RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 COL1A1P02452 1464 aaPredicted RBP16.45■□□□□ 0.22
LSS-201ENST00000356396 SYCE3A1L190 88 aa16.45■□□□□ 0.22
LSS-201ENST00000356396 BRD1O95696 1058 aa16.45■□□□□ 0.22
LSS-201ENST00000356396 DOK7Q18PE1 504 aa16.45■□□□□ 0.22
LSS-201ENST00000356396 KLHL34Q8N239 644 aa16.45■□□□□ 0.22
LSS-201ENST00000356396 WNK3Q9BYP7 1800 aa16.45■□□□□ 0.22
LSS-201ENST00000356396 CNTNAP4Q9C0A0 1308 aa16.45■□□□□ 0.22
LSS-201ENST00000356396 PRC1O43663 620 aa16.44■□□□□ 0.22
LSS-201ENST00000356396 RASGRP2Q7LDG7 609 aa16.44■□□□□ 0.22
LSS-201ENST00000356396 TMEM63CQ9P1W3 806 aa16.44■□□□□ 0.22
LSS-201ENST00000356396 U3KPZ7 1027 aaPredicted RBP16.44■□□□□ 0.22
LSS-201ENST00000356396 CHRNA5P30532 468 aa16.44■□□□□ 0.22
LSS-201ENST00000356396 KLF18A0A0U1RQI7 1052 aa16.44■□□□□ 0.22
LSS-201ENST00000356396 NUCB2P80303 420 aa16.44■□□□□ 0.22
LSS-201ENST00000356396 CLEC4GQ6UXB4 293 aa16.44■□□□□ 0.22
LSS-201ENST00000356396 ZNF622Q969S3 477 aaKnown RBP eCLIP16.44■□□□□ 0.223e-6■□□□□ 8.7
LSS-201ENST00000356396 HELLSQ9NRZ9 838 aa16.44■□□□□ 0.22
LSS-201ENST00000356396 TCRBV5S4A2TA0A5A2 114 aa16.43■□□□□ 0.22
LSS-201ENST00000356396 CTDNEP1O95476 244 aa16.43■□□□□ 0.22
LSS-201ENST00000356396 CAMK4Q16566 473 aa16.43■□□□□ 0.22
LSS-201ENST00000356396 RPGRQ92834 1020 aaKnown RBP16.43■□□□□ 0.22
LSS-201ENST00000356396 STRBPQ96SI9 672 aaKnown RBP16.43■□□□□ 0.22
LSS-201ENST00000356396 NAPBQ9H115 298 aa16.43■□□□□ 0.22
LSS-201ENST00000356396 PCDHAC2Q9Y5I4 1007 aa16.43■□□□□ 0.22
LSS-201ENST00000356396 POLR3DP05423 398 aaPredicted RBP16.43■□□□□ 0.22
LSS-201ENST00000356396 MMP10P09238 476 aa16.43■□□□□ 0.22
LSS-201ENST00000356396 PSMA5P28066 241 aa16.43■□□□□ 0.22
LSS-201ENST00000356396 GPSM2P81274 684 aa16.43■□□□□ 0.22
LSS-201ENST00000356396 IMMTQ16891 758 aaKnown RBP16.42■□□□□ 0.22
LSS-201ENST00000356396 FAM47AQ5JRC9 791 aa16.42■□□□□ 0.22
LSS-201ENST00000356396 IFNL3Q8IZI9 196 aa16.42■□□□□ 0.22
LSS-201ENST00000356396 SAP30BPQ9UHR5 308 aaKnown RBP16.42■□□□□ 0.22
LSS-201ENST00000356396 MTMR6Q9Y217 621 aa16.42■□□□□ 0.22
LSS-201ENST00000356396 UFL1O94874 794 aa16.42■□□□□ 0.22
LSS-201ENST00000356396 XRCC6P12956 609 aaKnown RBP eCLIP16.42■□□□□ 0.226e-7■■■■□ 25.5
LSS-201ENST00000356396 MAP3K12Q12852 859 aa16.42■□□□□ 0.22
LSS-201ENST00000356396 BSDC1Q9NW68 430 aaPredicted RBP16.42■□□□□ 0.22
LSS-201ENST00000356396 GSG1L2A8MUP6 293 aa16.41■□□□□ 0.22
LSS-201ENST00000356396 ARID4AP29374 1257 aaPredicted RBP16.41■□□□□ 0.22
LSS-201ENST00000356396 CAVIN4Q5BKX8 364 aa16.41■□□□□ 0.22
LSS-201ENST00000356396 DHX32Q7L7V1 743 aaKnown RBP16.41■□□□□ 0.22
LSS-201ENST00000356396 RALYLQ86SE5 291 aaKnown RBP16.41■□□□□ 0.22
LSS-201ENST00000356396 NUP133Q8WUM0 1156 aa16.41■□□□□ 0.22
LSS-201ENST00000356396 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.41■□□□□ 0.224e-8■■■■□ 24.6
LSS-201ENST00000356396 GOLGA8BA8MQT2 603 aa16.41■□□□□ 0.22
LSS-201ENST00000356396 SLC44A5Q8NCS7 719 aa16.41■□□□□ 0.22
LSS-201ENST00000356396 ZNF804BA4D1E1 1349 aa16.41■□□□□ 0.22
LSS-201ENST00000356396 AKAP11Q9UKA4 1901 aa16.41■□□□□ 0.22
LSS-201ENST00000356396 MECOMQ03112 1051 aa16.41■□□□□ 0.22
LSS-201ENST00000356396 CIZ1Q9ULV3 898 aaPredicted RBP16.41■□□□□ 0.22
LSS-201ENST00000356396 MYH3P11055 1940 aa16.4■□□□□ 0.22
LSS-201ENST00000356396 ZSCAN22P10073 491 aaPredicted RBP16.4■□□□□ 0.22
LSS-201ENST00000356396 HIBADHP31937 336 aaKnown RBP16.4■□□□□ 0.22
LSS-201ENST00000356396 SF3B3Q15393 1217 aaKnown RBP16.4■□□□□ 0.22
LSS-201ENST00000356396 DDX11L8A8MPP1 907 aa16.4■□□□□ 0.22
LSS-201ENST00000356396 RXRBP28702 533 aa16.4■□□□□ 0.22
LSS-201ENST00000356396 NFXL1Q6ZNB6 911 aa16.4■□□□□ 0.22
LSS-201ENST00000356396 DYNLL2Q96FJ2 89 aa16.4■□□□□ 0.22
LSS-201ENST00000356396 ZSWIM5Q9P217 1185 aa16.4■□□□□ 0.22
LSS-201ENST00000356396 NWD2Q9ULI1 1742 aa16.4■□□□□ 0.22
LSS-201ENST00000356396 PTPDC1A2A3K4 754 aa16.39■□□□□ 0.21
LSS-201ENST00000356396 ONECUT3O60422 494 aaPredicted RBP16.39■□□□□ 0.21
LSS-201ENST00000356396 ATP2B1P20020 1258 aa16.39■□□□□ 0.21
LSS-201ENST00000356396 PDIA3P30101 505 aaKnown RBP16.39■□□□□ 0.21
LSS-201ENST00000356396 POLLQ9UGP5 575 aa16.39■□□□□ 0.21
LSS-201ENST00000356396 ATRNO75882 1429 aa16.39■□□□□ 0.21
LSS-201ENST00000356396 PLEKHG2Q9H7P9 1386 aa16.39■□□□□ 0.21
LSS-201ENST00000356396 F13A1P00488 732 aa16.39■□□□□ 0.21
LSS-201ENST00000356396 SCNN1DP51172 638 aa16.39■□□□□ 0.21
LSS-201ENST00000356396 FAM184AQ8NB25 1140 aa16.39■□□□□ 0.21
LSS-201ENST00000356396 DSCC1Q9BVC3 393 aa16.39■□□□□ 0.21
LSS-201ENST00000356396 CWC22Q9HCG8 908 aaKnown RBP16.39■□□□□ 0.21
LSS-201ENST00000356396 BRWD3Q6RI45 1802 aa16.39■□□□□ 0.21
LSS-201ENST00000356396 GOLGA6L22H0YM25 854 aa16.38■□□□□ 0.21
LSS-201ENST00000356396 RANBP6O60518 1105 aaKnown RBP16.38■□□□□ 0.21
LSS-201ENST00000356396 USP17L8P0C7I0 530 aa16.38■□□□□ 0.21
LSS-201ENST00000356396 CACNB3P54284 484 aa16.38■□□□□ 0.21
LSS-201ENST00000356396 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.38■□□□□ 0.21
LSS-201ENST00000356396 DDX60Q8IY21 1712 aaKnown RBP16.38■□□□□ 0.21
LSS-201ENST00000356396 CDC27P30260 824 aa16.38■□□□□ 0.21
LSS-201ENST00000356396 NAA16Q6N069 864 aaPredicted RBP16.38■□□□□ 0.21
LSS-201ENST00000356396 USP17L12C9JPN9 530 aa16.38■□□□□ 0.21
LSS-201ENST00000356396 USP17L21D6R901 530 aa16.38■□□□□ 0.21
LSS-201ENST00000356396 H3BQV1 296 aa16.38■□□□□ 0.21
LSS-201ENST00000356396 MCM2P49736 904 aa16.38■□□□□ 0.21
LSS-201ENST00000356396 PLCB2Q00722 1185 aa16.38■□□□□ 0.21
LSS-201ENST00000356396 IFFO2Q5TF58 517 aa16.38■□□□□ 0.21
LSS-201ENST00000356396 CPVLQ9H3G5 476 aa16.38■□□□□ 0.21
LSS-201ENST00000356396 DBNDD1Q9H9R9 158 aa16.38■□□□□ 0.21
LSS-201ENST00000356396 GOLGA6L3A6NEY3 463 aa16.37■□□□□ 0.21
LSS-201ENST00000356396 RBM6P78332 1123 aaKnown RBP16.37■□□□□ 0.21
LSS-201ENST00000356396 KCNB2Q92953 911 aa16.37■□□□□ 0.21
LSS-201ENST00000356396 GTF3C6Q969F1 213 aa16.37■□□□□ 0.21
LSS-201ENST00000356396 UQCRFS1P1P0C7P4 283 aa16.37■□□□□ 0.21
LSS-201ENST00000356396 RC3H1Q5TC82 1133 aaKnown RBP16.37■□□□□ 0.21
LSS-201ENST00000356396 POLRMTO00411 1230 aaKnown RBP16.36■□□□□ 0.21
LSS-201ENST00000356396 EXOSC10Q01780 885 aaKnown RBP16.36■□□□□ 0.21
LSS-201ENST00000356396 CLEC10AQ8IUN9 316 aa16.36■□□□□ 0.21
LSS-201ENST00000356396 TM6SF1Q9BZW5 370 aa16.36■□□□□ 0.21
LSS-201ENST00000356396 NYXQ9GZU5 481 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms