RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 PDIA3P30101 505 aaKnown RBP14.89□□□□□ -0.03
PRPF4-202ENST00000374199 GRAPQ13588 217 aa14.89□□□□□ -0.03
PRPF4-202ENST00000374199 TBC1D10CQ8IV04 446 aa14.89□□□□□ -0.03
PRPF4-202ENST00000374199 GRAPLQ8TC17 118 aaPredicted RBP14.89□□□□□ -0.03
PRPF4-202ENST00000374199 NAV1Q8NEY1 1877 aa14.89□□□□□ -0.03
PRPF4-202ENST00000374199 PDCP20941 246 aa14.88□□□□□ -0.03
PRPF4-202ENST00000374199 PRR5LQ6MZQ0 368 aa14.88□□□□□ -0.03
PRPF4-202ENST00000374199 NKX2-3Q8TAU0 364 aa14.88□□□□□ -0.03
PRPF4-202ENST00000374199 DENND2AQ9ULE3 1009 aa14.88□□□□□ -0.03
PRPF4-202ENST00000374199 WTIPA6NIX2 430 aaPredicted RBP14.88□□□□□ -0.03
PRPF4-202ENST00000374199 FAM177BA6PVY3 158 aa14.88□□□□□ -0.03
PRPF4-202ENST00000374199 RFC4P35249 363 aa14.88□□□□□ -0.03
PRPF4-202ENST00000374199 RBM6P78332 1123 aaKnown RBP14.88□□□□□ -0.03
PRPF4-202ENST00000374199 ADGRA1Q86SQ6 560 aa14.88□□□□□ -0.03
PRPF4-202ENST00000374199 TCEANC2Q96MN5 208 aa14.88□□□□□ -0.03
PRPF4-202ENST00000374199 POLRMTO00411 1230 aaKnown RBP14.87□□□□□ -0.03
PRPF4-202ENST00000374199 MBD3O95983 291 aa14.87□□□□□ -0.03
PRPF4-202ENST00000374199 WASHC4Q2M389 1173 aa14.87□□□□□ -0.03
PRPF4-202ENST00000374199 STAG1Q8WVM7 1258 aa14.87□□□□□ -0.03
PRPF4-202ENST00000374199 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.87□□□□□ -0.03
PRPF4-202ENST00000374199 ZNF772Q68DY9 489 aaPredicted RBP14.87□□□□□ -0.03
PRPF4-202ENST00000374199 GIMAP6Q6P9H5 292 aa14.87□□□□□ -0.03
PRPF4-202ENST00000374199 SGMS1Q86VZ5 419 aa14.87□□□□□ -0.03
PRPF4-202ENST00000374199 NCOA7Q8NI08 942 aa14.87□□□□□ -0.03
PRPF4-202ENST00000374199 BRF1Q92994 677 aa14.87□□□□□ -0.03
PRPF4-202ENST00000374199 PODXL2Q9NZ53 605 aa14.87□□□□□ -0.03
PRPF4-202ENST00000374199 NAA16Q6N069 864 aaPredicted RBP14.87□□□□□ -0.03
PRPF4-202ENST00000374199 IFNL3Q8IZI9 196 aa14.87□□□□□ -0.03
PRPF4-202ENST00000374199 MAGEB6Q8N7X4 407 aa14.87□□□□□ -0.03
PRPF4-202ENST00000374199 CHMP4CQ96CF2 233 aa14.87□□□□□ -0.03
PRPF4-202ENST00000374199 CHAMP1Q96JM3 812 aa14.87□□□□□ -0.03
PRPF4-202ENST00000374199 BAZ2AQ9UIF9 1905 aaKnown RBP14.86□□□□□ -0.03
PRPF4-202ENST00000374199 MCM5P33992 734 aa14.86□□□□□ -0.03
PRPF4-202ENST00000374199 ATP6V1DQ9Y5K8 247 aa14.86□□□□□ -0.03
PRPF4-202ENST00000374199 A0A0G2JS52 829 aa14.86□□□□□ -0.03
PRPF4-202ENST00000374199 ZNF213O14771 459 aa14.86□□□□□ -0.03
PRPF4-202ENST00000374199 L1TD1Q5T7N2 865 aaKnown RBP14.86□□□□□ -0.03
PRPF4-202ENST00000374199 GAS2L3Q86XJ1 694 aa14.86□□□□□ -0.03
PRPF4-202ENST00000374199 NSFL1CQ9UNZ2 370 aaKnown RBP14.86□□□□□ -0.03
PRPF4-202ENST00000374199 LEMD3Q9Y2U8 911 aa14.86□□□□□ -0.03
PRPF4-202ENST00000374199 SH2B2O14492 632 aaPredicted RBP14.85□□□□□ -0.03
PRPF4-202ENST00000374199 IDH1O75874 414 aaKnown RBP14.85□□□□□ -0.03
PRPF4-202ENST00000374199 KLRK1P26718 216 aa14.85□□□□□ -0.03
PRPF4-202ENST00000374199 RCAN1P53805 252 aa14.85□□□□□ -0.03
PRPF4-202ENST00000374199 RESTQ13127 1097 aa14.85□□□□□ -0.03
PRPF4-202ENST00000374199 IGDCC4Q8TDY8 1250 aa14.85□□□□□ -0.03
PRPF4-202ENST00000374199 GNL3LQ9NVN8 582 aaKnown RBP14.85□□□□□ -0.03
PRPF4-202ENST00000374199 GYG1P46976 350 aa14.85□□□□□ -0.03
PRPF4-202ENST00000374199 DDR1Q08345 913 aa14.85□□□□□ -0.03
PRPF4-202ENST00000374199 CDC37L1Q7L3B6 337 aa14.85□□□□□ -0.03
PRPF4-202ENST00000374199 LCORLQ8N3X6 602 aa14.85□□□□□ -0.03
PRPF4-202ENST00000374199 BRPF3Q9ULD4 1205 aa14.85□□□□□ -0.03
PRPF4-202ENST00000374199 KIF13BQ9NQT8 1826 aa14.85□□□□□ -0.03
PRPF4-202ENST00000374199 PRPF40AO75400 957 aaKnown RBP14.85□□□□□ -0.03
PRPF4-202ENST00000374199 HMGN5P82970 282 aaKnown RBP14.85□□□□□ -0.03
PRPF4-202ENST00000374199 ZSCAN23Q3MJ62 389 aa14.85□□□□□ -0.03
PRPF4-202ENST00000374199 BRIP1Q9BX63 1249 aa14.85□□□□□ -0.03
PRPF4-202ENST00000374199 NEDD4P46934 1319 aa14.84□□□□□ -0.03
PRPF4-202ENST00000374199 FDPSP14324 419 aaKnown RBP14.84□□□□□ -0.03
PRPF4-202ENST00000374199 ADD1P35611 737 aaKnown RBP14.84□□□□□ -0.03
PRPF4-202ENST00000374199 LIFRP42702 1097 aa14.84□□□□□ -0.03
PRPF4-202ENST00000374199 USP48Q86UV5 1035 aa14.84□□□□□ -0.03
PRPF4-202ENST00000374199 CNBD1Q8NA66 436 aa14.84□□□□□ -0.03
PRPF4-202ENST00000374199 NSUN4Q96CB9 384 aaKnown RBP14.84□□□□□ -0.03
PRPF4-202ENST00000374199 SNED1Q8TER0 1413 aa14.84□□□□□ -0.03
PRPF4-202ENST00000374199 MBD4O95243 580 aa14.84□□□□□ -0.03
PRPF4-202ENST00000374199 APOBRQ0VD83 1088 aa14.84□□□□□ -0.03
PRPF4-202ENST00000374199 TXNRD1Q16881 649 aa14.84□□□□□ -0.03
PRPF4-202ENST00000374199 CAVIN4Q5BKX8 364 aa14.84□□□□□ -0.03
PRPF4-202ENST00000374199 CYB5R4Q7L1T6 521 aa14.84□□□□□ -0.03
PRPF4-202ENST00000374199 TMEM87BQ96K49 555 aa14.84□□□□□ -0.03
PRPF4-202ENST00000374199 CRAMP1Q96RY5 1269 aa14.84□□□□□ -0.03
PRPF4-202ENST00000374199 TMEM63CQ9P1W3 806 aa14.84□□□□□ -0.03
PRPF4-202ENST00000374199 PSME4Q14997 1843 aa14.83□□□□□ -0.03
PRPF4-202ENST00000374199 PRC1O43663 620 aa14.83□□□□□ -0.03
PRPF4-202ENST00000374199 JAK2O60674 1132 aa14.83□□□□□ -0.03
PRPF4-202ENST00000374199 XRCC6P12956 609 aaKnown RBP eCLIP14.83□□□□□ -0.03
PRPF4-202ENST00000374199 MRE11P49959 708 aa14.83□□□□□ -0.03
PRPF4-202ENST00000374199 BICDL1Q6ZP65 573 aa14.83□□□□□ -0.03
PRPF4-202ENST00000374199 TDRD7Q8NHU6 1098 aaKnown RBP14.83□□□□□ -0.03
PRPF4-202ENST00000374199 AIDAQ96BJ3 306 aa14.83□□□□□ -0.03
PRPF4-202ENST00000374199 DDX49Q9Y6V7 483 aaKnown RBP14.83□□□□□ -0.03
PRPF4-202ENST00000374199 ROBO3Q96MS0 1386 aa14.83□□□□□ -0.04
PRPF4-202ENST00000374199 NT5C2P49902 561 aa14.83□□□□□ -0.04
PRPF4-202ENST00000374199 PCP11498 1178 aaKnown RBP14.83□□□□□ -0.04
PRPF4-202ENST00000374199 MKRN1Q9UHC7 482 aaKnown RBP14.83□□□□□ -0.04
PRPF4-202ENST00000374199 XDHP47989 1333 aa14.83□□□□□ -0.04
PRPF4-202ENST00000374199 MYH2Q9UKX2 1941 aa14.82□□□□□ -0.04
PRPF4-202ENST00000374199 GOLGA6L3A6NEY3 463 aa14.82□□□□□ -0.04
PRPF4-202ENST00000374199 LARP1BQ659C4 914 aaKnown RBP14.82□□□□□ -0.04
PRPF4-202ENST00000374199 CNNM2Q9H8M5 875 aa14.82□□□□□ -0.04
PRPF4-202ENST00000374199 LY9Q9HBG7 655 aa14.82□□□□□ -0.04
PRPF4-202ENST00000374199 IL1R1P14778 569 aa14.82□□□□□ -0.04
PRPF4-202ENST00000374199 UBE2HP62256 183 aa14.82□□□□□ -0.04
PRPF4-202ENST00000374199 ZNF827Q17R98 1081 aa14.82□□□□□ -0.04
PRPF4-202ENST00000374199 TMC4Q7Z404 712 aa14.82□□□□□ -0.04
PRPF4-202ENST00000374199 ZSCAN16Q9H4T2 348 aaPredicted RBP14.81□□□□□ -0.04
PRPF4-202ENST00000374199 ARMT1Q9H993 441 aa14.81□□□□□ -0.04
PRPF4-202ENST00000374199 ANGEL1Q9UNK9 670 aaKnown RBP14.81□□□□□ -0.04
PRPF4-202ENST00000374199 CNPY2Q9Y2B0 182 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms