RNA–Protein interactions for RNA: ENST00000358273.8

NF1-202, Transcript of neurofibromin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NF1, Length 12,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-202ENST00000358273 SDCCAG8Q86SQ7 713 aaPredicted RBP7.82□□□□□ -1.16
NF1-202ENST00000358273 HIP1RO75146 1068 aa7.82□□□□□ -1.16
NF1-202ENST00000358273 CDKL5O76039 1030 aa7.82□□□□□ -1.16
NF1-202ENST00000358273 TCP11Q8WWU5 503 aa7.82□□□□□ -1.16
NF1-202ENST00000358273 H3BQF6 201 aa7.82□□□□□ -1.16
NF1-202ENST00000358273 SAFBQ15424 915 aaKnown RBP eCLIP7.82□□□□□ -1.16
NF1-202ENST00000358273 DIAPH1O60610 1272 aaKnown RBP7.82□□□□□ -1.16
NF1-202ENST00000358273 ZNF189O75820 626 aaPredicted RBP7.82□□□□□ -1.16
NF1-202ENST00000358273 CCNHP51946 323 aaPredicted RBP7.82□□□□□ -1.16
NF1-202ENST00000358273 WDR75Q8IWA0 830 aaKnown RBP7.82□□□□□ -1.16
NF1-202ENST00000358273 ZNF446Q9NWS9 450 aa7.82□□□□□ -1.16
NF1-202ENST00000358273 C9orf84Q5VXU9 1444 aa7.82□□□□□ -1.16
NF1-202ENST00000358273 PSDA5PKW4 1024 aaPredicted RBP7.82□□□□□ -1.16
NF1-202ENST00000358273 SGSM2O43147 1006 aa7.82□□□□□ -1.16
NF1-202ENST00000358273 RBM5P52756 815 aaKnown RBP eCLIP7.82□□□□□ -1.16
NF1-202ENST00000358273 CASP8Q14790 479 aa7.82□□□□□ -1.16
NF1-202ENST00000358273 TPP2P29144 1249 aaPredicted RBP7.82□□□□□ -1.16
NF1-202ENST00000358273 TRIM74Q86UV6 250 aa7.82□□□□□ -1.16
NF1-202ENST00000358273 TRIM73Q86UV7 250 aa7.82□□□□□ -1.16
NF1-202ENST00000358273 FAM167BQ9BTA0 163 aa7.82□□□□□ -1.16
NF1-202ENST00000358273 SPINK5Q9NQ38 1064 aaPredicted RBP7.82□□□□□ -1.16
NF1-202ENST00000358273 RHBDL2Q9NX52 303 aa7.82□□□□□ -1.16
NF1-202ENST00000358273 TADA3O75528 432 aa7.82□□□□□ -1.16
NF1-202ENST00000358273 SND1Q7KZF4 910 aaKnown RBP eCLIP7.82□□□□□ -1.16
NF1-202ENST00000358273 PPP1R1BQ9UD71 204 aaPredicted RBP7.82□□□□□ -1.16
NF1-202ENST00000358273 TXNDC9O14530 226 aa7.82□□□□□ -1.16
NF1-202ENST00000358273 SKAP2O75563 359 aaPredicted RBP7.82□□□□□ -1.16
NF1-202ENST00000358273 ZFXP17010 805 aaPredicted RBP7.82□□□□□ -1.16
NF1-202ENST00000358273 ADCY2Q08462 1091 aa7.82□□□□□ -1.16
NF1-202ENST00000358273 TMEM165Q9HC07 324 aa7.82□□□□□ -1.16
NF1-202ENST00000358273 DMRT2Q9Y5R5 561 aa7.82□□□□□ -1.16
NF1-202ENST00000358273 PDHA1P08559 390 aa7.81□□□□□ -1.16
NF1-202ENST00000358273 NLRP5P59047 1200 aa7.81□□□□□ -1.16
NF1-202ENST00000358273 PPANQ9NQ55 473 aaKnown RBP7.81□□□□□ -1.16
NF1-202ENST00000358273 UBTFL1P0CB47 393 aaPredicted RBP7.81□□□□□ -1.16
NF1-202ENST00000358273 IDEP14735 1019 aa7.81□□□□□ -1.16
NF1-202ENST00000358273 PPP1R7Q15435 360 aa7.81□□□□□ -1.16
NF1-202ENST00000358273 ALDH1L2Q3SY69 923 aa7.81□□□□□ -1.16
NF1-202ENST00000358273 PALMDQ9NP74 551 aa7.81□□□□□ -1.16
NF1-202ENST00000358273 CHD4Q14839 1912 aa7.81□□□□□ -1.16
NF1-202ENST00000358273 NOP53Q9NZM5 478 aaKnown RBP7.81□□□□□ -1.16
NF1-202ENST00000358273 ZNF711Q9Y462 761 aa7.81□□□□□ -1.16
NF1-202ENST00000358273 KCNV2Q8TDN2 545 aa7.81□□□□□ -1.16
NF1-202ENST00000358273 OTUD7AQ8TE49 926 aaPredicted RBP7.81□□□□□ -1.16
NF1-202ENST00000358273 ESYT1Q9BSJ8 1104 aa7.81□□□□□ -1.16
NF1-202ENST00000358273 LAMC3Q9Y6N6 1575 aa7.81□□□□□ -1.16
NF1-202ENST00000358273 GNAI2P04899 355 aa7.81□□□□□ -1.16
NF1-202ENST00000358273 FANCCQ00597 558 aa7.81□□□□□ -1.16
NF1-202ENST00000358273 NECAB1Q8N987 351 aa7.81□□□□□ -1.16
NF1-202ENST00000358273 PSME1Q06323 249 aa7.81□□□□□ -1.16
NF1-202ENST00000358273 PARD3BQ8TEW8 1205 aa7.81□□□□□ -1.16
NF1-202ENST00000358273 KIAA0586Q9BVV6 1533 aa7.81□□□□□ -1.16
NF1-202ENST00000358273 HIP1O00291 1037 aa7.81□□□□□ -1.16
NF1-202ENST00000358273 GBP7Q8N8V2 638 aaPredicted RBP7.81□□□□□ -1.16
NF1-202ENST00000358273 LEO1Q8WVC0 666 aaPredicted RBP7.81□□□□□ -1.16
NF1-202ENST00000358273 GPIHBP1Q8IV16 184 aa7.81□□□□□ -1.16
NF1-202ENST00000358273 TAF11Q15544 211 aa7.81□□□□□ -1.16
NF1-202ENST00000358273 SYCP3Q8IZU3 236 aa7.81□□□□□ -1.16
NF1-202ENST00000358273 PAIP2BQ9ULR5 123 aaKnown RBP7.81□□□□□ -1.16
NF1-202ENST00000358273 SLC4A7Q9Y6M7 1214 aa7.81□□□□□ -1.16
NF1-202ENST00000358273 KCTD16Q68DU8 428 aa7.8□□□□□ -1.16
NF1-202ENST00000358273 TTC14Q96N46 770 aa7.8□□□□□ -1.16
NF1-202ENST00000358273 TSPYL2Q9H2G4 693 aaPredicted RBP7.8□□□□□ -1.16
NF1-202ENST00000358273 ZSCAN16Q9H4T2 348 aaPredicted RBP7.8□□□□□ -1.16
NF1-202ENST00000358273 TRIML1Q8N9V2 468 aa7.8□□□□□ -1.16
NF1-202ENST00000358273 SPDYE1Q8NFV5 336 aaPredicted RBP7.8□□□□□ -1.16
NF1-202ENST00000358273 ACTR5Q9H9F9 607 aaPredicted RBP7.8□□□□□ -1.16
NF1-202ENST00000358273 ZNF644Q9H582 1327 aaPredicted RBP7.8□□□□□ -1.16
NF1-202ENST00000358273 ZBTB21Q9ULJ3 1066 aa7.8□□□□□ -1.16
NF1-202ENST00000358273 RASSF10A6NK89 507 aa7.8□□□□□ -1.16
NF1-202ENST00000358273 ARMC3Q5W041 872 aa7.8□□□□□ -1.16
NF1-202ENST00000358273 TRIM42Q8IWZ5 723 aa7.8□□□□□ -1.16
NF1-202ENST00000358273 RNF10Q8N5U6 811 aaKnown RBP7.8□□□□□ -1.16
NF1-202ENST00000358273 ESF1Q9H501 851 aaKnown RBP7.8□□□□□ -1.16
NF1-202ENST00000358273 AATFQ9NY61 560 aaKnown RBP eCLIP7.8□□□□□ -1.16
NF1-202ENST00000358273 SPAG17Q6Q759 2223 aa7.8□□□□□ -1.16
NF1-202ENST00000358273 RNF8O76064 485 aa7.8□□□□□ -1.16
NF1-202ENST00000358273 PLA2G4AP47712 749 aa7.8□□□□□ -1.16
NF1-202ENST00000358273 SH3BGRP55822 239 aaPredicted RBP7.8□□□□□ -1.16
NF1-202ENST00000358273 SCRN1Q12765 414 aa7.8□□□□□ -1.16
NF1-202ENST00000358273 CUL3Q13618 768 aa7.8□□□□□ -1.16
NF1-202ENST00000358273 C11orf57Q6ZUT1 292 aaPredicted RBP7.8□□□□□ -1.16
NF1-202ENST00000358273 SH3BP1Q9Y3L3 701 aa7.8□□□□□ -1.16
NF1-202ENST00000358273 CADPSQ9ULU8 1353 aa7.8□□□□□ -1.16
NF1-202ENST00000358273 GUCY1B3Q02153 619 aa7.8□□□□□ -1.16
NF1-202ENST00000358273 TWISTNBQ3B726 338 aaPredicted RBP7.8□□□□□ -1.16
NF1-202ENST00000358273 TRPM1Q7Z4N2 1603 aa7.8□□□□□ -1.16
NF1-202ENST00000358273 DDIT3P35638 169 aa7.8□□□□□ -1.16
NF1-202ENST00000358273 SEPT2Q15019 361 aa7.8□□□□□ -1.16
NF1-202ENST00000358273 UBLCP1Q8WVY7 318 aaPredicted RBP7.8□□□□□ -1.16
NF1-202ENST00000358273 STMN4Q9H169 189 aaPredicted RBP7.8□□□□□ -1.16
NF1-202ENST00000358273 HAUS2Q9NVX0 235 aa7.8□□□□□ -1.16
NF1-202ENST00000358273 RABGAP1Q9Y3P9 1069 aa7.8□□□□□ -1.16
NF1-202ENST00000358273 MSH6P52701 1360 aa7.8□□□□□ -1.16
NF1-202ENST00000358273 RNASE9P60153 205 aaKnown RBP7.8□□□□□ -1.16
NF1-202ENST00000358273 RAB11FIP4Q86YS3 637 aa7.8□□□□□ -1.16
NF1-202ENST00000358273 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.8□□□□□ -1.16
NF1-202ENST00000358273 KLHDC4Q8TBB5 520 aa7.8□□□□□ -1.16
NF1-202ENST00000358273 RGL1Q9NZL6 768 aa7.8□□□□□ -1.16
NF1-202ENST00000358273 TBC1D8O95759 1140 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms