RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 PDCL2Q8N4E4 241 aa22.27■■□□□ 1.16
TMEM53-202ENST00000372237 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.27■■□□□ 1.16
TMEM53-202ENST00000372237 TMOD3Q9NYL9 352 aa22.27■■□□□ 1.16
TMEM53-202ENST00000372237 METTL24Q5JXM2 366 aa22.26■■□□□ 1.15
TMEM53-202ENST00000372237 PPP4R3BQ5MIZ7 849 aa22.26■■□□□ 1.15
TMEM53-202ENST00000372237 PAXBP1Q9Y5B6 917 aa22.26■■□□□ 1.15
TMEM53-202ENST00000372237 ANKRD7Q92527 254 aa22.26■■□□□ 1.15
TMEM53-202ENST00000372237 GJB4Q9NTQ9 266 aa22.26■■□□□ 1.15
TMEM53-202ENST00000372237 KIAA1468Q9P260 1216 aa22.26■■□□□ 1.15
TMEM53-202ENST00000372237 SKILP12757 684 aa22.25■■□□□ 1.15
TMEM53-202ENST00000372237 RBM6P78332 1123 aaKnown RBP22.25■■□□□ 1.15
TMEM53-202ENST00000372237 TRDNQ13061 729 aa22.25■■□□□ 1.15
TMEM53-202ENST00000372237 MCAMP43121 646 aa22.25■■□□□ 1.15
TMEM53-202ENST00000372237 LDHAL6AQ6ZMR3 332 aa22.25■■□□□ 1.15
TMEM53-202ENST00000372237 WDR19Q8NEZ3 1342 aa22.25■■□□□ 1.15
TMEM53-202ENST00000372237 SHANK3Q9BYB0 1731 aa22.24■■□□□ 1.15
TMEM53-202ENST00000372237 CCDC69A6NI79 296 aa22.24■■□□□ 1.15
TMEM53-202ENST00000372237 DNAJC10Q8IXB1 793 aa22.24■■□□□ 1.15
TMEM53-202ENST00000372237 AHDC1Q5TGY3 1603 aaPredicted RBP22.24■■□□□ 1.15
TMEM53-202ENST00000372237 LTBP4Q8N2S1 1624 aa22.24■■□□□ 1.15
TMEM53-202ENST00000372237 DDX60Q8IY21 1712 aaKnown RBP22.24■■□□□ 1.15
TMEM53-202ENST00000372237 RIC1Q4ADV7 1423 aa22.23■■□□□ 1.15
TMEM53-202ENST00000372237 KIF28PB7ZC32 967 aa22.23■■□□□ 1.15
TMEM53-202ENST00000372237 DPCR1Q3MIW9 517 aa22.23■■□□□ 1.15
TMEM53-202ENST00000372237 CCDC112Q8NEF3 446 aa22.23■■□□□ 1.15
TMEM53-202ENST00000372237 TEX13AQ9BXU3 409 aaPredicted RBP22.23■■□□□ 1.15
TMEM53-202ENST00000372237 RIPOR2Q9Y4F9 1068 aa22.23■■□□□ 1.15
TMEM53-202ENST00000372237 ITGA6P23229 1130 aa22.23■■□□□ 1.15
TMEM53-202ENST00000372237 KIF23Q02241 960 aaPredicted RBP22.23■■□□□ 1.15
TMEM53-202ENST00000372237 SLC9C2Q5TAH2 1124 aa22.23■■□□□ 1.15
TMEM53-202ENST00000372237 ANO1Q5XXA6 986 aa22.23■■□□□ 1.15
TMEM53-202ENST00000372237 CEP135Q66GS9 1140 aa22.23■■□□□ 1.15
TMEM53-202ENST00000372237 SYNE4Q8N205 404 aa22.23■■□□□ 1.15
TMEM53-202ENST00000372237 ZNF202O95125 648 aa22.22■■□□□ 1.15
TMEM53-202ENST00000372237 SLC3A2P08195 630 aaKnown RBP22.22■■□□□ 1.15
TMEM53-202ENST00000372237 ADD2P35612 726 aa22.22■■□□□ 1.15
TMEM53-202ENST00000372237 SMAP1Q8IYB5 467 aaPredicted RBP22.22■■□□□ 1.15
TMEM53-202ENST00000372237 ZNF592Q92610 1267 aa22.22■■□□□ 1.15
TMEM53-202ENST00000372237 ANGEL1Q9UNK9 670 aaKnown RBP22.22■■□□□ 1.15
TMEM53-202ENST00000372237 GIGYF2Q6Y7W6 1299 aaKnown RBP22.22■■□□□ 1.15
TMEM53-202ENST00000372237 CNNM1Q9NRU3 951 aa22.22■■□□□ 1.15
TMEM53-202ENST00000372237 USP27XA6NNY8 438 aa22.21■■□□□ 1.15
TMEM53-202ENST00000372237 GPTP24298 496 aa22.21■■□□□ 1.15
TMEM53-202ENST00000372237 CCZ1BP86790 482 aa22.21■■□□□ 1.15
TMEM53-202ENST00000372237 CCZ1P86791 482 aaPredicted RBP22.21■■□□□ 1.15
TMEM53-202ENST00000372237 TTF1Q15361 905 aaPredicted RBP22.21■■□□□ 1.15
TMEM53-202ENST00000372237 BPIFA3Q9BQP9 254 aa22.21■■□□□ 1.15
TMEM53-202ENST00000372237 GREM2Q9H772 168 aa22.21■■□□□ 1.15
TMEM53-202ENST00000372237 ASAP1Q9ULH1 1129 aa22.21■■□□□ 1.15
TMEM53-202ENST00000372237 AKAP11Q9UKA4 1901 aa22.21■■□□□ 1.15
TMEM53-202ENST00000372237 NEDD4P46934 1319 aa22.21■■□□□ 1.15
TMEM53-202ENST00000372237 MAP3K15Q6ZN16 1313 aa22.21■■□□□ 1.15
TMEM53-202ENST00000372237 CDHR2Q9BYE9 1310 aa22.21■■□□□ 1.15
TMEM53-202ENST00000372237 STARD3NLO95772 234 aa22.2■■□□□ 1.15
TMEM53-202ENST00000372237 APPP05067 770 aa22.2■■□□□ 1.15
TMEM53-202ENST00000372237 GSDMDP57764 484 aa22.2■■□□□ 1.15
TMEM53-202ENST00000372237 TTLL11Q8NHH1 800 aa22.2■■□□□ 1.15
TMEM53-202ENST00000372237 NBPF3Q9H094 633 aa22.2■■□□□ 1.15
TMEM53-202ENST00000372237 DENND2AQ9ULE3 1009 aa22.2■■□□□ 1.15
TMEM53-202ENST00000372237 C4AP0C0L4 1744 aa22.2■■□□□ 1.15
TMEM53-202ENST00000372237 C4BP0C0L5 1744 aa22.2■■□□□ 1.15
TMEM53-202ENST00000372237 ZMYM6O95789 1325 aa22.2■■□□□ 1.14
TMEM53-202ENST00000372237 TOGARAM1Q9Y4F4 1720 aa22.2■■□□□ 1.14
TMEM53-202ENST00000372237 METAP2P50579 478 aaKnown RBP eCLIP22.2■■□□□ 1.14
TMEM53-202ENST00000372237 NCBP1Q09161 790 aaKnown RBP22.2■■□□□ 1.14
TMEM53-202ENST00000372237 SYCP1Q15431 976 aa22.2■■□□□ 1.14
TMEM53-202ENST00000372237 PTPN14Q15678 1187 aa22.2■■□□□ 1.14
TMEM53-202ENST00000372237 ANKRD18BA2A2Z9 1011 aa22.19■■□□□ 1.14
TMEM53-202ENST00000372237 BIN1O00499 593 aa22.19■■□□□ 1.14
TMEM53-202ENST00000372237 IDH1O75874 414 aaKnown RBP22.19■■□□□ 1.14
TMEM53-202ENST00000372237 PFKFB1P16118 471 aa22.19■■□□□ 1.14
TMEM53-202ENST00000372237 CMA1P23946 247 aa22.19■■□□□ 1.14
TMEM53-202ENST00000372237 CBX1P83916 185 aa22.19■■□□□ 1.14
TMEM53-202ENST00000372237 HLFQ16534 295 aa22.19■■□□□ 1.14
TMEM53-202ENST00000372237 AXDND1Q5T1B0 1012 aaPredicted RBP22.19■■□□□ 1.14
TMEM53-202ENST00000372237 NBPF11Q86T75 865 aa22.19■■□□□ 1.14
TMEM53-202ENST00000372237 TBC1D10CQ8IV04 446 aa22.19■■□□□ 1.14
TMEM53-202ENST00000372237 ZNF512BQ96KM6 892 aaPredicted RBP22.19■■□□□ 1.14
TMEM53-202ENST00000372237 ALG1Q9BT22 464 aa22.19■■□□□ 1.14
TMEM53-202ENST00000372237 COL14A1Q05707 1796 aaKnown RBP22.19■■□□□ 1.14
TMEM53-202ENST00000372237 DISP2A7MBM2 1401 aa22.18■■□□□ 1.14
TMEM53-202ENST00000372237 CDKL5O76039 1030 aa22.18■■□□□ 1.14
TMEM53-202ENST00000372237 CYB5R4Q7L1T6 521 aa22.18■■□□□ 1.14
TMEM53-202ENST00000372237 NLRP10Q86W26 655 aa22.18■■□□□ 1.14
TMEM53-202ENST00000372237 PIGBQ92521 554 aa22.18■■□□□ 1.14
TMEM53-202ENST00000372237 IMPACTQ9P2X3 320 aa22.18■■□□□ 1.14
TMEM53-202ENST00000372237 SMC2O95347 1197 aa22.18■■□□□ 1.14
TMEM53-202ENST00000372237 MARCKSP29966 332 aaPredicted RBP22.18■■□□□ 1.14
TMEM53-202ENST00000372237 CTSWP56202 376 aa22.18■■□□□ 1.14
TMEM53-202ENST00000372237 NLRP12P59046 1061 aa22.18■■□□□ 1.14
TMEM53-202ENST00000372237 TPM4P67936 248 aa22.18■■□□□ 1.14
TMEM53-202ENST00000372237 SLC39A14Q15043 492 aa22.18■■□□□ 1.14
TMEM53-202ENST00000372237 RGS22Q8NE09 1264 aa22.18■■□□□ 1.14
TMEM53-202ENST00000372237 AIFM3Q96NN9 605 aa22.18■■□□□ 1.14
TMEM53-202ENST00000372237 COL22A1Q8NFW1 1626 aaPredicted RBP22.17■■□□□ 1.14
TMEM53-202ENST00000372237 SH2B2O14492 632 aaPredicted RBP22.17■■□□□ 1.14
TMEM53-202ENST00000372237 RXRAP19793 462 aa22.17■■□□□ 1.14
TMEM53-202ENST00000372237 UBE3CQ15386 1083 aa22.17■■□□□ 1.14
TMEM53-202ENST00000372237 CPLX2Q6PUV4 134 aaKnown RBP22.17■■□□□ 1.14
TMEM53-202ENST00000372237 NYAP1Q6ZVC0 841 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms