RNA–Protein interactions for RNA: ENST00000372837.3

CHCHD1-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 1, humanhuman

TSL 2 BASIC

Gene CHCHD1, Length 1,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1-202ENST00000372837 PRO3102Q9H379 93 aa15.36■□□□□ 0.05
CHCHD1-202ENST00000372837 DBNDD1Q9H9R9 158 aa15.36■□□□□ 0.05
CHCHD1-202ENST00000372837 DUOX1Q9NRD9 1551 aa15.36■□□□□ 0.05
CHCHD1-202ENST00000372837 RTL9Q8NET4 1388 aa15.36■□□□□ 0.05
CHCHD1-202ENST00000372837 BBOX1O75936 387 aa15.35■□□□□ 0.05
CHCHD1-202ENST00000372837 HOXB7P09629 217 aa15.35■□□□□ 0.05
CHCHD1-202ENST00000372837 PIBF1Q8WXW3 757 aa15.35■□□□□ 0.05
CHCHD1-202ENST00000372837 SPTLC3Q9NUV7 552 aa15.35■□□□□ 0.05
CHCHD1-202ENST00000372837 PRDM4Q9UKN5 801 aa15.35■□□□□ 0.05
CHCHD1-202ENST00000372837 PRPF40AO75400 957 aaKnown RBP15.34■□□□□ 0.05
CHCHD1-202ENST00000372837 SCARF1Q14162 830 aa15.34■□□□□ 0.05
CHCHD1-202ENST00000372837 SYCP1Q15431 976 aa15.34■□□□□ 0.05
CHCHD1-202ENST00000372837 GPT2Q8TD30 523 aa15.34■□□□□ 0.05
CHCHD1-202ENST00000372837 ZNF333Q96JL9 665 aa15.34■□□□□ 0.05
CHCHD1-202ENST00000372837 COL25A1Q9BXS0 654 aaPredicted RBP15.34■□□□□ 0.05
CHCHD1-202ENST00000372837 USP25Q9UHP3 1055 aa15.34■□□□□ 0.05
CHCHD1-202ENST00000372837 SCAF8Q9UPN6 1271 aaKnown RBP15.34■□□□□ 0.05
CHCHD1-202ENST00000372837 ATP6V1DQ9Y5K8 247 aa15.34■□□□□ 0.05
CHCHD1-202ENST00000372837 MAP3K15Q6ZN16 1313 aa15.34■□□□□ 0.05
CHCHD1-202ENST00000372837 LAMA3Q16787 3333 aa15.34■□□□□ 0.05
CHCHD1-202ENST00000372837 SOX1O00570 391 aaPredicted RBP15.33■□□□□ 0.04
CHCHD1-202ENST00000372837 KIF20AO95235 890 aa15.33■□□□□ 0.04
CHCHD1-202ENST00000372837 PRAMEF18Q5VWM3 479 aa15.33■□□□□ 0.04
CHCHD1-202ENST00000372837 TTLL7Q6ZT98 887 aa15.33■□□□□ 0.04
CHCHD1-202ENST00000372837 ZNF34Q8IZ26 560 aa15.33■□□□□ 0.04
CHCHD1-202ENST00000372837 CD99L2Q8TCZ2 262 aa15.33■□□□□ 0.04
CHCHD1-202ENST00000372837 MEIS3Q99687 375 aa15.33■□□□□ 0.04
CHCHD1-202ENST00000372837 DIAPH3Q9NSV4 1193 aa15.33■□□□□ 0.04
CHCHD1-202ENST00000372837 NUP98P52948 1817 aa15.33■□□□□ 0.04
CHCHD1-202ENST00000372837 ALDH1A1P00352 501 aa15.32■□□□□ 0.04
CHCHD1-202ENST00000372837 CAP1Q01518 475 aa15.32■□□□□ 0.04
CHCHD1-202ENST00000372837 TAF7Q15545 349 aaPredicted RBP15.32■□□□□ 0.04
CHCHD1-202ENST00000372837 WASHC4Q2M389 1173 aa15.32■□□□□ 0.04
CHCHD1-202ENST00000372837 SLC10A5Q5PT55 438 aa15.32■□□□□ 0.04
CHCHD1-202ENST00000372837 TAF3Q5VWG9 929 aa15.32■□□□□ 0.04
CHCHD1-202ENST00000372837 ZDHHC9Q9Y397 364 aa15.32■□□□□ 0.04
CHCHD1-202ENST00000372837 ZNF609O15014 1411 aa15.32■□□□□ 0.04
CHCHD1-202ENST00000372837 UNC80Q8N2C7 3258 aa15.31■□□□□ 0.04
CHCHD1-202ENST00000372837 RIMBP2O15034 1052 aa15.31■□□□□ 0.04
CHCHD1-202ENST00000372837 SDSP20132 328 aa15.31■□□□□ 0.04
CHCHD1-202ENST00000372837 FAM193AP78312 1265 aa15.31■□□□□ 0.04
CHCHD1-202ENST00000372837 ERO1AQ96HE7 468 aa15.31■□□□□ 0.04
CHCHD1-202ENST00000372837 EFCC1Q9HA90 598 aa15.31■□□□□ 0.04
CHCHD1-202ENST00000372837 TMEM63CQ9P1W3 806 aa15.31■□□□□ 0.04
CHCHD1-202ENST00000372837 HDAC5Q9UQL6 1122 aa15.31■□□□□ 0.04
CHCHD1-202ENST00000372837 ECE2O60344 883 aa15.3■□□□□ 0.04
CHCHD1-202ENST00000372837 VIL1P09327 827 aaKnown RBP15.3■□□□□ 0.04
CHCHD1-202ENST00000372837 ZNF280AP59817 542 aaPredicted RBP15.3■□□□□ 0.04
CHCHD1-202ENST00000372837 ATP8B2P98198 1209 aa15.3■□□□□ 0.04
CHCHD1-202ENST00000372837 FLIIQ13045 1269 aa15.3■□□□□ 0.04
CHCHD1-202ENST00000372837 TTLL12Q14166 644 aaPredicted RBP15.3■□□□□ 0.04
CHCHD1-202ENST00000372837 DOK7Q18PE1 504 aa15.3■□□□□ 0.04
CHCHD1-202ENST00000372837 LRCH3Q96II8 777 aa15.3■□□□□ 0.04
CHCHD1-202ENST00000372837 LRRCC1Q9C099 1032 aa15.3■□□□□ 0.04
CHCHD1-202ENST00000372837 ZBTB3Q9H5J0 574 aa15.3■□□□□ 0.04
CHCHD1-202ENST00000372837 RAB11FIP3O75154 756 aa15.29■□□□□ 0.04
CHCHD1-202ENST00000372837 PTPN12Q05209 780 aaKnown RBP15.29■□□□□ 0.04
CHCHD1-202ENST00000372837 KRT24Q2M2I5 525 aa15.29■□□□□ 0.04
CHCHD1-202ENST00000372837 SLC4A8Q2Y0W8 1093 aa15.29■□□□□ 0.04
CHCHD1-202ENST00000372837 CCDC183Q5T5S1 534 aa15.29■□□□□ 0.04
CHCHD1-202ENST00000372837 SPRYD7Q5W111 196 aa15.29■□□□□ 0.04
CHCHD1-202ENST00000372837 IFNL1Q8IU54 200 aa15.29■□□□□ 0.04
CHCHD1-202ENST00000372837 PDCL2Q8N4E4 241 aa15.29■□□□□ 0.04
CHCHD1-202ENST00000372837 TMX3Q96JJ7 454 aa15.29■□□□□ 0.04
CHCHD1-202ENST00000372837 FAM13BQ9NYF5 915 aa15.29■□□□□ 0.04
CHCHD1-202ENST00000372837 STAP2Q9UGK3 403 aa15.29■□□□□ 0.04
CHCHD1-202ENST00000372837 GOLGA6L6A8MZA4 724 aa15.28■□□□□ 0.04
CHCHD1-202ENST00000372837 PDE1AP54750 535 aa15.28■□□□□ 0.04
CHCHD1-202ENST00000372837 DMTNQ08495 405 aa15.28■□□□□ 0.04
CHCHD1-202ENST00000372837 FKBP5Q13451 457 aaPredicted RBP15.28■□□□□ 0.04
CHCHD1-202ENST00000372837 GRAPQ13588 217 aa15.28■□□□□ 0.04
CHCHD1-202ENST00000372837 SLC4A10Q6U841 1118 aa15.28■□□□□ 0.04
CHCHD1-202ENST00000372837 KIF6Q6ZMV9 814 aa15.28■□□□□ 0.04
CHCHD1-202ENST00000372837 PPP1R42Q7Z4L9 355 aa15.28■□□□□ 0.04
CHCHD1-202ENST00000372837 GRAPLQ8TC17 118 aaPredicted RBP15.28■□□□□ 0.04
CHCHD1-202ENST00000372837 DPF3Q92784 378 aa15.28■□□□□ 0.04
CHCHD1-202ENST00000372837 FEZ1Q99689 392 aa15.28■□□□□ 0.04
CHCHD1-202ENST00000372837 WTIPA6NIX2 430 aaPredicted RBP15.27■□□□□ 0.04
CHCHD1-202ENST00000372837 PTMAP06454 111 aaKnown RBP15.27■□□□□ 0.04
CHCHD1-202ENST00000372837 TCIRG1Q13488 830 aa15.27■□□□□ 0.04
CHCHD1-202ENST00000372837 HSP90AB4PQ58FF6 505 aa15.27■□□□□ 0.04
CHCHD1-202ENST00000372837 POLLQ9UGP5 575 aa15.27■□□□□ 0.04
CHCHD1-202ENST00000372837 SYCE3A1L190 88 aa15.26■□□□□ 0.03
CHCHD1-202ENST00000372837 IGF2BP3O00425 579 aaKnown RBP eCLIP15.26■□□□□ 0.03
CHCHD1-202ENST00000372837 MYCP01106 439 aaPredicted RBP15.26■□□□□ 0.03
CHCHD1-202ENST00000372837 MX1P20591 662 aa15.26■□□□□ 0.03
CHCHD1-202ENST00000372837 GIGYF2Q6Y7W6 1299 aaKnown RBP15.26■□□□□ 0.03
CHCHD1-202ENST00000372837 DDX46Q7L014 1031 aaKnown RBP15.26■□□□□ 0.03
CHCHD1-202ENST00000372837 UTP14AQ9BVJ6 771 aaKnown RBP15.26■□□□□ 0.03
CHCHD1-202ENST00000372837 NSFL1CQ9UNZ2 370 aaKnown RBP15.26■□□□□ 0.03
CHCHD1-202ENST00000372837 SCN9AQ15858 1988 aa15.25■□□□□ 0.03
CHCHD1-202ENST00000372837 SALL3Q9BXA9 1300 aa15.25■□□□□ 0.03
CHCHD1-202ENST00000372837 C6orf229H3BNL8 230 aa15.25■□□□□ 0.03
CHCHD1-202ENST00000372837 HCLS1P14317 486 aaPredicted RBP15.25■□□□□ 0.03
CHCHD1-202ENST00000372837 UBE2HP62256 183 aa15.25■□□□□ 0.03
CHCHD1-202ENST00000372837 CHAF1AQ13111 956 aaPredicted RBP15.25■□□□□ 0.03
CHCHD1-202ENST00000372837 NOLC1Q14978 699 aaKnown RBP eCLIP15.25■□□□□ 0.03
CHCHD1-202ENST00000372837 SLC9C1Q4G0N8 1177 aa15.25■□□□□ 0.03
CHCHD1-202ENST00000372837 PARP10Q53GL7 1025 aa15.25■□□□□ 0.03
CHCHD1-202ENST00000372837 ESYT1Q9BSJ8 1104 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms