RNA–Protein interactions for RNA: ENST00000367047.5

CD46-209, Transcript of CD46 molecule, humanhuman

TSL 5 BASIC

Gene CD46, Length 3,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-209ENST00000367047 XAGE2Q96GT9 111 aa9.6□□□□□ -0.87
CD46-209ENST00000367047 KIF5CO60282 957 aa9.6□□□□□ -0.87
CD46-209ENST00000367047 AARSP49588 968 aaKnown RBP eCLIP9.6□□□□□ -0.87
CD46-209ENST00000367047 PPFIA1Q13136 1202 aa9.6□□□□□ -0.87
CD46-209ENST00000367047 KCNB1Q14721 858 aa9.6□□□□□ -0.87
CD46-209ENST00000367047 CNTROBQ8N137 903 aa9.6□□□□□ -0.87
CD46-209ENST00000367047 USP28Q96RU2 1077 aa9.6□□□□□ -0.87
CD46-209ENST00000367047 CDC42BPAQ5VT25 1732 aa9.6□□□□□ -0.87
CD46-209ENST00000367047 CLSTN1O94985 981 aa9.59□□□□□ -0.87
CD46-209ENST00000367047 SNUPNO95149 360 aaKnown RBP9.59□□□□□ -0.87
CD46-209ENST00000367047 VSTM4Q8IW00 320 aa9.59□□□□□ -0.87
CD46-209ENST00000367047 SPDYE1Q8NFV5 336 aaPredicted RBP9.59□□□□□ -0.87
CD46-209ENST00000367047 RCOR1Q9UKL0 485 aa9.59□□□□□ -0.87
CD46-209ENST00000367047 CBFA2T2O43439 604 aa9.59□□□□□ -0.87
CD46-209ENST00000367047 ZEB2O60315 1214 aa9.59□□□□□ -0.87
CD46-209ENST00000367047 GIGYF1O75420 1035 aaPredicted RBP9.59□□□□□ -0.87
CD46-209ENST00000367047 SLC3A2P08195 630 aaKnown RBP9.59□□□□□ -0.87
CD46-209ENST00000367047 TRAF1Q13077 416 aa9.59□□□□□ -0.87
CD46-209ENST00000367047 SNCBQ16143 134 aa9.59□□□□□ -0.87
CD46-209ENST00000367047 SAAL1Q96ER3 474 aa9.59□□□□□ -0.87
CD46-209ENST00000367047 FAM210AQ96ND0 272 aa9.59□□□□□ -0.87
CD46-209ENST00000367047 PAIP2Q9BPZ3 127 aaKnown RBP9.59□□□□□ -0.87
CD46-209ENST00000367047 HINFPQ9BQA5 517 aa9.59□□□□□ -0.87
CD46-209ENST00000367047 POLD4Q9HCU8 107 aa9.59□□□□□ -0.87
CD46-209ENST00000367047 ARHGAP25P42331 645 aa9.59□□□□□ -0.87
CD46-209ENST00000367047 RPS6KA3P51812 740 aa9.59□□□□□ -0.87
CD46-209ENST00000367047 SMTNP53814 917 aa9.59□□□□□ -0.87
CD46-209ENST00000367047 TM6SF1Q9BZW5 370 aa9.59□□□□□ -0.87
CD46-209ENST00000367047 SLC40A1Q9NP59 571 aa9.59□□□□□ -0.87
CD46-209ENST00000367047 RAPGEF6Q8TEU7 1601 aa9.58□□□□□ -0.88
CD46-209ENST00000367047 CTAGE9A4FU28 777 aa9.58□□□□□ -0.88
CD46-209ENST00000367047 STX10O60499 249 aa9.58□□□□□ -0.88
CD46-209ENST00000367047 NDUFA8P51970 172 aa9.58□□□□□ -0.88
CD46-209ENST00000367047 BLOC1S2Q6QNY1 142 aa9.58□□□□□ -0.88
CD46-209ENST00000367047 GSPT2Q8IYD1 628 aaKnown RBP9.58□□□□□ -0.88
CD46-209ENST00000367047 VIPAS39Q9H9C1 493 aa9.58□□□□□ -0.88
CD46-209ENST00000367047 ARHGEF5Q12774 1597 aa9.58□□□□□ -0.88
CD46-209ENST00000367047 CCDC175P0C221 793 aa9.58□□□□□ -0.88
CD46-209ENST00000367047 CCT2P78371 535 aaKnown RBP9.58□□□□□ -0.88
CD46-209ENST00000367047 PDCLQ13371 301 aa9.58□□□□□ -0.88
CD46-209ENST00000367047 SF3B2Q13435 895 aaKnown RBP9.58□□□□□ -0.88
CD46-209ENST00000367047 NCAPH2Q6IBW4 605 aa9.58□□□□□ -0.88
CD46-209ENST00000367047 CCDC13Q8IYE1 715 aa9.58□□□□□ -0.88
CD46-209ENST00000367047 CCDC148Q8NFR7 591 aa9.58□□□□□ -0.88
CD46-209ENST00000367047 CCDC114Q96M63 670 aa9.58□□□□□ -0.88
CD46-209ENST00000367047 GRIN2DO15399 1336 aa9.58□□□□□ -0.88
CD46-209ENST00000367047 EIF2S2P20042 333 aaKnown RBP9.57□□□□□ -0.88
CD46-209ENST00000367047 ADD1P35611 737 aaKnown RBP9.57□□□□□ -0.88
CD46-209ENST00000367047 GUCY1B3Q02153 619 aa9.57□□□□□ -0.88
CD46-209ENST00000367047 THEMIS2Q5TEJ8 643 aa9.57□□□□□ -0.88
CD46-209ENST00000367047 CREB3L3Q68CJ9 461 aa9.57□□□□□ -0.88
CD46-209ENST00000367047 G2E3Q7L622 706 aa9.57□□□□□ -0.88
CD46-209ENST00000367047 FMR1NBQ8N0W7 255 aaPredicted RBP9.57□□□□□ -0.88
CD46-209ENST00000367047 COG1Q8WTW3 980 aa9.57□□□□□ -0.88
CD46-209ENST00000367047 LMBR1Q8WVP7 490 aa9.57□□□□□ -0.88
CD46-209ENST00000367047 MRPS27Q92552 414 aaKnown RBP9.57□□□□□ -0.88
CD46-209ENST00000367047 G3BP2Q9UN86 482 aaKnown RBP9.57□□□□□ -0.88
CD46-209ENST00000367047 RBM8AQ9Y5S9 174 aaKnown RBP9.57□□□□□ -0.88
CD46-209ENST00000367047 SOWAHDA6NJG2 315 aa9.57□□□□□ -0.88
CD46-209ENST00000367047 FYB1O15117 783 aa9.57□□□□□ -0.88
CD46-209ENST00000367047 PFKFB2O60825 505 aa9.57□□□□□ -0.88
CD46-209ENST00000367047 RASSF9O75901 435 aa9.57□□□□□ -0.88
CD46-209ENST00000367047 A1BGP04217 495 aa9.57□□□□□ -0.88
CD46-209ENST00000367047 NLRP12P59046 1061 aa9.57□□□□□ -0.88
CD46-209ENST00000367047 IFT88Q13099 833 aa9.57□□□□□ -0.88
CD46-209ENST00000367047 SF3A1Q15459 793 aaKnown RBP9.57□□□□□ -0.88
CD46-209ENST00000367047 PARP9Q8IXQ6 854 aa9.57□□□□□ -0.88
CD46-209ENST00000367047 SLC35F6Q8N357 371 aa9.57□□□□□ -0.88
CD46-209ENST00000367047 BPIFA3Q9BQP9 254 aa9.57□□□□□ -0.88
CD46-209ENST00000367047 HSD3B7Q9H2F3 369 aa9.57□□□□□ -0.88
CD46-209ENST00000367047 GOLGA6BA6NDN3 693 aa9.57□□□□□ -0.88
CD46-209ENST00000367047 AGPSO00116 658 aa9.57□□□□□ -0.88
CD46-209ENST00000367047 SURF6O75683 361 aaKnown RBP9.57□□□□□ -0.88
CD46-209ENST00000367047 TUBBP07437 444 aa9.57□□□□□ -0.88
CD46-209ENST00000367047 PECAM1P16284 738 aaPredicted RBP9.57□□□□□ -0.88
CD46-209ENST00000367047 PSMA5P28066 241 aa9.57□□□□□ -0.88
CD46-209ENST00000367047 ATP1A2P50993 1020 aa9.57□□□□□ -0.88
CD46-209ENST00000367047 PIP4K2BP78356 416 aa9.57□□□□□ -0.88
CD46-209ENST00000367047 CCDC181Q5TID7 509 aa9.57□□□□□ -0.88
CD46-209ENST00000367047 PI4K2BQ8TCG2 481 aa9.57□□□□□ -0.88
CD46-209ENST00000367047 RUFY2Q8WXA3 655 aa9.57□□□□□ -0.88
CD46-209ENST00000367047 RSRC1Q96IZ7 334 aaKnown RBP9.57□□□□□ -0.88
CD46-209ENST00000367047 CDC5LQ99459 802 aaKnown RBP9.57□□□□□ -0.88
CD46-209ENST00000367047 PCDHA7Q9UN72 937 aa9.57□□□□□ -0.88
CD46-209ENST00000367047 NSD2O96028 1365 aa9.56□□□□□ -0.88
CD46-209ENST00000367047 CDC25CP30307 473 aa9.56□□□□□ -0.88
CD46-209ENST00000367047 TUBB4BP68371 445 aa9.56□□□□□ -0.88
CD46-209ENST00000367047 ATP8B2P98198 1209 aa9.56□□□□□ -0.88
CD46-209ENST00000367047 ICA1Q05084 483 aa9.56□□□□□ -0.88
CD46-209ENST00000367047 MYSM1Q5VVJ2 828 aa9.56□□□□□ -0.88
CD46-209ENST00000367047 FAM228AQ86W67 206 aa9.56□□□□□ -0.88
CD46-209ENST00000367047 RPUSD2Q8IZ73 545 aaKnown RBP9.56□□□□□ -0.88
CD46-209ENST00000367047 TC2NQ8N9U0 490 aa9.56□□□□□ -0.88
CD46-209ENST00000367047 C3orf20Q8ND61 904 aa9.56□□□□□ -0.88
CD46-209ENST00000367047 TBC1D31Q96DN5 1066 aa9.56□□□□□ -0.88
CD46-209ENST00000367047 VCPKMTQ9H867 229 aa9.56□□□□□ -0.88
CD46-209ENST00000367047 HDGFP51858 240 aaKnown RBP9.56□□□□□ -0.88
CD46-209ENST00000367047 NECTIN1Q15223 517 aa9.56□□□□□ -0.88
CD46-209ENST00000367047 ANKRD1Q15327 319 aa9.56□□□□□ -0.88
CD46-209ENST00000367047 ACCSLQ4AC99 568 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms