RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 ZNF274Q96GC6 653 aaPredicted RBP8.19□□□□□ -1.1
TRIM55-203ENST00000350034 EPB41L4AQ9HCS5 686 aaPredicted RBP8.19□□□□□ -1.1
TRIM55-203ENST00000350034 DENND2AQ9ULE3 1009 aa8.19□□□□□ -1.1
TRIM55-203ENST00000350034 A0A1B0GUL6 1792 aa8.19□□□□□ -1.1
TRIM55-203ENST00000350034 DOCK2Q92608 1830 aa8.19□□□□□ -1.1
TRIM55-203ENST00000350034 TNRC6CQ9HCJ0 1690 aaKnown RBP8.18□□□□□ -1.1
TRIM55-203ENST00000350034 UBR3Q6ZT12 1888 aa8.18□□□□□ -1.1
TRIM55-203ENST00000350034 KLRG2A4D1S0 409 aaPredicted RBP8.18□□□□□ -1.1
TRIM55-203ENST00000350034 GSG1L2A8MUP6 293 aa8.18□□□□□ -1.1
TRIM55-203ENST00000350034 ZNF213O14771 459 aa8.18□□□□□ -1.1
TRIM55-203ENST00000350034 PLSCR1O15162 318 aa8.18□□□□□ -1.1
TRIM55-203ENST00000350034 MBD4O95243 580 aa8.18□□□□□ -1.1
TRIM55-203ENST00000350034 GNAT2P19087 354 aa8.18□□□□□ -1.1
TRIM55-203ENST00000350034 PDIA3P30101 505 aaKnown RBP8.18□□□□□ -1.1
TRIM55-203ENST00000350034 SCRN1Q12765 414 aa8.18□□□□□ -1.1
TRIM55-203ENST00000350034 TXNRD1Q16881 649 aa8.18□□□□□ -1.1
TRIM55-203ENST00000350034 CAVIN4Q5BKX8 364 aa8.18□□□□□ -1.1
TRIM55-203ENST00000350034 FOXD4L5Q5VV16 416 aaPredicted RBP8.18□□□□□ -1.1
TRIM55-203ENST00000350034 TMED8Q6PL24 325 aaPredicted RBP8.18□□□□□ -1.1
TRIM55-203ENST00000350034 TBC1D10CQ8IV04 446 aa8.18□□□□□ -1.1
TRIM55-203ENST00000350034 IFNL3Q8IZI9 196 aa8.18□□□□□ -1.1
TRIM55-203ENST00000350034 CCDC24Q8N4L8 307 aa8.18□□□□□ -1.1
TRIM55-203ENST00000350034 CNBD1Q8NA66 436 aa8.18□□□□□ -1.1
TRIM55-203ENST00000350034 NCOA7Q8NI08 942 aa8.18□□□□□ -1.1
TRIM55-203ENST00000350034 GPT2Q8TD30 523 aa8.18□□□□□ -1.1
TRIM55-203ENST00000350034 FOXD4L4Q8WXT5 416 aaPredicted RBP8.18□□□□□ -1.1
TRIM55-203ENST00000350034 AIDAQ96BJ3 306 aa8.18□□□□□ -1.1
TRIM55-203ENST00000350034 CHMP4CQ96CF2 233 aa8.18□□□□□ -1.1
TRIM55-203ENST00000350034 LRRC2Q9BYS8 371 aa8.18□□□□□ -1.1
TRIM55-203ENST00000350034 ATP6V1DQ9Y5K8 247 aa8.18□□□□□ -1.1
TRIM55-203ENST00000350034 DDX49Q9Y6V7 483 aaKnown RBP8.18□□□□□ -1.1
TRIM55-203ENST00000350034 SALL1Q9NSC2 1324 aa8.18□□□□□ -1.1
TRIM55-203ENST00000350034 MYH7P12883 1935 aa8.17□□□□□ -1.1
TRIM55-203ENST00000350034 PRC1O43663 620 aa8.17□□□□□ -1.1
TRIM55-203ENST00000350034 CTDNEP1O95476 244 aa8.17□□□□□ -1.1
TRIM55-203ENST00000350034 MBD3O95983 291 aa8.17□□□□□ -1.1
TRIM55-203ENST00000350034 SERPINB2P05120 415 aa8.17□□□□□ -1.1
TRIM55-203ENST00000350034 KLRK1P26718 216 aa8.17□□□□□ -1.1
TRIM55-203ENST00000350034 HOXA10P31260 410 aaPredicted RBP8.17□□□□□ -1.1
TRIM55-203ENST00000350034 HIBADHP31937 336 aaKnown RBP8.17□□□□□ -1.1
TRIM55-203ENST00000350034 MCM5P33992 734 aa8.17□□□□□ -1.1
TRIM55-203ENST00000350034 ZNF445P59923 1031 aa8.17□□□□□ -1.1
TRIM55-203ENST00000350034 HAND2P61296 217 aa8.17□□□□□ -1.1
TRIM55-203ENST00000350034 DDR1Q08345 913 aa8.17□□□□□ -1.1
TRIM55-203ENST00000350034 APOBRQ0VD83 1088 aa8.17□□□□□ -1.1
TRIM55-203ENST00000350034 L1TD1Q5T7N2 865 aaKnown RBP8.17□□□□□ -1.1
TRIM55-203ENST00000350034 LARP1BQ659C4 914 aaKnown RBP8.17□□□□□ -1.1
TRIM55-203ENST00000350034 LCORLQ8N3X6 602 aa8.17□□□□□ -1.1
TRIM55-203ENST00000350034 NSUN7Q8NE18 718 aaKnown RBP8.17□□□□□ -1.1
TRIM55-203ENST00000350034 ZNF384Q8TF68 577 aa8.17□□□□□ -1.1
TRIM55-203ENST00000350034 AKT1S1Q96B36 256 aa8.17□□□□□ -1.1
TRIM55-203ENST00000350034 RIOK1Q9BRS2 568 aaKnown RBP8.17□□□□□ -1.1
TRIM55-203ENST00000350034 GZF1Q9H116 711 aaPredicted RBP8.17□□□□□ -1.1
TRIM55-203ENST00000350034 ARMT1Q9H993 441 aa8.17□□□□□ -1.1
TRIM55-203ENST00000350034 LRP2BPQ9P2M1 347 aa8.17□□□□□ -1.1
TRIM55-203ENST00000350034 LEMD3Q9Y2U8 911 aa8.17□□□□□ -1.1
TRIM55-203ENST00000350034 BRWD3Q6RI45 1802 aa8.17□□□□□ -1.1
TRIM55-203ENST00000350034 POLRMTO00411 1230 aaKnown RBP8.16□□□□□ -1.1
TRIM55-203ENST00000350034 PRKAB2O43741 272 aa8.16□□□□□ -1.1
TRIM55-203ENST00000350034 JAK2O60674 1132 aa8.16□□□□□ -1.1
TRIM55-203ENST00000350034 CYP7A1P22680 504 aa8.16□□□□□ -1.1
TRIM55-203ENST00000350034 BAG6P46379 1132 aa8.16□□□□□ -1.1
TRIM55-203ENST00000350034 HMGN5P82970 282 aaKnown RBP8.16□□□□□ -1.1
TRIM55-203ENST00000350034 STK3Q13188 491 aa8.16□□□□□ -1.1
TRIM55-203ENST00000350034 CDC37L1Q7L3B6 337 aa8.16□□□□□ -1.1
TRIM55-203ENST00000350034 ADGRA1Q86SQ6 560 aa8.16□□□□□ -1.1
TRIM55-203ENST00000350034 USP48Q86UV5 1035 aa8.16□□□□□ -1.1
TRIM55-203ENST00000350034 GAS2L3Q86XJ1 694 aa8.16□□□□□ -1.1
TRIM55-203ENST00000350034 RGS22Q8NE09 1264 aa8.16□□□□□ -1.1
TRIM55-203ENST00000350034 NKX2-3Q8TAU0 364 aa8.16□□□□□ -1.1
TRIM55-203ENST00000350034 MTA3Q9BTC8 594 aa8.16□□□□□ -1.1
TRIM55-203ENST00000350034 GPHNQ9NQX3 736 aaPredicted RBP8.16□□□□□ -1.1
TRIM55-203ENST00000350034 BRPF3Q9ULD4 1205 aa8.16□□□□□ -1.1
TRIM55-203ENST00000350034 HPS5Q9UPZ3 1129 aa8.16□□□□□ -1.1
TRIM55-203ENST00000350034 TACC3Q9Y6A5 838 aa8.16□□□□□ -1.1
TRIM55-203ENST00000350034 CASZ1Q86V15 1759 aa8.15□□□□□ -1.1
TRIM55-203ENST00000350034 TIAM2Q8IVF5 1701 aa8.15□□□□□ -1.1
TRIM55-203ENST00000350034 XDHP47989 1333 aa8.15□□□□□ -1.1
TRIM55-203ENST00000350034 GOLGA6L3A6NEY3 463 aa8.15□□□□□ -1.1
TRIM55-203ENST00000350034 SH2B2O14492 632 aaPredicted RBP8.15□□□□□ -1.1
TRIM55-203ENST00000350034 DTNBO60941 627 aa8.15□□□□□ -1.1
TRIM55-203ENST00000350034 APPP05067 770 aa8.15□□□□□ -1.1
TRIM55-203ENST00000350034 ST5P78524 1137 aa8.15□□□□□ -1.1
TRIM55-203ENST00000350034 FGD1P98174 961 aa8.15□□□□□ -1.1
TRIM55-203ENST00000350034 RESTQ13127 1097 aa8.15□□□□□ -1.1
TRIM55-203ENST00000350034 ZNF827Q17R98 1081 aa8.15□□□□□ -1.1
TRIM55-203ENST00000350034 NAA16Q6N069 864 aaPredicted RBP8.15□□□□□ -1.1
TRIM55-203ENST00000350034 GIMAP6Q6P9H5 292 aa8.15□□□□□ -1.1
TRIM55-203ENST00000350034 CYB5R4Q7L1T6 521 aa8.15□□□□□ -1.1
TRIM55-203ENST00000350034 CHST3Q7LGC8 479 aa8.15□□□□□ -1.1
TRIM55-203ENST00000350034 RALYLQ86SE5 291 aaKnown RBP8.15□□□□□ -1.1
TRIM55-203ENST00000350034 TXNRD3Q86VQ6 643 aa8.15□□□□□ -1.1
TRIM55-203ENST00000350034 TDRD7Q8NHU6 1098 aaKnown RBP8.15□□□□□ -1.1
TRIM55-203ENST00000350034 STAG1Q8WVM7 1258 aa8.15□□□□□ -1.1
TRIM55-203ENST00000350034 TMEM87BQ96K49 555 aa8.15□□□□□ -1.1
TRIM55-203ENST00000350034 CRAMP1Q96RY5 1269 aa8.15□□□□□ -1.1
TRIM55-203ENST00000350034 NACAP1Q9BZK3 213 aa8.15□□□□□ -1.1
TRIM55-203ENST00000350034 NAPBQ9H115 298 aa8.15□□□□□ -1.1
TRIM55-203ENST00000350034 TFCP2L1Q9NZI6 479 aa8.15□□□□□ -1.1
TRIM55-203ENST00000350034 ANAPC4Q9UJX5 808 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms