RNA–Protein interactions for RNA: ENST00000359454.10

CCDC196-201, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,083 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-201ENST00000359454 PSMD14O00487 310 aa8.26□□□□□ -1.09
CCDC196-201ENST00000359454 ACTN4O43707 911 aaKnown RBP8.26□□□□□ -1.09
CCDC196-201ENST00000359454 NDUFV2P19404 249 aa8.26□□□□□ -1.09
CCDC196-201ENST00000359454 KIF23Q02241 960 aaPredicted RBP8.26□□□□□ -1.09
CCDC196-201ENST00000359454 AIMP1Q12904 312 aaKnown RBP8.26□□□□□ -1.09
CCDC196-201ENST00000359454 TBC1D10BQ4KMP7 808 aaPredicted RBP8.26□□□□□ -1.09
CCDC196-201ENST00000359454 RSBN1LQ6PCB5 846 aaPredicted RBP8.26□□□□□ -1.09
CCDC196-201ENST00000359454 XAGE3Q8WTP9 111 aa8.26□□□□□ -1.09
CCDC196-201ENST00000359454 EYA3Q99504 573 aa8.26□□□□□ -1.09
CCDC196-201ENST00000359454 NSFL1CQ9UNZ2 370 aaKnown RBP8.26□□□□□ -1.09
CCDC196-201ENST00000359454 DUOX1Q9NRD9 1551 aa8.26□□□□□ -1.09
CCDC196-201ENST00000359454 ADM5C9JUS6 153 aa8.25□□□□□ -1.09
CCDC196-201ENST00000359454 C6orf229H3BNL8 230 aa8.25□□□□□ -1.09
CCDC196-201ENST00000359454 SPTLC1O15269 473 aa8.25□□□□□ -1.09
CCDC196-201ENST00000359454 ZNF157P51786 506 aaPredicted RBP8.25□□□□□ -1.09
CCDC196-201ENST00000359454 PTPN5P54829 565 aa8.25□□□□□ -1.09
CCDC196-201ENST00000359454 RIPK4P57078 832 aa8.25□□□□□ -1.09
CCDC196-201ENST00000359454 LMOD3Q0VAK6 560 aa8.25□□□□□ -1.09
CCDC196-201ENST00000359454 SF3B3Q15393 1217 aaKnown RBP8.25□□□□□ -1.09
CCDC196-201ENST00000359454 DLK2Q6UY11 383 aa8.25□□□□□ -1.09
CCDC196-201ENST00000359454 SPNS2Q8IVW8 549 aa8.25□□□□□ -1.09
CCDC196-201ENST00000359454 DBNDD1Q9H9R9 158 aa8.25□□□□□ -1.09
CCDC196-201ENST00000359454 RNF186Q9NXI6 227 aa8.25□□□□□ -1.09
CCDC196-201ENST00000359454 LIMD1Q9UGP4 676 aa8.25□□□□□ -1.09
CCDC196-201ENST00000359454 LRRC37AA6NMS7 1700 aa8.25□□□□□ -1.09
CCDC196-201ENST00000359454 ECE2O60344 883 aa8.24□□□□□ -1.09
CCDC196-201ENST00000359454 TRPA1O75762 1119 aa8.24□□□□□ -1.09
CCDC196-201ENST00000359454 EGFRP00533 1210 aa8.24□□□□□ -1.09
CCDC196-201ENST00000359454 GJA5P36382 358 aa8.24□□□□□ -1.09
CCDC196-201ENST00000359454 GPSM2P81274 684 aa8.24□□□□□ -1.09
CCDC196-201ENST00000359454 KIF4BQ2VIQ3 1234 aa8.24□□□□□ -1.09
CCDC196-201ENST00000359454 PROCA1Q8NCQ7 364 aaPredicted RBP8.24□□□□□ -1.09
CCDC196-201ENST00000359454 CELF1Q92879 486 aaKnown RBP8.24□□□□□ -1.09
CCDC196-201ENST00000359454 POLLQ9UGP5 575 aa8.24□□□□□ -1.09
CCDC196-201ENST00000359454 GTF3C3Q9Y5Q9 886 aa8.24□□□□□ -1.09
CCDC196-201ENST00000359454 RTL9Q8NET4 1388 aa8.23□□□□□ -1.09
CCDC196-201ENST00000359454 VIL1P09327 827 aaKnown RBP8.23□□□□□ -1.09
CCDC196-201ENST00000359454 FDX1P10109 184 aa8.23□□□□□ -1.09
CCDC196-201ENST00000359454 SOX10P56693 466 aa8.23□□□□□ -1.09
CCDC196-201ENST00000359454 GUCA2AQ02747 115 aa8.23□□□□□ -1.09
CCDC196-201ENST00000359454 CSPP1Q1MSJ5 1256 aa8.23□□□□□ -1.09
CCDC196-201ENST00000359454 CTU1Q7Z7A3 348 aaKnown RBP8.23□□□□□ -1.09
CCDC196-201ENST00000359454 PLBD2Q8NHP8 589 aa8.23□□□□□ -1.09
CCDC196-201ENST00000359454 HLA-CQ95604 372 aa8.23□□□□□ -1.09
CCDC196-201ENST00000359454 RNF166Q96A37 237 aaPredicted RBP8.23□□□□□ -1.09
CCDC196-201ENST00000359454 FAM89AQ96GI7 184 aa8.23□□□□□ -1.09
CCDC196-201ENST00000359454 CSRNP1Q96S65 589 aa8.23□□□□□ -1.09
CCDC196-201ENST00000359454 ISCA1Q9BUE6 129 aa8.23□□□□□ -1.09
CCDC196-201ENST00000359454 ZC3H12CQ9C0D7 883 aaKnown RBP8.23□□□□□ -1.09
CCDC196-201ENST00000359454 PCDHB3Q9Y5E6 796 aa8.23□□□□□ -1.09
CCDC196-201ENST00000359454 TMPOP42166 694 aaKnown RBP8.22□□□□□ -1.09
CCDC196-201ENST00000359454 RPS8P62241 208 aaKnown RBP8.22□□□□□ -1.09
CCDC196-201ENST00000359454 FKBP1BP68106 108 aa8.22□□□□□ -1.09
CCDC196-201ENST00000359454 TUSC1Q2TAM9 212 aa8.22□□□□□ -1.09
CCDC196-201ENST00000359454 PUS10Q3MIT2 529 aaKnown RBP8.22□□□□□ -1.09
CCDC196-201ENST00000359454 NYAP1Q6ZVC0 841 aa8.22□□□□□ -1.09
CCDC196-201ENST00000359454 TBC1D16Q8TBP0 767 aa8.22□□□□□ -1.09
CCDC196-201ENST00000359454 CDCA5Q96FF9 252 aa8.22□□□□□ -1.09
CCDC196-201ENST00000359454 KCNQ5Q9NR82 932 aa8.22□□□□□ -1.09
CCDC196-201ENST00000359454 GGA3Q9NZ52 723 aa8.22□□□□□ -1.09
CCDC196-201ENST00000359454 CHPF2Q9P2E5 772 aa8.22□□□□□ -1.09
CCDC196-201ENST00000359454 DDX60Q8IY21 1712 aaKnown RBP8.22□□□□□ -1.09
CCDC196-201ENST00000359454 TAF1P21675 1872 aa8.21□□□□□ -1.09
CCDC196-201ENST00000359454 ATP5J2-PTCD1G3V325 749 aa8.21□□□□□ -1.1
CCDC196-201ENST00000359454 CHL1O00533 1208 aa8.21□□□□□ -1.1
CCDC196-201ENST00000359454 IRS4O14654 1257 aaPredicted RBP8.21□□□□□ -1.1
CCDC196-201ENST00000359454 HOXB7P09629 217 aa8.21□□□□□ -1.1
CCDC196-201ENST00000359454 HSP90B1P14625 803 aaKnown RBP8.21□□□□□ -1.1
CCDC196-201ENST00000359454 ZNF280AP59817 542 aaPredicted RBP8.21□□□□□ -1.1
CCDC196-201ENST00000359454 TRIM28Q13263 835 aaKnown RBP8.21□□□□□ -1.1
CCDC196-201ENST00000359454 PKN2Q16513 984 aaKnown RBP8.21□□□□□ -1.1
CCDC196-201ENST00000359454 MORN1Q5T089 497 aa8.21□□□□□ -1.1
CCDC196-201ENST00000359454 HDGFL1Q5TGJ6 251 aa8.21□□□□□ -1.1
CCDC196-201ENST00000359454 PRPF38BQ5VTL8 546 aaKnown RBP8.21□□□□□ -1.1
CCDC196-201ENST00000359454 RASAL3Q86YV0 1011 aa8.21□□□□□ -1.1
CCDC196-201ENST00000359454 AGBL3Q8NEM8 1001 aa8.21□□□□□ -1.1
CCDC196-201ENST00000359454 ZNF428Q96B54 188 aa8.21□□□□□ -1.1
CCDC196-201ENST00000359454 PKNOX2Q96KN3 472 aa8.21□□□□□ -1.1
CCDC196-201ENST00000359454 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.21□□□□□ -1.1
CCDC196-201ENST00000359454 DBF4Q9UBU7 674 aaPredicted RBP8.21□□□□□ -1.1
CCDC196-201ENST00000359454 ZNF609O15014 1411 aa8.2□□□□□ -1.1
CCDC196-201ENST00000359454 UFL1O94874 794 aa8.2□□□□□ -1.1
CCDC196-201ENST00000359454 SCARF1Q14162 830 aa8.2□□□□□ -1.1
CCDC196-201ENST00000359454 KRT24Q2M2I5 525 aa8.2□□□□□ -1.1
CCDC196-201ENST00000359454 ANGEL2Q5VTE6 544 aaKnown RBP8.2□□□□□ -1.1
CCDC196-201ENST00000359454 HYPKQ9NX55 129 aa8.2□□□□□ -1.1
CCDC196-201ENST00000359454 ANKIB1Q9P2G1 1089 aa8.2□□□□□ -1.1
CCDC196-201ENST00000359454 GGA1Q9UJY5 639 aa8.2□□□□□ -1.1
CCDC196-201ENST00000359454 PCDHB15Q9Y5E8 787 aa8.2□□□□□ -1.1
CCDC196-201ENST00000359454 AKAP11Q9UKA4 1901 aa8.2□□□□□ -1.1
CCDC196-201ENST00000359454 ASTN2O75129 1339 aaPredicted RBP8.2□□□□□ -1.1
CCDC196-201ENST00000359454 PITPNM2Q9BZ72 1349 aa8.2□□□□□ -1.1
CCDC196-201ENST00000359454 POLR2AP24928 1970 aaKnown RBP8.19□□□□□ -1.1
CCDC196-201ENST00000359454 USP17L8P0C7I0 530 aa8.19□□□□□ -1.1
CCDC196-201ENST00000359454 RTL5Q5HYW3 569 aaPredicted RBP8.19□□□□□ -1.1
CCDC196-201ENST00000359454 ZBTB38Q8NAP3 1195 aaPredicted RBP8.19□□□□□ -1.1
CCDC196-201ENST00000359454 MYOZ2Q9NPC6 264 aa8.19□□□□□ -1.1
CCDC196-201ENST00000359454 HDAC9Q9UKV0 1011 aa8.19□□□□□ -1.1
CCDC196-201ENST00000359454 PCDHGC3Q9UN70 934 aa8.19□□□□□ -1.1
CCDC196-201ENST00000359454 SLC27A5Q9Y2P5 690 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms