAQ9UK23 515 aa3.17□□□□□ -1.9
CCDC7-204ENST00000375025 KIF15Q9NS87 1388 aa3.17□□□□□ -1.9
CCDC7-204ENST00000375025 NOS3P29474 1203 aa3.17□□□□□ -1.9
CCDC7-204ENST00000375025 CD97P48960 835 aa3.17□□□□□ -1.9
CCDC7-204ENST00000375025 SETQ01105 290 aaPredicted RBP3.17□□□□□ -1.9
CCDC7-204ENST00000375025 SH3PXD2AQ5TCZ1 1133 aa3.17□□□□□ -1.9
CCDC7-204ENST00000375025 SHISA2Q6UWI4 295 aa3.17□□□□□ -1.9
CCDC7-204ENST00000375025 DMGDHQ9UI17 866 aaKnown RBP3.17□□□□□ -1.9
CCDC7-204ENST00000375025 NRXN3Q9Y4C0 1643 aa3.16□□□□□ -1.9
CCDC7-204ENST00000375025 PIK3CDO00329 1044 aa3.16□□□□□ -1.9
CCDC7-204ENST00000375025 PAX4O43316 350 aa3.16□□□□□ -1.9
CCDC7-204ENST00000375025 HSPA1AP0DMV8 641 aaKnown RBP3.16□□□□□ -1.9
CCDC7-204ENST00000375025 HSPA1BP0DMV9 641 aaKnown RBP3.16□□□□□ -1.9
CCDC7-204ENST00000375025 TCF3P15923 654 aa3.16□□□□□ -1.9
CCDC7-204ENST00000375025 HIF1AQ16665 826 aa3.16□□□□□ -1.9
CCDC7-204ENST00000375025 MSL1Q68DK7 614 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms