RNA–Protein interactions for RNA: ENST00000354506.10

RPE-201, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 3,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-201ENST00000354506 VGLL3A8MV65 326 aa11.17□□□□□ -0.62
RPE-201ENST00000354506 KINO60870 393 aaKnown RBP11.17□□□□□ -0.62
RPE-201ENST00000354506 NDUFA8P51970 172 aa11.17□□□□□ -0.62
RPE-201ENST00000354506 UTP14CQ5TAP6 766 aaKnown RBP11.17□□□□□ -0.62
RPE-201ENST00000354506 CCDC73Q6ZRK6 1079 aa11.17□□□□□ -0.62
RPE-201ENST00000354506 YEATS4O95619 227 aa11.16□□□□□ -0.62
RPE-201ENST00000354506 ZFYP08048 801 aaPredicted RBP11.16□□□□□ -0.62
RPE-201ENST00000354506 CSB-PGBD3P0DP91 1061 aa11.16□□□□□ -0.62
RPE-201ENST00000354506 ERCC6LQ2NKX8 1250 aa11.16□□□□□ -0.62
RPE-201ENST00000354506 SYT10Q6XYQ8 523 aa11.16□□□□□ -0.62
RPE-201ENST00000354506 TMC6Q7Z403 805 aa11.16□□□□□ -0.62
RPE-201ENST00000354506 MRPS27Q92552 414 aaKnown RBP11.16□□□□□ -0.62
RPE-201ENST00000354506 NBPF3Q9H094 633 aa11.16□□□□□ -0.62
RPE-201ENST00000354506 KIAA1468Q9P260 1216 aa11.16□□□□□ -0.62
RPE-201ENST00000354506 DENND2AQ9ULE3 1009 aa11.16□□□□□ -0.62
RPE-201ENST00000354506 PCDH11XQ9BZA7 1347 aa11.16□□□□□ -0.62
RPE-201ENST00000354506 PCDH11YQ9BZA8 1340 aa11.16□□□□□ -0.62
RPE-201ENST00000354506 TOGARAM1Q9Y4F4 1720 aa11.16□□□□□ -0.62
RPE-201ENST00000354506 SCARF1Q14162 830 aa11.16□□□□□ -0.62
RPE-201ENST00000354506 DPCR1Q3MIW9 517 aa11.16□□□□□ -0.62
RPE-201ENST00000354506 KMT5BQ4FZB7 885 aa11.16□□□□□ -0.62
RPE-201ENST00000354506 AXDND1Q5T1B0 1012 aaPredicted RBP11.16□□□□□ -0.62
RPE-201ENST00000354506 XAGE2Q96GT9 111 aa11.16□□□□□ -0.62
RPE-201ENST00000354506 AIFM3Q96NN9 605 aa11.16□□□□□ -0.62
RPE-201ENST00000354506 PUS7LQ9H0K6 701 aaKnown RBP11.16□□□□□ -0.62
RPE-201ENST00000354506 CTNNA3Q9UI47 895 aa11.16□□□□□ -0.62
RPE-201ENST00000354506 ADORA1P30542 326 aa11.16□□□□□ -0.62
RPE-201ENST00000354506 SPECC1Q5M775 1068 aa11.16□□□□□ -0.62
RPE-201ENST00000354506 HOMER1Q86YM7 354 aa11.16□□□□□ -0.62
RPE-201ENST00000354506 IFNKQ9P0W0 207 aa11.16□□□□□ -0.62
RPE-201ENST00000354506 TCIRG1Q13488 830 aa11.15□□□□□ -0.62
RPE-201ENST00000354506 NCAPHQ15003 741 aa11.15□□□□□ -0.62
RPE-201ENST00000354506 ZRSR1Q15695 479 aaKnown RBP11.15□□□□□ -0.62
RPE-201ENST00000354506 FBXO38Q6PIJ6 1188 aa11.15□□□□□ -0.62
RPE-201ENST00000354506 PI16Q6UXB8 463 aa11.15□□□□□ -0.62
RPE-201ENST00000354506 CCDC82Q8N4S0 544 aa11.15□□□□□ -0.62
RPE-201ENST00000354506 NKX2-3Q8TAU0 364 aa11.15□□□□□ -0.62
RPE-201ENST00000354506 ZNF512BQ96KM6 892 aaPredicted RBP11.15□□□□□ -0.62
RPE-201ENST00000354506 HSD3B7Q9H2F3 369 aa11.15□□□□□ -0.62
RPE-201ENST00000354506 IMPACTQ9P2X3 320 aa11.15□□□□□ -0.62
RPE-201ENST00000354506 ATRNO75882 1429 aa11.15□□□□□ -0.62
RPE-201ENST00000354506 KIF28PB7ZC32 967 aa11.15□□□□□ -0.62
RPE-201ENST00000354506 POLR3GO15318 223 aaPredicted RBP11.15□□□□□ -0.62
RPE-201ENST00000354506 ATP2B1P20020 1258 aa11.15□□□□□ -0.62
RPE-201ENST00000354506 BRAPQ7Z569 592 aa11.15□□□□□ -0.62
RPE-201ENST00000354506 ZCRB1Q8TBF4 217 aaKnown RBP11.15□□□□□ -0.62
RPE-201ENST00000354506 KCNG4Q8TDN1 519 aa11.15□□□□□ -0.62
RPE-201ENST00000354506 AKAP2Q9Y2D5 859 aa11.15□□□□□ -0.62
RPE-201ENST00000354506 WDR17Q8IZU2 1322 aa11.14□□□□□ -0.63
RPE-201ENST00000354506 FAM237AA0A1B0GTK4 181 aa11.14□□□□□ -0.63
RPE-201ENST00000354506 UBE2Q2LH0YL09 131 aa11.14□□□□□ -0.63
RPE-201ENST00000354506 ATP1A3P13637 1013 aa11.14□□□□□ -0.63
RPE-201ENST00000354506 WASHC4Q2M389 1173 aa11.14□□□□□ -0.63
RPE-201ENST00000354506 MYSM1Q5VVJ2 828 aa11.14□□□□□ -0.63
RPE-201ENST00000354506 APPBP2Q92624 585 aa11.14□□□□□ -0.63
RPE-201ENST00000354506 ZBTB3Q9H5J0 574 aa11.14□□□□□ -0.63
RPE-201ENST00000354506 ZSWIM4Q9H7M6 989 aa11.14□□□□□ -0.63
RPE-201ENST00000354506 CEP126Q9P2H0 1117 aa11.14□□□□□ -0.63
RPE-201ENST00000354506 ECM29Q5VYK3 1845 aa11.14□□□□□ -0.63
RPE-201ENST00000354506 PRC1O43663 620 aa11.14□□□□□ -0.63
RPE-201ENST00000354506 ATF3P18847 181 aa11.14□□□□□ -0.63
RPE-201ENST00000354506 IMMTQ16891 758 aaKnown RBP11.14□□□□□ -0.63
RPE-201ENST00000354506 CCAR2Q8N163 923 aaKnown RBP11.14□□□□□ -0.63
RPE-201ENST00000354506 FEZ1Q99689 392 aa11.14□□□□□ -0.63
RPE-201ENST00000354506 RIPOR2Q9Y4F9 1068 aa11.14□□□□□ -0.63
RPE-201ENST00000354506 RIC1Q4ADV7 1423 aa11.14□□□□□ -0.63
RPE-201ENST00000354506 COL5A2P05997 1499 aaPredicted RBP11.14□□□□□ -0.63
RPE-201ENST00000354506 KIF23Q02241 960 aaPredicted RBP11.14□□□□□ -0.63
RPE-201ENST00000354506 LRRFIP1Q32MZ4 808 aaKnown RBP11.14□□□□□ -0.63
RPE-201ENST00000354506 CCDC158Q5M9N0 1113 aa11.14□□□□□ -0.63
RPE-201ENST00000354506 CEP57L1Q8IYX8 460 aa11.14□□□□□ -0.63
RPE-201ENST00000354506 XPO4Q9C0E2 1151 aaKnown RBP11.14□□□□□ -0.63
RPE-201ENST00000354506 NAT10Q9H0A0 1025 aaKnown RBP11.14□□□□□ -0.63
RPE-201ENST00000354506 XIRP1Q702N8 1843 aaKnown RBP11.13□□□□□ -0.63
RPE-201ENST00000354506 SPTLC2O15270 562 aa11.13□□□□□ -0.63
RPE-201ENST00000354506 PCCAP05165 728 aaPredicted RBP11.13□□□□□ -0.63
RPE-201ENST00000354506 CMA1P23946 247 aa11.13□□□□□ -0.63
RPE-201ENST00000354506 ZAP70P43403 619 aa11.13□□□□□ -0.63
RPE-201ENST00000354506 C8orf76Q96K31 380 aa11.13□□□□□ -0.63
RPE-201ENST00000354506 FAM53CQ9NYF3 392 aa11.13□□□□□ -0.63
RPE-201ENST00000354506 HPSEQ9Y251 543 aa11.13□□□□□ -0.63
RPE-201ENST00000354506 LRP6O75581 1613 aa11.13□□□□□ -0.63
RPE-201ENST00000354506 DHX16O60231 1041 aaKnown RBP11.13□□□□□ -0.63
RPE-201ENST00000354506 WDHD1O75717 1129 aaPredicted RBP11.13□□□□□ -0.63
RPE-201ENST00000354506 ZNF202O95125 648 aa11.13□□□□□ -0.63
RPE-201ENST00000354506 KCNJ6P48051 423 aa11.13□□□□□ -0.63
RPE-201ENST00000354506 STK38Q15208 465 aa11.13□□□□□ -0.63
RPE-201ENST00000354506 VGLL2Q8N8G2 317 aa11.13□□□□□ -0.63
RPE-201ENST00000354506 NCOA7Q8NI08 942 aa11.13□□□□□ -0.63
RPE-201ENST00000354506 TIGD1Q96MW7 591 aa11.13□□□□□ -0.63
RPE-201ENST00000354506 INCENPQ9NQS7 918 aa11.13□□□□□ -0.63
RPE-201ENST00000354506 GSDMDP57764 484 aa11.12□□□□□ -0.63
RPE-201ENST00000354506 CCDC57Q2TAC2 916 aa11.12□□□□□ -0.63
RPE-201ENST00000354506 ZBTB38Q8NAP3 1195 aaPredicted RBP11.12□□□□□ -0.63
RPE-201ENST00000354506 TUBE1Q9UJT0 475 aa11.12□□□□□ -0.63
RPE-201ENST00000354506 SRCAPQ6ZRS2 3230 aa11.12□□□□□ -0.63
RPE-201ENST00000354506 MYO5AQ9Y4I1 1855 aaKnown RBP11.12□□□□□ -0.63
RPE-201ENST00000354506 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.12□□□□□ -0.63
RPE-201ENST00000354506 KLF18A0A0U1RQI7 1052 aa11.12□□□□□ -0.63
RPE-201ENST00000354506 NLRP12P59046 1061 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms