RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 SYCP3Q8IZU3 236 aa15.12■□□□□ 0.01
RAPGEF1-201ENST00000372189 SH2D4AQ9H788 454 aa15.12■□□□□ 0.01
RAPGEF1-201ENST00000372189 A0A1B0GUL7 405 aa15.11■□□□□ 0.01
RAPGEF1-201ENST00000372189 PDE6BP35913 854 aa15.11■□□□□ 0.01
RAPGEF1-201ENST00000372189 ERVK-7P63135 1459 aa15.11■□□□□ 0.01
RAPGEF1-201ENST00000372189 VGLL3A8MV65 326 aa15.11■□□□□ 0.01
RAPGEF1-201ENST00000372189 TNNQ9UQP3 1299 aa15.11■□□□□ 0.01
RAPGEF1-201ENST00000372189 RXRBP28702 533 aa15.11■□□□□ 0.01
RAPGEF1-201ENST00000372189 GIMAP6Q6P9H5 292 aa15.11■□□□□ 0.01
RAPGEF1-201ENST00000372189 C6orf50Q9HD87 102 aa15.11■□□□□ 0.01
RAPGEF1-201ENST00000372189 USP19O94966 1318 aa15.11■□□□□ 0.01
RAPGEF1-201ENST00000372189 TBCAO75347 108 aaKnown RBP15.11■□□□□ 0.01
RAPGEF1-201ENST00000372189 CETN1Q12798 172 aa15.11■□□□□ 0.01
RAPGEF1-201ENST00000372189 SAP30BPQ9UHR5 308 aaKnown RBP15.11■□□□□ 0.01
RAPGEF1-201ENST00000372189 BIN1O00499 593 aa15.1■□□□□ 0.01
RAPGEF1-201ENST00000372189 BMP15O95972 392 aa15.1■□□□□ 0.01
RAPGEF1-201ENST00000372189 EIF4A1P60842 406 aaKnown RBP15.1■□□□□ 0.01
RAPGEF1-201ENST00000372189 GNG11P61952 73 aa15.1■□□□□ 0.01
RAPGEF1-201ENST00000372189 KANK3Q6NY19 840 aa15.1■□□□□ 0.01
RAPGEF1-201ENST00000372189 CCDC24Q8N4L8 307 aa15.1■□□□□ 0.01
RAPGEF1-201ENST00000372189 PICK1Q9NRD5 415 aa15.1■□□□□ 0.01
RAPGEF1-201ENST00000372189 MBD4O95243 580 aa15.1■□□□□ 0.01
RAPGEF1-201ENST00000372189 ANAPC15P60006 121 aa15.1■□□□□ 0.01
RAPGEF1-201ENST00000372189 C8orf34Q49A92 452 aa15.1■□□□□ 0.01
RAPGEF1-201ENST00000372189 NECAB1Q8N987 351 aa15.1■□□□□ 0.01
RAPGEF1-201ENST00000372189 HELLSQ9NRZ9 838 aa15.1■□□□□ 0.01
RAPGEF1-201ENST00000372189 TUBB4AP04350 444 aa15.1■□□□□ 0.01
RAPGEF1-201ENST00000372189 BICD1Q96G01 975 aa15.1■□□□□ 0.01
RAPGEF1-201ENST00000372189 PANK2Q9BZ23 570 aa15.1■□□□□ 0.01
RAPGEF1-201ENST00000372189 TNNI3KQ59H18 835 aa15.09■□□□□ 0.01
RAPGEF1-201ENST00000372189 EHBP1Q8NDI1 1231 aa15.09■□□□□ 0.01
RAPGEF1-201ENST00000372189 GTPBP4Q9BZE4 634 aaKnown RBP15.09■□□□□ 0.01
RAPGEF1-201ENST00000372189 GOPCQ9HD26 462 aa15.09■□□□□ 0.01
RAPGEF1-201ENST00000372189 ZBTB40Q9NUA8 1239 aa15.09■□□□□ 0.01
RAPGEF1-201ENST00000372189 FPGT-TNNI3KV9GXZ4 949 aa15.09■□□□□ 0.01
RAPGEF1-201ENST00000372189 FAM135BQ49AJ0 1406 aa15.09■□□□□ 0.01
RAPGEF1-201ENST00000372189 XAGE2Q96GT9 111 aa15.09■□□□□ 0.01
RAPGEF1-201ENST00000372189 SPDYE3A6NKU9 549 aa15.09■□□□□ 0.01
RAPGEF1-201ENST00000372189 IVLP07476 585 aa15.09■□□□□ 0.01
RAPGEF1-201ENST00000372189 MSL1Q68DK7 614 aa15.09■□□□□ 0.01
RAPGEF1-201ENST00000372189 NIM1KQ8IY84 436 aa15.09■□□□□ 0.01
RAPGEF1-201ENST00000372189 FAM200AQ8TCP9 573 aa15.09■□□□□ 0.01
RAPGEF1-201ENST00000372189 C10orf67Q8IYJ2 551 aa15.09■□□□□ 0.01
RAPGEF1-201ENST00000372189 ZNF594Q96JF6 807 aaPredicted RBP15.09■□□□□ 0.01
RAPGEF1-201ENST00000372189 ZNF830Q96NB3 372 aaPredicted RBP15.09■□□□□ 0.01
RAPGEF1-201ENST00000372189 TRIM35Q9UPQ4 493 aa15.09■□□□□ 0.01
RAPGEF1-201ENST00000372189 SBNO2Q9Y2G9 1366 aa15.09■□□□□ 0.01
RAPGEF1-201ENST00000372189 MROH5Q6ZUA9 1318 aa15.08■□□□□ 0.01
RAPGEF1-201ENST00000372189 TCEANC2Q96MN5 208 aa15.08■□□□□ 0.01
RAPGEF1-201ENST00000372189 KIAA0232Q92628 1395 aa15.08■□□□□ 0.01
RAPGEF1-201ENST00000372189 KDM6BO15054 1643 aa15.08■□□□□ 0
RAPGEF1-201ENST00000372189 RLBP1P12271 317 aa15.08■□□□□ 0
RAPGEF1-201ENST00000372189 BTN2A1Q7KYR7 527 aa15.08■□□□□ 0
RAPGEF1-201ENST00000372189 INSRP06213 1382 aa15.08■□□□□ 0
RAPGEF1-201ENST00000372189 RAD50Q92878 1312 aa15.08■□□□□ 0
RAPGEF1-201ENST00000372189 TIMM10P62072 90 aa15.08■□□□□ 0
RAPGEF1-201ENST00000372189 UIMC1Q96RL1 719 aa15.08■□□□□ 0
RAPGEF1-201ENST00000372189 RAB3GAP1Q15042 981 aa15.08■□□□□ 0
RAPGEF1-201ENST00000372189 CCDC40Q4G0X9 1142 aa15.08■□□□□ 0
RAPGEF1-201ENST00000372189 TDRD12Q587J7 1177 aaKnown RBP15.08■□□□□ 0
RAPGEF1-201ENST00000372189 USP48Q86UV5 1035 aa15.08■□□□□ 0
RAPGEF1-201ENST00000372189 HOOK2Q96ED9 719 aa15.08■□□□□ 0
RAPGEF1-201ENST00000372189 TAF5LO75529 589 aa15.08■□□□□ 0
RAPGEF1-201ENST00000372189 PPM1EQ8WY54 764 aa15.08■□□□□ 0
RAPGEF1-201ENST00000372189 CCDC94Q9BW85 323 aaPredicted RBP15.08■□□□□ 0
RAPGEF1-201ENST00000372189 TMOD4Q9NZQ9 345 aa15.08■□□□□ 0
RAPGEF1-201ENST00000372189 SKILP12757 684 aa15.07■□□□□ 0
RAPGEF1-201ENST00000372189 GCKRQ14397 625 aa15.07■□□□□ 0
RAPGEF1-201ENST00000372189 ANO6Q4KMQ2 910 aa15.07■□□□□ 0
RAPGEF1-201ENST00000372189 CCDC102BQ68D86 513 aa15.07■□□□□ 0
RAPGEF1-201ENST00000372189 CERS3Q8IU89 383 aa15.07■□□□□ 0
RAPGEF1-201ENST00000372189 LPIN2Q92539 896 aa15.07■□□□□ 0
RAPGEF1-201ENST00000372189 MYCBPQ99417 103 aaPredicted RBP15.07■□□□□ 0
RAPGEF1-201ENST00000372189 ZNF408Q9H9D4 720 aa15.07■□□□□ 0
RAPGEF1-201ENST00000372189 MTIF2P46199 727 aaKnown RBP15.07■□□□□ 0
RAPGEF1-201ENST00000372189 CARD10Q9BWT7 1032 aa15.07■□□□□ 0
RAPGEF1-201ENST00000372189 CKAP4Q07065 602 aaKnown RBP15.07■□□□□ 0
RAPGEF1-201ENST00000372189 TAOK3Q9H2K8 898 aa15.07■□□□□ 0
RAPGEF1-201ENST00000372189 ARFGAP3Q9NP61 516 aa15.07■□□□□ 0
RAPGEF1-201ENST00000372189 SHROOM2Q13796 1616 aa15.07■□□□□ 0
RAPGEF1-201ENST00000372189 HLTFQ14527 1009 aaKnown RBP eCLIP15.07■□□□□ 0
RAPGEF1-201ENST00000372189 ZNF335Q9H4Z2 1342 aaPredicted RBP15.07■□□□□ 0
RAPGEF1-201ENST00000372189 CALML3P27482 149 aa15.06■□□□□ 0
RAPGEF1-201ENST00000372189 CCDC186Q7Z3E2 898 aa15.06■□□□□ 0
RAPGEF1-201ENST00000372189 SUCLG2Q96I99 432 aa15.06■□□□□ 0
RAPGEF1-201ENST00000372189 SRRTQ9BXP5 876 aaKnown RBP15.06■□□□□ 0
RAPGEF1-201ENST00000372189 EXOC1Q9NV70 894 aa15.06■□□□□ 0
RAPGEF1-201ENST00000372189 CNPY2Q9Y2B0 182 aa15.06■□□□□ 0
RAPGEF1-201ENST00000372189 TCERG1LQ5VWI1 586 aa15.06■□□□□ 0
RAPGEF1-201ENST00000372189 FAM196AQ6ZSG2 479 aa15.06■□□□□ 0
RAPGEF1-201ENST00000372189 DRC1Q96MC2 740 aa15.06■□□□□ 0
RAPGEF1-201ENST00000372189 PARP1P09874 1014 aaKnown RBP15.06■□□□□ 0
RAPGEF1-201ENST00000372189 TCIRG1Q13488 830 aa15.06■□□□□ 0
RAPGEF1-201ENST00000372189 SPECC1Q5M775 1068 aa15.06■□□□□ 0
RAPGEF1-201ENST00000372189 HSF2BPO75031 334 aa15.06■□□□□ 0
RAPGEF1-201ENST00000372189 CREB3L3Q68CJ9 461 aa15.06■□□□□ 0
RAPGEF1-201ENST00000372189 SPECC1LQ69YQ0 1117 aa15.06■□□□□ 0
RAPGEF1-201ENST00000372189 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.06■□□□□ 0
RAPGEF1-201ENST00000372189 CEP83Q9Y592 693 aa15.06■□□□□ 0
RAPGEF1-201ENST00000372189 A0A1B0GUA9 196 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms