RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 RUFY3Q7L099 469 aa18.74■□□□□ 0.59
NIPAL3-204ENST00000374399 CNKSR1Q969H4 720 aa18.74■□□□□ 0.59
NIPAL3-204ENST00000374399 RIOK1Q9BRS2 568 aaKnown RBP18.74■□□□□ 0.59
NIPAL3-204ENST00000374399 SLKQ9H2G2 1235 aaPredicted RBP18.74■□□□□ 0.59
NIPAL3-204ENST00000374399 EPB41L4AQ9HCS5 686 aaPredicted RBP18.74■□□□□ 0.59
NIPAL3-204ENST00000374399 DPP8Q6V1X1 898 aaPredicted RBP18.74■□□□□ 0.59
NIPAL3-204ENST00000374399 ERICH6Q7L0X2 663 aa18.74■□□□□ 0.59
NIPAL3-204ENST00000374399 MIGA1Q8NAN2 632 aa18.74■□□□□ 0.59
NIPAL3-204ENST00000374399 AIDAQ96BJ3 306 aa18.74■□□□□ 0.59
NIPAL3-204ENST00000374399 PRKAB2O43741 272 aa18.73■□□□□ 0.59
NIPAL3-204ENST00000374399 AK2P54819 239 aa18.73■□□□□ 0.59
NIPAL3-204ENST00000374399 R3HDM1Q15032 1099 aaKnown RBP18.73■□□□□ 0.59
NIPAL3-204ENST00000374399 IL27Q8NEV9 243 aa18.73■□□□□ 0.59
NIPAL3-204ENST00000374399 WDR66Q8TBY9 1149 aa18.73■□□□□ 0.59
NIPAL3-204ENST00000374399 TMX3Q96JJ7 454 aa18.73■□□□□ 0.59
NIPAL3-204ENST00000374399 NBPF3Q9H094 633 aa18.73■□□□□ 0.59
NIPAL3-204ENST00000374399 GSG1L2A8MUP6 293 aa18.72■□□□□ 0.59
NIPAL3-204ENST00000374399 RIMBP2O15034 1052 aa18.72■□□□□ 0.59
NIPAL3-204ENST00000374399 MCM2P49736 904 aa18.72■□□□□ 0.59
NIPAL3-204ENST00000374399 ALX1Q15699 326 aa18.72■□□□□ 0.59
NIPAL3-204ENST00000374399 ATF5Q9Y2D1 282 aaPredicted RBP18.72■□□□□ 0.59
NIPAL3-204ENST00000374399 CYP46A1Q9Y6A2 500 aa18.72■□□□□ 0.59
NIPAL3-204ENST00000374399 ZNF646O15015 1829 aaPredicted RBP18.72■□□□□ 0.59
NIPAL3-204ENST00000374399 PATL2C9JE40 543 aaKnown RBP18.71■□□□□ 0.59
NIPAL3-204ENST00000374399 DPEP1P16444 411 aa18.71■□□□□ 0.59
NIPAL3-204ENST00000374399 RPS6KB1P23443 525 aa18.71■□□□□ 0.59
NIPAL3-204ENST00000374399 NAA16Q6N069 864 aaPredicted RBP18.71■□□□□ 0.59
NIPAL3-204ENST00000374399 SGIP1Q9BQI5 828 aa18.71■□□□□ 0.59
NIPAL3-204ENST00000374399 RTFDC1Q9BY42 306 aaPredicted RBP18.71■□□□□ 0.59
NIPAL3-204ENST00000374399 MTFR1LQ9H019 292 aa18.71■□□□□ 0.59
NIPAL3-204ENST00000374399 E7EWF7 191 aa18.71■□□□□ 0.59
NIPAL3-204ENST00000374399 PSMA5P28066 241 aa18.71■□□□□ 0.59
NIPAL3-204ENST00000374399 DYNLL1P63167 89 aaKnown RBP18.71■□□□□ 0.59
NIPAL3-204ENST00000374399 KRT32Q14532 448 aa18.71■□□□□ 0.59
NIPAL3-204ENST00000374399 NEK1Q96PY6 1258 aa18.71■□□□□ 0.59
NIPAL3-204ENST00000374399 COA1Q9GZY4 146 aa18.71■□□□□ 0.59
NIPAL3-204ENST00000374399 PDRG1Q9NUG6 133 aa18.71■□□□□ 0.59
NIPAL3-204ENST00000374399 CTNNA3Q9UI47 895 aa18.71■□□□□ 0.59
NIPAL3-204ENST00000374399 ZMYM6O95789 1325 aa18.71■□□□□ 0.59
NIPAL3-204ENST00000374399 FAM205AQ6ZU69 1335 aa18.71■□□□□ 0.59
NIPAL3-204ENST00000374399 HAND2P61296 217 aa18.7■□□□□ 0.58
NIPAL3-204ENST00000374399 CUL4AQ13619 759 aa18.7■□□□□ 0.58
NIPAL3-204ENST00000374399 IFNL3Q8IZI9 196 aa18.7■□□□□ 0.58
NIPAL3-204ENST00000374399 TCEANC2Q96MN5 208 aa18.7■□□□□ 0.58
NIPAL3-204ENST00000374399 LARP6Q9BRS8 491 aaKnown RBP18.7■□□□□ 0.58
NIPAL3-204ENST00000374399 ALDH8A1Q9H2A2 487 aaPredicted RBP18.7■□□□□ 0.58
NIPAL3-204ENST00000374399 FOXD4L1Q9NU39 408 aa18.7■□□□□ 0.58
NIPAL3-204ENST00000374399 ZNF219Q9P2Y4 722 aaPredicted RBP18.7■□□□□ 0.58
NIPAL3-204ENST00000374399 BRCA1P38398 1863 aaKnown RBP18.7■□□□□ 0.58
NIPAL3-204ENST00000374399 SCN9AQ15858 1988 aa18.7■□□□□ 0.58
NIPAL3-204ENST00000374399 MAGEB6P1A0A0J9YX57 407 aa18.69■□□□□ 0.58
NIPAL3-204ENST00000374399 BLOC1S2Q6QNY1 142 aa18.69■□□□□ 0.58
NIPAL3-204ENST00000374399 NOL8Q76FK4 1167 aaKnown RBP18.69■□□□□ 0.58
NIPAL3-204ENST00000374399 NKX2-3Q8TAU0 364 aa18.69■□□□□ 0.58
NIPAL3-204ENST00000374399 MYH2Q9UKX2 1941 aa18.69■□□□□ 0.58
NIPAL3-204ENST00000374399 TOB2Q14106 344 aaPredicted RBP18.69■□□□□ 0.58
NIPAL3-204ENST00000374399 SPTY2D1Q68D10 685 aaPredicted RBP18.69■□□□□ 0.58
NIPAL3-204ENST00000374399 ZGPATQ8N5A5 531 aaKnown RBP18.69■□□□□ 0.58
NIPAL3-204ENST00000374399 ZC3H12CQ9C0D7 883 aaKnown RBP18.69■□□□□ 0.58
NIPAL3-204ENST00000374399 SLC4A4Q9Y6R1 1079 aa18.69■□□□□ 0.58
NIPAL3-204ENST00000374399 IGSF3O75054 1194 aa18.68■□□□□ 0.58
NIPAL3-204ENST00000374399 LARGE1O95461 756 aa18.68■□□□□ 0.58
NIPAL3-204ENST00000374399 GNAT2P19087 354 aa18.68■□□□□ 0.58
NIPAL3-204ENST00000374399 EXOSC10Q01780 885 aaKnown RBP18.68■□□□□ 0.58
NIPAL3-204ENST00000374399 IMMTQ16891 758 aaKnown RBP18.68■□□□□ 0.58
NIPAL3-204ENST00000374399 DOK7Q18PE1 504 aa18.68■□□□□ 0.58
NIPAL3-204ENST00000374399 TMED8Q6PL24 325 aaPredicted RBP18.68■□□□□ 0.58
NIPAL3-204ENST00000374399 TBC1D10CQ8IV04 446 aa18.68■□□□□ 0.58
NIPAL3-204ENST00000374399 TACC3Q9Y6A5 838 aa18.68■□□□□ 0.58
NIPAL3-204ENST00000374399 BAZ2AQ9UIF9 1905 aaKnown RBP18.68■□□□□ 0.58
NIPAL3-204ENST00000374399 TIAM2Q8IVF5 1701 aa18.67■□□□□ 0.58
NIPAL3-204ENST00000374399 C21orf2O43822 256 aa18.67■□□□□ 0.58
NIPAL3-204ENST00000374399 LDHBP07195 334 aaKnown RBP18.67■□□□□ 0.58
NIPAL3-204ENST00000374399 TTLL6Q8N841 843 aa18.67■□□□□ 0.58
NIPAL3-204ENST00000374399 APPP05067 770 aa18.66■□□□□ 0.58
NIPAL3-204ENST00000374399 GTF2IP78347 998 aa18.66■□□□□ 0.58
NIPAL3-204ENST00000374399 ST3GAL1Q11201 340 aa18.66■□□□□ 0.58
NIPAL3-204ENST00000374399 DIXDC1Q155Q3 683 aa18.66■□□□□ 0.58
NIPAL3-204ENST00000374399 CERS5Q8N5B7 392 aa18.66■□□□□ 0.58
NIPAL3-204ENST00000374399 SDR42E1Q8WUS8 393 aa18.66■□□□□ 0.58
NIPAL3-204ENST00000374399 TMX4Q9H1E5 349 aaPredicted RBP18.66■□□□□ 0.58
NIPAL3-204ENST00000374399 LIMCH1Q9UPQ0 1083 aa18.66■□□□□ 0.58
NIPAL3-204ENST00000374399 CDK5RAP2Q96SN8 1893 aa18.66■□□□□ 0.58
NIPAL3-204ENST00000374399 PSDA5PKW4 1024 aaPredicted RBP18.66■□□□□ 0.58
NIPAL3-204ENST00000374399 ZNF213O14771 459 aa18.66■□□□□ 0.58
NIPAL3-204ENST00000374399 PTGER2P43116 358 aa18.66■□□□□ 0.58
NIPAL3-204ENST00000374399 MFSD14BQ5SR56 506 aa18.66■□□□□ 0.58
NIPAL3-204ENST00000374399 CC2D2BQ6DHV5 1058 aa18.66■□□□□ 0.58
NIPAL3-204ENST00000374399 DZIP1Q86YF9 867 aaKnown RBP18.66■□□□□ 0.58
NIPAL3-204ENST00000374399 EYA3Q99504 573 aa18.66■□□□□ 0.58
NIPAL3-204ENST00000374399 KCNQ5Q9NR82 932 aa18.66■□□□□ 0.58
NIPAL3-204ENST00000374399 AATFQ9NY61 560 aaKnown RBP eCLIP18.66■□□□□ 0.58
NIPAL3-204ENST00000374399 TPCN1Q9ULQ1 816 aa18.66■□□□□ 0.58
NIPAL3-204ENST00000374399 DHX32Q7L7V1 743 aaKnown RBP18.65■□□□□ 0.58
NIPAL3-204ENST00000374399 MB21D2Q8IYB1 491 aaPredicted RBP18.65■□□□□ 0.58
NIPAL3-204ENST00000374399 SMIM22K7EJ46 135 aa18.64■□□□□ 0.57
NIPAL3-204ENST00000374399 POLD1P28340 1107 aa18.64■□□□□ 0.57
NIPAL3-204ENST00000374399 TGFB2P61812 414 aa18.64■□□□□ 0.57
NIPAL3-204ENST00000374399 ME3Q16798 604 aa18.64■□□□□ 0.57
NIPAL3-204ENST00000374399 TBC1D22AQ8WUA7 517 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 164.1 ms