RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 FOXO4P98177 505 aa10.86□□□□□ -0.67
SMG6-202ENST00000354901 RESTQ13127 1097 aa10.86□□□□□ -0.67
SMG6-202ENST00000354901 SYCP1Q15431 976 aa10.86□□□□□ -0.67
SMG6-202ENST00000354901 RABL6Q3YEC7 729 aaPredicted RBP10.86□□□□□ -0.67
SMG6-202ENST00000354901 USPL1Q5W0Q7 1092 aa10.86□□□□□ -0.67
SMG6-202ENST00000354901 ATG9AQ7Z3C6 839 aa10.86□□□□□ -0.67
SMG6-202ENST00000354901 ARGLU1Q9NWB6 273 aaPredicted RBP10.86□□□□□ -0.67
SMG6-202ENST00000354901 A0A1B0GUL7 405 aa10.85□□□□□ -0.67
SMG6-202ENST00000354901 COL22A1Q8NFW1 1626 aaPredicted RBP10.85□□□□□ -0.67
SMG6-202ENST00000354901 NCAPGQ9BPX3 1015 aa10.85□□□□□ -0.67
SMG6-202ENST00000354901 PRDM11Q9NQV5 511 aa10.85□□□□□ -0.67
SMG6-202ENST00000354901 FHOD1Q9Y613 1164 aa10.85□□□□□ -0.67
SMG6-202ENST00000354901 CCDC69A6NI79 296 aa10.85□□□□□ -0.67
SMG6-202ENST00000354901 PI16Q6UXB8 463 aa10.85□□□□□ -0.67
SMG6-202ENST00000354901 DHX32Q7L7V1 743 aaKnown RBP10.85□□□□□ -0.67
SMG6-202ENST00000354901 CLSTN2Q9H4D0 955 aa10.85□□□□□ -0.67
SMG6-202ENST00000354901 ZSWIM4Q9H7M6 989 aa10.85□□□□□ -0.67
SMG6-202ENST00000354901 DDX19AQ9NUU7 478 aaKnown RBP10.85□□□□□ -0.67
SMG6-202ENST00000354901 ELP1O95163 1332 aa10.85□□□□□ -0.67
SMG6-202ENST00000354901 ME1P48163 572 aa10.85□□□□□ -0.67
SMG6-202ENST00000354901 TMED8Q6PL24 325 aaPredicted RBP10.85□□□□□ -0.67
SMG6-202ENST00000354901 LEKR1Q6ZMV7 388 aa10.85□□□□□ -0.67
SMG6-202ENST00000354901 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.85□□□□□ -0.67
SMG6-202ENST00000354901 C5P01031 1676 aa10.84□□□□□ -0.67
SMG6-202ENST00000354901 BECN2A8MW95 431 aa10.84□□□□□ -0.67
SMG6-202ENST00000354901 E7EWF7 191 aa10.84□□□□□ -0.67
SMG6-202ENST00000354901 URI1O94763 535 aaPredicted RBP10.84□□□□□ -0.67
SMG6-202ENST00000354901 HSPD1P10809 573 aaKnown RBP10.84□□□□□ -0.67
SMG6-202ENST00000354901 ADORA1P30542 326 aa10.84□□□□□ -0.67
SMG6-202ENST00000354901 CASP7P55210 303 aa10.84□□□□□ -0.67
SMG6-202ENST00000354901 SNW1Q13573 536 aaKnown RBP10.84□□□□□ -0.67
SMG6-202ENST00000354901 TSGA10IPQ3SY00 556 aa10.84□□□□□ -0.67
SMG6-202ENST00000354901 NOM1Q5C9Z4 860 aaKnown RBP10.84□□□□□ -0.67
SMG6-202ENST00000354901 ISM2Q6H9L7 571 aa10.84□□□□□ -0.67
SMG6-202ENST00000354901 CCAR1Q8IX12 1150 aaKnown RBP10.84□□□□□ -0.67
SMG6-202ENST00000354901 NSUN7Q8NE18 718 aaKnown RBP10.84□□□□□ -0.67
SMG6-202ENST00000354901 USP28Q96RU2 1077 aa10.84□□□□□ -0.67
SMG6-202ENST00000354901 GJB4Q9NTQ9 266 aa10.84□□□□□ -0.67
SMG6-202ENST00000354901 CTDNEP1O95476 244 aa10.84□□□□□ -0.67
SMG6-202ENST00000354901 ZNF622Q969S3 477 aaKnown RBP eCLIP10.84□□□□□ -0.674e-6■■■■□ 24.2
SMG6-202ENST00000354901 AK7Q96M32 723 aa10.84□□□□□ -0.67
SMG6-202ENST00000354901 SRRTQ9BXP5 876 aaKnown RBP10.84□□□□□ -0.67
SMG6-202ENST00000354901 MAST3O60307 1309 aa10.84□□□□□ -0.67
SMG6-202ENST00000354901 M0R2C6 588 aa10.83□□□□□ -0.67
SMG6-202ENST00000354901 POLR3DP05423 398 aaPredicted RBP10.83□□□□□ -0.67
SMG6-202ENST00000354901 AXDND1Q5T1B0 1012 aaPredicted RBP10.83□□□□□ -0.67
SMG6-202ENST00000354901 PACS2Q86VP3 889 aa10.83□□□□□ -0.67
SMG6-202ENST00000354901 SYNE4Q8N205 404 aa10.83□□□□□ -0.67
SMG6-202ENST00000354901 FAM89AQ96GI7 184 aa10.83□□□□□ -0.67
SMG6-202ENST00000354901 CEP126Q9P2H0 1117 aa10.83□□□□□ -0.67
SMG6-202ENST00000354901 WDR17Q8IZU2 1322 aa10.83□□□□□ -0.68
SMG6-202ENST00000354901 PHACTR2O75167 634 aa10.83□□□□□ -0.68
SMG6-202ENST00000354901 CFAP45Q9UL16 551 aa10.83□□□□□ -0.68
SMG6-202ENST00000354901 H7C1W4 665 aa10.83□□□□□ -0.68
SMG6-202ENST00000354901 EYA2O00167 538 aa10.83□□□□□ -0.68
SMG6-202ENST00000354901 CCDC57Q2TAC2 916 aa10.83□□□□□ -0.68
SMG6-202ENST00000354901 FOXR1Q6PIV2 292 aa10.83□□□□□ -0.68
SMG6-202ENST00000354901 C11orf57Q6ZUT1 292 aaPredicted RBP10.83□□□□□ -0.68
SMG6-202ENST00000354901 SRLQ86TD4 932 aa10.83□□□□□ -0.68
SMG6-202ENST00000354901 OSBP2Q969R2 916 aa10.83□□□□□ -0.68
SMG6-202ENST00000354901 DNAI1Q9UI46 699 aa10.83□□□□□ -0.68
SMG6-202ENST00000354901 A0A0G2JS52 829 aa10.82□□□□□ -0.68
SMG6-202ENST00000354901 GPTP24298 496 aa10.82□□□□□ -0.68
SMG6-202ENST00000354901 IL15P40933 162 aaPredicted RBP10.82□□□□□ -0.68
SMG6-202ENST00000354901 TTC39AQ5SRH9 613 aa10.82□□□□□ -0.68
SMG6-202ENST00000354901 CCDC73Q6ZRK6 1079 aa10.82□□□□□ -0.68
SMG6-202ENST00000354901 ZCRB1Q8TBF4 217 aaKnown RBP10.82□□□□□ -0.68
SMG6-202ENST00000354901 GOLPH3LQ9H4A5 285 aa10.82□□□□□ -0.68
SMG6-202ENST00000354901 YY1AP1Q9H869 796 aa10.82□□□□□ -0.68
SMG6-202ENST00000354901 COL14A1Q05707 1796 aaKnown RBP10.82□□□□□ -0.68
SMG6-202ENST00000354901 COL5A2P05997 1499 aaPredicted RBP10.82□□□□□ -0.68
SMG6-202ENST00000354901 PFKFB2O60825 505 aa10.82□□□□□ -0.68
SMG6-202ENST00000354901 SMC1AQ14683 1233 aaKnown RBP10.82□□□□□ -0.68
SMG6-202ENST00000354901 VPS18Q9P253 973 aa10.82□□□□□ -0.68
SMG6-202ENST00000354901 RNF113AO15541 343 aaKnown RBP10.82□□□□□ -0.68
SMG6-202ENST00000354901 GUCY2CP25092 1073 aa10.82□□□□□ -0.68
SMG6-202ENST00000354901 SCARF1Q14162 830 aa10.82□□□□□ -0.68
SMG6-202ENST00000354901 MCM6Q14566 821 aa10.82□□□□□ -0.68
SMG6-202ENST00000354901 ZMYM1Q5SVZ6 1142 aa10.82□□□□□ -0.68
SMG6-202ENST00000354901 FSIP1Q8NA03 581 aa10.82□□□□□ -0.68
SMG6-202ENST00000354901 ALDH8A1Q9H2A2 487 aaPredicted RBP10.82□□□□□ -0.68
SMG6-202ENST00000354901 ZSCAN16Q9H4T2 348 aaPredicted RBP10.82□□□□□ -0.68
SMG6-202ENST00000354901 LTBP4Q8N2S1 1624 aa10.82□□□□□ -0.68
SMG6-202ENST00000354901 KINO60870 393 aaKnown RBP10.81□□□□□ -0.68
SMG6-202ENST00000354901 LRRC8AQ8IWT6 810 aa10.81□□□□□ -0.68
SMG6-202ENST00000354901 A0A1B0GVL5 298 aa10.81□□□□□ -0.68
SMG6-202ENST00000354901 RXRAP19793 462 aa10.81□□□□□ -0.68
SMG6-202ENST00000354901 PDIA3P30101 505 aaKnown RBP10.81□□□□□ -0.68
SMG6-202ENST00000354901 SF3A1Q15459 793 aaKnown RBP10.81□□□□□ -0.68
SMG6-202ENST00000354901 CARD6Q9BX69 1037 aa10.81□□□□□ -0.68
SMG6-202ENST00000354901 RABEP2Q9H5N1 569 aa10.81□□□□□ -0.68
SMG6-202ENST00000354901 SH3TC1Q8TE82 1336 aa10.81□□□□□ -0.68
SMG6-202ENST00000354901 TDO2P48775 406 aa10.81□□□□□ -0.68
SMG6-202ENST00000354901 DHX8Q14562 1220 aaKnown RBP10.81□□□□□ -0.68
SMG6-202ENST00000354901 CCDC158Q5M9N0 1113 aa10.81□□□□□ -0.68
SMG6-202ENST00000354901 CTR9Q6PD62 1173 aa10.81□□□□□ -0.68
SMG6-202ENST00000354901 SDF4Q9BRK5 362 aa10.81□□□□□ -0.68
SMG6-202ENST00000354901 HELLSQ9NRZ9 838 aa10.81□□□□□ -0.68
SMG6-202ENST00000354901 ROBO1Q9Y6N7 1651 aa10.8□□□□□ -0.68
SMG6-202ENST00000354901 JCADQ9P266 1359 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms