RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 INTS13Q9NVM9 706 aa13.98□□□□□ -0.17
SMARCAL1-201ENST00000357276 HPSEQ9Y251 543 aa13.98□□□□□ -0.17
SMARCAL1-201ENST00000357276 C5P01031 1676 aa13.98□□□□□ -0.17
SMARCAL1-201ENST00000357276 CCDC151A5D8V7 595 aa13.98□□□□□ -0.17
SMARCAL1-201ENST00000357276 H3BQF6 201 aa13.98□□□□□ -0.17
SMARCAL1-201ENST00000357276 UBASH3AP57075 661 aa13.98□□□□□ -0.17
SMARCAL1-201ENST00000357276 GUCY1B3Q02153 619 aa13.98□□□□□ -0.17
SMARCAL1-201ENST00000357276 EPHA10Q5JZY3 1008 aa13.98□□□□□ -0.17
SMARCAL1-201ENST00000357276 JAKMIP3Q5VZ66 844 aa13.98□□□□□ -0.17
SMARCAL1-201ENST00000357276 BRAPQ7Z569 592 aa13.98□□□□□ -0.17
SMARCAL1-201ENST00000357276 SRLQ86TD4 932 aa13.98□□□□□ -0.17
SMARCAL1-201ENST00000357276 SPEF2Q9C093 1822 aa13.97□□□□□ -0.17
SMARCAL1-201ENST00000357276 MROH7-TTC4A0A0A0MT08 1334 aa13.97□□□□□ -0.17
SMARCAL1-201ENST00000357276 BIN1O00499 593 aa13.97□□□□□ -0.17
SMARCAL1-201ENST00000357276 RPS6KA5O75582 802 aa13.97□□□□□ -0.17
SMARCAL1-201ENST00000357276 PFKFB1P16118 471 aa13.97□□□□□ -0.17
SMARCAL1-201ENST00000357276 PPP2R3AQ06190 1150 aa13.97□□□□□ -0.17
SMARCAL1-201ENST00000357276 ZRSR1Q15695 479 aaKnown RBP13.97□□□□□ -0.17
SMARCAL1-201ENST00000357276 MYSM1Q5VVJ2 828 aa13.97□□□□□ -0.17
SMARCAL1-201ENST00000357276 KBTBD3Q8NAB2 608 aa13.97□□□□□ -0.17
SMARCAL1-201ENST00000357276 PXDNQ92626 1479 aa13.97□□□□□ -0.17
SMARCAL1-201ENST00000357276 E7EWF7 191 aa13.97□□□□□ -0.17
SMARCAL1-201ENST00000357276 MYL5Q02045 173 aa13.97□□□□□ -0.17
SMARCAL1-201ENST00000357276 STK38Q15208 465 aa13.97□□□□□ -0.17
SMARCAL1-201ENST00000357276 NBPF6Q5VWK0 638 aa13.97□□□□□ -0.17
SMARCAL1-201ENST00000357276 NBPF4Q96M43 638 aa13.97□□□□□ -0.17
SMARCAL1-201ENST00000357276 HELLSQ9NRZ9 838 aa13.97□□□□□ -0.17
SMARCAL1-201ENST00000357276 CCDC191Q8NCU4 936 aa13.96□□□□□ -0.17
SMARCAL1-201ENST00000357276 AK7Q96M32 723 aa13.96□□□□□ -0.17
SMARCAL1-201ENST00000357276 CAMTA1Q9Y6Y1 1673 aa13.96□□□□□ -0.17
SMARCAL1-201ENST00000357276 STX10O60499 249 aa13.96□□□□□ -0.17
SMARCAL1-201ENST00000357276 TXLNAP40222 546 aa13.96□□□□□ -0.17
SMARCAL1-201ENST00000357276 USP5P45974 858 aa13.96□□□□□ -0.17
SMARCAL1-201ENST00000357276 PTPN12Q05209 780 aaKnown RBP13.96□□□□□ -0.17
SMARCAL1-201ENST00000357276 TEFQ10587 303 aa13.96□□□□□ -0.17
SMARCAL1-201ENST00000357276 BRD3Q15059 726 aa13.96□□□□□ -0.17
SMARCAL1-201ENST00000357276 FMNL2Q96PY5 1086 aa13.96□□□□□ -0.17
SMARCAL1-201ENST00000357276 DDX21Q9NR30 783 aaKnown RBP eCLIP13.96□□□□□ -0.17
SMARCAL1-201ENST00000357276 CWC15Q9P013 229 aaKnown RBP13.96□□□□□ -0.17
SMARCAL1-201ENST00000357276 CASQ1P31415 396 aa13.96□□□□□ -0.18
SMARCAL1-201ENST00000357276 ACTN2P35609 894 aa13.96□□□□□ -0.18
SMARCAL1-201ENST00000357276 LONRF2Q1L5Z9 754 aa13.96□□□□□ -0.18
SMARCAL1-201ENST00000357276 IP6K1Q92551 441 aa13.96□□□□□ -0.18
SMARCAL1-201ENST00000357276 LTV1Q96GA3 475 aaPredicted RBP13.96□□□□□ -0.18
SMARCAL1-201ENST00000357276 CCDC34Q96HJ3 373 aa13.96□□□□□ -0.18
SMARCAL1-201ENST00000357276 NDUFB9Q9Y6M9 179 aa13.96□□□□□ -0.18
SMARCAL1-201ENST00000357276 PLEKHG2Q9H7P9 1386 aa13.96□□□□□ -0.18
SMARCAL1-201ENST00000357276 PRAMEF22A3QJZ6 481 aa13.95□□□□□ -0.18
SMARCAL1-201ENST00000357276 NEURL1BA8MQ27 555 aa13.95□□□□□ -0.18
SMARCAL1-201ENST00000357276 TMEM232C9JQI7 657 aa13.95□□□□□ -0.18
SMARCAL1-201ENST00000357276 RNMTO43148 476 aaKnown RBP13.95□□□□□ -0.18
SMARCAL1-201ENST00000357276 WDHD1O75717 1129 aaPredicted RBP13.95□□□□□ -0.18
SMARCAL1-201ENST00000357276 RAB21Q9UL25 225 aa13.95□□□□□ -0.18
SMARCAL1-201ENST00000357276 AFDNP55196 1824 aaKnown RBP13.95□□□□□ -0.18
SMARCAL1-201ENST00000357276 A0A0G2JLW4 131 aa13.95□□□□□ -0.18
SMARCAL1-201ENST00000357276 TRIM66O15016 1216 aa13.95□□□□□ -0.18
SMARCAL1-201ENST00000357276 DDX58O95786 925 aaKnown RBP13.95□□□□□ -0.18
SMARCAL1-201ENST00000357276 TFCP2Q12800 502 aa13.95□□□□□ -0.18
SMARCAL1-201ENST00000357276 GCKRQ14397 625 aa13.95□□□□□ -0.18
SMARCAL1-201ENST00000357276 RABL6Q3YEC7 729 aaPredicted RBP13.95□□□□□ -0.18
SMARCAL1-201ENST00000357276 RSPH14Q9UHP6 348 aa13.95□□□□□ -0.18
SMARCAL1-201ENST00000357276 ECM29Q5VYK3 1845 aa13.95□□□□□ -0.18
SMARCAL1-201ENST00000357276 ANO1Q5XXA6 986 aa13.95□□□□□ -0.18
SMARCAL1-201ENST00000357276 TC2NQ8N9U0 490 aa13.95□□□□□ -0.18
SMARCAL1-201ENST00000357276 GOLGA1Q92805 767 aa13.95□□□□□ -0.18
SMARCAL1-201ENST00000357276 KIF28PB7ZC32 967 aa13.94□□□□□ -0.18
SMARCAL1-201ENST00000357276 TOP1P11387 765 aaKnown RBP13.94□□□□□ -0.18
SMARCAL1-201ENST00000357276 HSPA2P54652 639 aa13.94□□□□□ -0.18
SMARCAL1-201ENST00000357276 SLC39A14Q15043 492 aa13.94□□□□□ -0.18
SMARCAL1-201ENST00000357276 ZMYM1Q5SVZ6 1142 aa13.94□□□□□ -0.18
SMARCAL1-201ENST00000357276 GOLGA8FQ08AF8 430 aa13.94□□□□□ -0.18
SMARCAL1-201ENST00000357276 GOLGA8DPQ0D2H9 430 aa13.94□□□□□ -0.18
SMARCAL1-201ENST00000357276 SF3A1Q15459 793 aaKnown RBP13.94□□□□□ -0.18
SMARCAL1-201ENST00000357276 BEND6Q5SZJ8 279 aaPredicted RBP13.94□□□□□ -0.18
SMARCAL1-201ENST00000357276 CADPS2Q86UW7 1296 aa13.94□□□□□ -0.18
SMARCAL1-201ENST00000357276 PLCD3Q8N3E9 789 aa13.94□□□□□ -0.18
SMARCAL1-201ENST00000357276 BAG1Q99933 345 aaPredicted RBP13.94□□□□□ -0.18
SMARCAL1-201ENST00000357276 SERPINC1P01008 464 aa13.93□□□□□ -0.18
SMARCAL1-201ENST00000357276 HSPD1P10809 573 aaKnown RBP13.93□□□□□ -0.18
SMARCAL1-201ENST00000357276 GNG11P61952 73 aa13.93□□□□□ -0.18
SMARCAL1-201ENST00000357276 CFAP100Q494V2 611 aa13.93□□□□□ -0.18
SMARCAL1-201ENST00000357276 ELOA2Q8IYF1 753 aaPredicted RBP13.93□□□□□ -0.18
SMARCAL1-201ENST00000357276 MSANTD4Q8NCY6 345 aa13.93□□□□□ -0.18
SMARCAL1-201ENST00000357276 DBNDD2Q9BQY9 259 aa13.93□□□□□ -0.18
SMARCAL1-201ENST00000357276 RRP15Q9Y3B9 282 aaKnown RBP13.93□□□□□ -0.18
SMARCAL1-201ENST00000357276 GYS2P54840 703 aa13.93□□□□□ -0.18
SMARCAL1-201ENST00000357276 KIF23Q02241 960 aaPredicted RBP13.93□□□□□ -0.18
SMARCAL1-201ENST00000357276 ESCO1Q5FWF5 840 aa13.93□□□□□ -0.18
SMARCAL1-201ENST00000357276 OTUD7BQ6GQQ9 843 aa13.93□□□□□ -0.18
SMARCAL1-201ENST00000357276 TOGARAM2Q6ZUX3 1019 aa13.93□□□□□ -0.18
SMARCAL1-201ENST00000357276 C14orf37Q86TY3 774 aa13.93□□□□□ -0.18
SMARCAL1-201ENST00000357276 DHX58Q96C10 678 aa13.93□□□□□ -0.18
SMARCAL1-201ENST00000357276 C8orf76Q96K31 380 aa13.93□□□□□ -0.18
SMARCAL1-201ENST00000357276 ANKZF1Q9H8Y5 726 aa13.93□□□□□ -0.18
SMARCAL1-201ENST00000357276 HPS5Q9UPZ3 1129 aa13.93□□□□□ -0.18
SMARCAL1-201ENST00000357276 POLR3DP05423 398 aaPredicted RBP13.93□□□□□ -0.18
SMARCAL1-201ENST00000357276 MPRIPQ6WCQ1 1025 aa13.93□□□□□ -0.18
SMARCAL1-201ENST00000357276 DDX46Q7L014 1031 aaKnown RBP13.93□□□□□ -0.18
SMARCAL1-201ENST00000357276 DHX16O60231 1041 aaKnown RBP13.92□□□□□ -0.18
SMARCAL1-201ENST00000357276 PPP6R2O75170 966 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms