RNA–Protein interactions for RNA: ENST00000355371.8

SHTN1-202, Transcript of shootin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SHTN1, Length 5,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-202ENST00000355371 PPP1R2P41236 205 aa18.54■□□□□ 0.56
SHTN1-202ENST00000355371 TNNI2P48788 182 aa18.54■□□□□ 0.56
SHTN1-202ENST00000355371 LMBR1Q8WVP7 490 aa18.54■□□□□ 0.56
SHTN1-202ENST00000355371 DBNDD2Q9BQY9 259 aa18.54■□□□□ 0.56
SHTN1-202ENST00000355371 TTC12Q9H892 705 aaPredicted RBP18.54■□□□□ 0.56
SHTN1-202ENST00000355371 RNF123Q5XPI4 1314 aa18.54■□□□□ 0.56
SHTN1-202ENST00000355371 KRT86O43790 486 aa18.54■□□□□ 0.56
SHTN1-202ENST00000355371 TIMM10P62072 90 aa18.54■□□□□ 0.56
SHTN1-202ENST00000355371 XAGE2Q96GT9 111 aa18.54■□□□□ 0.56
SHTN1-202ENST00000355371 GCC2Q8IWJ2 1684 aa18.53■□□□□ 0.56
SHTN1-202ENST00000355371 HSF2BPO75031 334 aa18.53■□□□□ 0.56
SHTN1-202ENST00000355371 DEXIO95424 95 aa18.53■□□□□ 0.56
SHTN1-202ENST00000355371 ZSWIM4Q9H7M6 989 aa18.53■□□□□ 0.56
SHTN1-202ENST00000355371 CTAGE9A4FU28 777 aa18.53■□□□□ 0.56
SHTN1-202ENST00000355371 MMRN2Q9H8L6 949 aa18.53■□□□□ 0.56
SHTN1-202ENST00000355371 PARP1P09874 1014 aaKnown RBP18.53■□□□□ 0.56
SHTN1-202ENST00000355371 CERS3Q8IU89 383 aa18.53■□□□□ 0.56
SHTN1-202ENST00000355371 LGR6Q9HBX8 967 aa18.53■□□□□ 0.56
SHTN1-202ENST00000355371 ARFGAP3Q9NP61 516 aa18.52■□□□□ 0.56
SHTN1-202ENST00000355371 NEO1Q92859 1461 aa18.52■□□□□ 0.56
SHTN1-202ENST00000355371 B4DLN1 442 aa18.52■□□□□ 0.56
SHTN1-202ENST00000355371 MRPL12P52815 198 aaKnown RBP18.52■□□□□ 0.56
SHTN1-202ENST00000355371 KIF5AQ12840 1032 aa18.52■□□□□ 0.56
SHTN1-202ENST00000355371 TRAPPC3LQ5T215 181 aa18.52■□□□□ 0.56
SHTN1-202ENST00000355371 KBTBD3Q8NAB2 608 aa18.52■□□□□ 0.56
SHTN1-202ENST00000355371 FSD2A1L4K1 749 aa18.52■□□□□ 0.55
SHTN1-202ENST00000355371 SLU7O95391 586 aaKnown RBP18.52■□□□□ 0.55
SHTN1-202ENST00000355371 ACTN2P35609 894 aa18.52■□□□□ 0.55
SHTN1-202ENST00000355371 GCKRQ14397 625 aa18.52■□□□□ 0.55
SHTN1-202ENST00000355371 SUCLG2Q96I99 432 aa18.51■□□□□ 0.55
SHTN1-202ENST00000355371 MYL5Q02045 173 aa18.51■□□□□ 0.55
SHTN1-202ENST00000355371 CCDC42Q96M95 316 aa18.51■□□□□ 0.55
SHTN1-202ENST00000355371 UBXN1Q04323 297 aa18.51■□□□□ 0.55
SHTN1-202ENST00000355371 CEP170Q5SW79 1584 aa18.51■□□□□ 0.55
SHTN1-202ENST00000355371 ANGEL1Q9UNK9 670 aaKnown RBP18.51■□□□□ 0.55
SHTN1-202ENST00000355371 KDM5AP29375 1690 aaKnown RBP18.51■□□□□ 0.55
SHTN1-202ENST00000355371 FAM13AO94988 1023 aa18.51■□□□□ 0.55
SHTN1-202ENST00000355371 RXRAP19793 462 aa18.51■□□□□ 0.55
SHTN1-202ENST00000355371 IFNKQ9P0W0 207 aa18.51■□□□□ 0.55
SHTN1-202ENST00000355371 HIBADHP31937 336 aaKnown RBP18.5■□□□□ 0.55
SHTN1-202ENST00000355371 PLCD1P51178 756 aa18.5■□□□□ 0.55
SHTN1-202ENST00000355371 EIF4A1P60842 406 aaKnown RBP18.5■□□□□ 0.55
SHTN1-202ENST00000355371 GIGYF2Q6Y7W6 1299 aaKnown RBP18.5■□□□□ 0.55
SHTN1-202ENST00000355371 HS2ST1Q7LGA3 356 aa18.5■□□□□ 0.55
SHTN1-202ENST00000355371 KRT222Q8N1A0 295 aa18.5■□□□□ 0.55
SHTN1-202ENST00000355371 RASAL2Q9UJF2 1139 aa18.5■□□□□ 0.55
SHTN1-202ENST00000355371 TMEM2Q9UHN6 1383 aa18.5■□□□□ 0.55
SHTN1-202ENST00000355371 CPA1P15085 419 aa18.5■□□□□ 0.55
SHTN1-202ENST00000355371 NEK11Q8NG66 645 aa18.5■□□□□ 0.55
SHTN1-202ENST00000355371 TFCP2L1Q9NZI6 479 aa18.5■□□□□ 0.55
SHTN1-202ENST00000355371 GNPATO15228 680 aa18.5■□□□□ 0.55
SHTN1-202ENST00000355371 CCDC129Q6ZRS4 1044 aa18.5■□□□□ 0.55
SHTN1-202ENST00000355371 B4E1Z4 1266 aa18.5■□□□□ 0.55
SHTN1-202ENST00000355371 PPP2R5BQ15173 497 aa18.5■□□□□ 0.55
SHTN1-202ENST00000355371 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.5■□□□□ 0.55
SHTN1-202ENST00000355371 PNMA6EA0A0J9YXQ4 647 aa18.5■□□□□ 0.55
SHTN1-202ENST00000355371 FMNL3Q8IVF7 1028 aa18.49■□□□□ 0.55
SHTN1-202ENST00000355371 CCDC155Q8N6L0 562 aa18.49■□□□□ 0.55
SHTN1-202ENST00000355371 CNBD1Q8NA66 436 aa18.49■□□□□ 0.55
SHTN1-202ENST00000355371 LPIN2Q92539 896 aa18.49■□□□□ 0.55
SHTN1-202ENST00000355371 ORAI2Q96SN7 254 aa18.49■□□□□ 0.55
SHTN1-202ENST00000355371 PHACTR2O75167 634 aa18.49■□□□□ 0.55
SHTN1-202ENST00000355371 CNGA4Q8IV77 575 aa18.49■□□□□ 0.55
SHTN1-202ENST00000355371 ABCC4O15439 1325 aa18.49■□□□□ 0.55
SHTN1-202ENST00000355371 GPAA1O43292 621 aa18.49■□□□□ 0.55
SHTN1-202ENST00000355371 ANO1Q5XXA6 986 aa18.49■□□□□ 0.55
SHTN1-202ENST00000355371 GOLGA1Q92805 767 aa18.49■□□□□ 0.55
SHTN1-202ENST00000355371 RNF187Q5TA31 235 aaPredicted RBP18.49■□□□□ 0.55
SHTN1-202ENST00000355371 SPECC1LQ69YQ0 1117 aa18.49■□□□□ 0.55
SHTN1-202ENST00000355371 TEX11Q8IYF3 940 aa18.48■□□□□ 0.55
SHTN1-202ENST00000355371 PTGS1P23219 599 aa18.48■□□□□ 0.55
SHTN1-202ENST00000355371 ZKSCAN3Q9BRR0 538 aa18.48■□□□□ 0.55
SHTN1-202ENST00000355371 IMPG2Q9BZV3 1241 aa18.48■□□□□ 0.55
SHTN1-202ENST00000355371 SH2D4AQ9H788 454 aa18.48■□□□□ 0.55
SHTN1-202ENST00000355371 MROH5Q6ZUA9 1318 aa18.48■□□□□ 0.55
SHTN1-202ENST00000355371 STX17P56962 302 aa18.48■□□□□ 0.55
SHTN1-202ENST00000355371 FAM227BQ96M60 508 aa18.48■□□□□ 0.55
SHTN1-202ENST00000355371 ARMT1Q9H993 441 aa18.48■□□□□ 0.55
SHTN1-202ENST00000355371 LUC7L2Q9Y383 392 aaKnown RBP18.48■□□□□ 0.55
SHTN1-202ENST00000355371 A0A1B0GVL5 298 aa18.47■□□□□ 0.55
SHTN1-202ENST00000355371 VEZTQ9HBM0 779 aa18.47■□□□□ 0.55
SHTN1-202ENST00000355371 PRDM10Q9NQV6 1147 aa18.47■□□□□ 0.55
SHTN1-202ENST00000355371 SV2BQ7L1I2 683 aa18.47■□□□□ 0.55
SHTN1-202ENST00000355371 GTF2F1P35269 517 aaKnown RBP eCLIP18.47■□□□□ 0.551e-7■□□□□ 9.1
SHTN1-202ENST00000355371 KLHDC4Q8TBB5 520 aa18.47■□□□□ 0.55
SHTN1-202ENST00000355371 SYNCQ9H7C4 482 aa18.47■□□□□ 0.55
SHTN1-202ENST00000355371 VWA3AA6NCI4 1184 aa18.46■□□□□ 0.55
SHTN1-202ENST00000355371 RPL13P26373 211 aaKnown RBP18.46■□□□□ 0.55
SHTN1-202ENST00000355371 HSPA4P34932 840 aa18.46■□□□□ 0.55
SHTN1-202ENST00000355371 LMAN1P49257 510 aa18.46■□□□□ 0.55
SHTN1-202ENST00000355371 GLT8D2Q9H1C3 349 aa18.46■□□□□ 0.55
SHTN1-202ENST00000355371 CLSTN2Q9H4D0 955 aa18.46■□□□□ 0.55
SHTN1-202ENST00000355371 RIMBP2O15034 1052 aa18.46■□□□□ 0.55
SHTN1-202ENST00000355371 TUBBP07437 444 aa18.46■□□□□ 0.55
SHTN1-202ENST00000355371 HSPA2P54652 639 aa18.46■□□□□ 0.55
SHTN1-202ENST00000355371 TM6SF1Q9BZW5 370 aa18.46■□□□□ 0.55
SHTN1-202ENST00000355371 CCDC87Q9NVE4 849 aa18.46■□□□□ 0.55
SHTN1-202ENST00000355371 CCDC65Q8IXS2 484 aa18.46■□□□□ 0.55
SHTN1-202ENST00000355371 WDR66Q8TBY9 1149 aa18.46■□□□□ 0.55
SHTN1-202ENST00000355371 MRVI1Q9Y6F6 885 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms