RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 SLFN5Q08AF3 891 aa11.83□□□□□ -0.52
FXR1-202ENST00000357559 BZW2Q9Y6E2 419 aaKnown RBP11.83□□□□□ -0.52
FXR1-202ENST00000357559 STX10O60499 249 aa11.83□□□□□ -0.52
FXR1-202ENST00000357559 ZSCAN22P10073 491 aaPredicted RBP11.83□□□□□ -0.52
FXR1-202ENST00000357559 SYT10Q6XYQ8 523 aa11.83□□□□□ -0.52
FXR1-202ENST00000357559 C8orf37Q96NL8 207 aa11.83□□□□□ -0.52
FXR1-202ENST00000357559 PSMB7Q99436 277 aa11.83□□□□□ -0.52
FXR1-202ENST00000357559 NKIRAS1Q9NYS0 192 aa11.83□□□□□ -0.52
FXR1-202ENST00000357559 RABGAP1Q9Y3P9 1069 aa11.83□□□□□ -0.52
FXR1-202ENST00000357559 FYB2Q5VWT5 728 aa11.83□□□□□ -0.52
FXR1-202ENST00000357559 ECHDC1Q9NTX5 307 aa11.83□□□□□ -0.52
FXR1-202ENST00000357559 DBF4Q9UBU7 674 aaPredicted RBP11.83□□□□□ -0.52
FXR1-202ENST00000357559 CALCOCO2Q13137 446 aa11.83□□□□□ -0.52
FXR1-202ENST00000357559 GBP6Q6ZN66 633 aa11.83□□□□□ -0.52
FXR1-202ENST00000357559 HELBQ8NG08 1087 aaPredicted RBP11.83□□□□□ -0.52
FXR1-202ENST00000357559 WDR46O15213 610 aaKnown RBP11.83□□□□□ -0.52
FXR1-202ENST00000357559 MYCLP12524 364 aaPredicted RBP11.83□□□□□ -0.52
FXR1-202ENST00000357559 ZNF804AQ7Z570 1209 aa11.83□□□□□ -0.52
FXR1-202ENST00000357559 KRT19P08727 400 aa11.83□□□□□ -0.52
FXR1-202ENST00000357559 AMOTQ4VCS5 1084 aa11.83□□□□□ -0.52
FXR1-202ENST00000357559 NKTRP30414 1462 aaKnown RBP11.82□□□□□ -0.52
FXR1-202ENST00000357559 DCLK2Q8N568 766 aa11.82□□□□□ -0.52
FXR1-202ENST00000357559 FAM76AQ8TAV0 307 aa11.82□□□□□ -0.52
FXR1-202ENST00000357559 TOP2AP11388 1531 aaKnown RBP11.82□□□□□ -0.52
FXR1-202ENST00000357559 KRT83P78385 493 aa11.82□□□□□ -0.52
FXR1-202ENST00000357559 SPATA17Q96L03 361 aa11.82□□□□□ -0.52
FXR1-202ENST00000357559 CHPF2Q9P2E5 772 aa11.82□□□□□ -0.52
FXR1-202ENST00000357559 VWA3AA6NCI4 1184 aa11.82□□□□□ -0.52
FXR1-202ENST00000357559 GBP1P32455 592 aa11.82□□□□□ -0.52
FXR1-202ENST00000357559 RAD51AP2Q09MP3 1159 aa11.82□□□□□ -0.52
FXR1-202ENST00000357559 NBPF11Q86T75 865 aa11.82□□□□□ -0.52
FXR1-202ENST00000357559 JAKMIP2Q96AA8 810 aa11.82□□□□□ -0.52
FXR1-202ENST00000357559 VCX3BQ9H321 246 aa11.82□□□□□ -0.52
FXR1-202ENST00000357559 ZSCAN16Q9H4T2 348 aaPredicted RBP11.82□□□□□ -0.52
FXR1-202ENST00000357559 IFNKQ9P0W0 207 aa11.82□□□□□ -0.52
FXR1-202ENST00000357559 IL1RL1Q01638 556 aa11.82□□□□□ -0.52
FXR1-202ENST00000357559 TRPC3Q13507 836 aa11.82□□□□□ -0.52
FXR1-202ENST00000357559 HS2ST1Q7LGA3 356 aa11.82□□□□□ -0.52
FXR1-202ENST00000357559 LCA5Q86VQ0 697 aa11.82□□□□□ -0.52
FXR1-202ENST00000357559 UTP11Q9Y3A2 253 aaKnown RBP11.82□□□□□ -0.52
FXR1-202ENST00000357559 SLC8A3P57103 927 aa11.82□□□□□ -0.52
FXR1-202ENST00000357559 APOBRQ0VD83 1088 aa11.82□□□□□ -0.52
FXR1-202ENST00000357559 FCHSD1Q86WN1 690 aa11.82□□□□□ -0.52
FXR1-202ENST00000357559 CPSF2Q9P2I0 782 aaKnown RBP11.82□□□□□ -0.52
FXR1-202ENST00000357559 MTUS1Q9ULD2 1270 aa11.82□□□□□ -0.52
FXR1-202ENST00000357559 NOLC1Q14978 699 aaKnown RBP eCLIP11.81□□□□□ -0.52
FXR1-202ENST00000357559 SLC9C2Q5TAH2 1124 aa11.81□□□□□ -0.52
FXR1-202ENST00000357559 KRT79Q5XKE5 535 aa11.81□□□□□ -0.52
FXR1-202ENST00000357559 NXNQ6DKJ4 435 aa11.81□□□□□ -0.52
FXR1-202ENST00000357559 STK38LQ9Y2H1 464 aa11.81□□□□□ -0.52
FXR1-202ENST00000357559 PPFIBP2Q8ND30 876 aa11.81□□□□□ -0.52
FXR1-202ENST00000357559 SKA2Q8WVK7 121 aaPredicted RBP11.81□□□□□ -0.52
FXR1-202ENST00000357559 NIP7Q9Y221 180 aaKnown RBP eCLIP11.81□□□□□ -0.52
FXR1-202ENST00000357559 CADPSQ9ULU8 1353 aa11.81□□□□□ -0.52
FXR1-202ENST00000357559 CHMP6Q96FZ7 201 aa11.81□□□□□ -0.52
FXR1-202ENST00000357559 BAG1Q99933 345 aaPredicted RBP11.81□□□□□ -0.52
FXR1-202ENST00000357559 DACT1Q9NYF0 836 aa11.81□□□□□ -0.52
FXR1-202ENST00000357559 SWAP70Q9UH65 585 aa11.81□□□□□ -0.52
FXR1-202ENST00000357559 EPB41P11171 864 aaKnown RBP11.81□□□□□ -0.52
FXR1-202ENST00000357559 ZNF174Q15697 407 aa11.81□□□□□ -0.52
FXR1-202ENST00000357559 ERCC6LQ2NKX8 1250 aa11.81□□□□□ -0.52
FXR1-202ENST00000357559 GPHNQ9NQX3 736 aaPredicted RBP11.81□□□□□ -0.52
FXR1-202ENST00000357559 NCOA2Q15596 1464 aa11.81□□□□□ -0.52
FXR1-202ENST00000357559 FBLN1P23142 703 aa11.81□□□□□ -0.52
FXR1-202ENST00000357559 KCNG4Q8TDN1 519 aa11.81□□□□□ -0.52
FXR1-202ENST00000357559 RILPQ96NA2 401 aa11.81□□□□□ -0.52
FXR1-202ENST00000357559 BICDL2A1A5D9 508 aa11.81□□□□□ -0.52
FXR1-202ENST00000357559 RARSP54136 660 aaKnown RBP11.81□□□□□ -0.52
FXR1-202ENST00000357559 TMTC4Q5T4D3 741 aa11.81□□□□□ -0.52
FXR1-202ENST00000357559 DTHD1Q6ZMT9 781 aa11.81□□□□□ -0.52
FXR1-202ENST00000357559 MRPL46Q9H2W6 279 aaKnown RBP11.81□□□□□ -0.52
FXR1-202ENST00000357559 PTPDC1A2A3K4 754 aa11.81□□□□□ -0.52
FXR1-202ENST00000357559 PDCD7Q8N8D1 485 aaKnown RBP11.81□□□□□ -0.52
FXR1-202ENST00000357559 MCUR1Q96AQ8 359 aa11.81□□□□□ -0.52
FXR1-202ENST00000357559 ZNF853P0CG23 659 aa11.8□□□□□ -0.52
FXR1-202ENST00000357559 KIFAP3Q92845 792 aa11.8□□□□□ -0.52
FXR1-202ENST00000357559 SEPT10Q9P0V9 454 aa11.8□□□□□ -0.52
FXR1-202ENST00000357559 NOP56O00567 594 aaKnown RBP11.8□□□□□ -0.52
FXR1-202ENST00000357559 SLC39A6Q13433 755 aa11.8□□□□□ -0.52
FXR1-202ENST00000357559 USH1GQ495M9 461 aa11.8□□□□□ -0.52
FXR1-202ENST00000357559 CXorf38Q8TB03 319 aa11.8□□□□□ -0.52
FXR1-202ENST00000357559 CFTRP13569 1480 aa11.8□□□□□ -0.52
FXR1-202ENST00000357559 TBC1D8O95759 1140 aa11.8□□□□□ -0.52
FXR1-202ENST00000357559 SAT1P21673 171 aa11.8□□□□□ -0.52
FXR1-202ENST00000357559 LETM2Q2VYF4 491 aa11.8□□□□□ -0.52
FXR1-202ENST00000357559 GPR161Q8N6U8 529 aaKnown RBP11.8□□□□□ -0.52
FXR1-202ENST00000357559 TMX3Q96JJ7 454 aa11.8□□□□□ -0.52
FXR1-202ENST00000357559 TSGA10Q9BZW7 698 aa11.8□□□□□ -0.52
FXR1-202ENST00000357559 TTC30BQ8N4P2 665 aa11.8□□□□□ -0.52
FXR1-202ENST00000357559 FAM200AQ8TCP9 573 aa11.8□□□□□ -0.52
FXR1-202ENST00000357559 MRPS27Q92552 414 aaKnown RBP11.8□□□□□ -0.52
FXR1-202ENST00000357559 SUPT6HQ7KZ85 1726 aaKnown RBP11.8□□□□□ -0.52
FXR1-202ENST00000357559 STK10O94804 968 aaKnown RBP11.8□□□□□ -0.52
FXR1-202ENST00000357559 BEND3Q5T5X7 828 aa11.8□□□□□ -0.52
FXR1-202ENST00000357559 VAV2P52735 878 aa11.8□□□□□ -0.52
FXR1-202ENST00000357559 ZGPATQ8N5A5 531 aaKnown RBP11.8□□□□□ -0.52
FXR1-202ENST00000357559 SMIM24O75264 130 aa11.8□□□□□ -0.52
FXR1-202ENST00000357559 TRIM27P14373 513 aa11.8□□□□□ -0.52
FXR1-202ENST00000357559 CASP2P42575 452 aa11.8□□□□□ -0.52
FXR1-202ENST00000357559 CACNA2D3Q8IZS8 1091 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms