RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 TAF6LQ9Y6J9 622 aa22.22■■□□□ 1.15
PTN-201ENST00000348225 ZMYM6O95789 1325 aa22.22■■□□□ 1.15
PTN-201ENST00000348225 APPP05067 770 aa22.21■■□□□ 1.15
PTN-201ENST00000348225 IL1R1P14778 569 aa22.21■■□□□ 1.15
PTN-201ENST00000348225 CPA1P15085 419 aa22.21■■□□□ 1.15
PTN-201ENST00000348225 ANKRD1Q15327 319 aa22.21■■□□□ 1.15
PTN-201ENST00000348225 CIZ1Q9ULV3 898 aaPredicted RBP22.21■■□□□ 1.15
PTN-201ENST00000348225 PATL2C9JE40 543 aaKnown RBP22.2■■□□□ 1.15
PTN-201ENST00000348225 ALDH8A1Q9H2A2 487 aaPredicted RBP22.2■■□□□ 1.15
PTN-201ENST00000348225 ARMT1Q9H993 441 aa22.2■■□□□ 1.15
PTN-201ENST00000348225 LIMCH1Q9UPQ0 1083 aa22.2■■□□□ 1.15
PTN-201ENST00000348225 LAMA4Q16363 1823 aa22.2■■□□□ 1.14
PTN-201ENST00000348225 DLEC1Q9Y238 1755 aa22.2■■□□□ 1.14
PTN-201ENST00000348225 MAGEB6P1A0A0J9YX57 407 aa22.2■■□□□ 1.14
PTN-201ENST00000348225 ZNF213O14771 459 aa22.2■■□□□ 1.14
PTN-201ENST00000348225 ALX1Q15699 326 aa22.2■■□□□ 1.14
PTN-201ENST00000348225 NOL8Q76FK4 1167 aaKnown RBP22.2■■□□□ 1.14
PTN-201ENST00000348225 NSUN4Q96CB9 384 aaKnown RBP22.2■■□□□ 1.14
PTN-201ENST00000348225 EYA3Q99504 573 aa22.2■■□□□ 1.14
PTN-201ENST00000348225 KIAA1551Q9HCM1 1747 aa22.19■■□□□ 1.14
PTN-201ENST00000348225 CHRNA5P30532 468 aa22.19■■□□□ 1.14
PTN-201ENST00000348225 MECOMQ03112 1051 aa22.19■■□□□ 1.14
PTN-201ENST00000348225 TTLL5Q6EMB2 1281 aa22.19■■□□□ 1.14
PTN-201ENST00000348225 DZIP1Q86YF9 867 aaKnown RBP22.19■■□□□ 1.14
PTN-201ENST00000348225 LCORLQ8N3X6 602 aa22.19■■□□□ 1.14
PTN-201ENST00000348225 NACAP1Q9BZK3 213 aa22.19■■□□□ 1.14
PTN-201ENST00000348225 ZC3H12CQ9C0D7 883 aaKnown RBP22.19■■□□□ 1.14
PTN-201ENST00000348225 FOXD4L1Q9NU39 408 aa22.19■■□□□ 1.14
PTN-201ENST00000348225 E7EWF7 191 aa22.18■■□□□ 1.14
PTN-201ENST00000348225 DDIT3P35638 169 aa22.18■■□□□ 1.14
PTN-201ENST00000348225 CUL4AQ13619 759 aa22.18■■□□□ 1.14
PTN-201ENST00000348225 MIGA1Q8NAN2 632 aa22.18■■□□□ 1.14
PTN-201ENST00000348225 ZSCAN31Q96LW9 406 aaPredicted RBP22.18■■□□□ 1.14
PTN-201ENST00000348225 COA1Q9GZY4 146 aa22.18■■□□□ 1.14
PTN-201ENST00000348225 CWC22Q9HCG8 908 aaKnown RBP22.18■■□□□ 1.14
PTN-201ENST00000348225 SLX4Q8IY92 1834 aa22.18■■□□□ 1.14
PTN-201ENST00000348225 LDHBP07195 334 aaKnown RBP22.17■■□□□ 1.14
PTN-201ENST00000348225 PRDX5P30044 214 aa22.17■■□□□ 1.14
PTN-201ENST00000348225 STOX1Q6ZVD7 989 aa22.17■■□□□ 1.14
PTN-201ENST00000348225 INTS4Q96HW7 963 aaKnown RBP22.17■■□□□ 1.14
PTN-201ENST00000348225 NAPBQ9H115 298 aa22.17■■□□□ 1.14
PTN-201ENST00000348225 SLC4A4Q9Y6R1 1079 aa22.17■■□□□ 1.14
PTN-201ENST00000348225 GSTO1P78417 241 aa22.17■■□□□ 1.14
PTN-201ENST00000348225 CC2D2BQ6DHV5 1058 aa22.17■■□□□ 1.14
PTN-201ENST00000348225 ADGRA1Q86SQ6 560 aa22.17■■□□□ 1.14
PTN-201ENST00000348225 IFNL3Q8IZI9 196 aa22.17■■□□□ 1.14
PTN-201ENST00000348225 TBC1D22AQ8WUA7 517 aa22.17■■□□□ 1.14
PTN-201ENST00000348225 SH2B1Q9NRF2 756 aaPredicted RBP22.17■■□□□ 1.14
PTN-201ENST00000348225 JAG2Q9Y219 1238 aa22.17■■□□□ 1.14
PTN-201ENST00000348225 HAND2P61296 217 aa22.16■■□□□ 1.14
PTN-201ENST00000348225 OLFM4Q6UX06 510 aa22.16■■□□□ 1.14
PTN-201ENST00000348225 KIF13BQ9NQT8 1826 aa22.16■■□□□ 1.14
PTN-201ENST00000348225 RIMBP2O15034 1052 aa22.15■■□□□ 1.14
PTN-201ENST00000348225 DHX32Q7L7V1 743 aaKnown RBP22.15■■□□□ 1.14
PTN-201ENST00000348225 ZNF384Q8TF68 577 aa22.15■■□□□ 1.14
PTN-201ENST00000348225 RIOK1Q9BRS2 568 aaKnown RBP22.15■■□□□ 1.14
PTN-201ENST00000348225 A0A0G2JLW4 131 aa22.14■■□□□ 1.14
PTN-201ENST00000348225 GSG1L2A8MUP6 293 aa22.14■■□□□ 1.14
PTN-201ENST00000348225 SOCS7O14512 581 aa22.14■■□□□ 1.14
PTN-201ENST00000348225 POLD1P28340 1107 aa22.14■■□□□ 1.14
PTN-201ENST00000348225 TDO2P48775 406 aa22.14■■□□□ 1.14
PTN-201ENST00000348225 MTFR1LQ9H019 292 aa22.14■■□□□ 1.14
PTN-201ENST00000348225 EPB41L4AQ9HCS5 686 aaPredicted RBP22.14■■□□□ 1.14
PTN-201ENST00000348225 FAM205AQ6ZU69 1335 aa22.14■■□□□ 1.13
PTN-201ENST00000348225 G3V3G9 751 aa22.13■■□□□ 1.13
PTN-201ENST00000348225 TRDNQ13061 729 aa22.13■■□□□ 1.13
PTN-201ENST00000348225 GRIPAP1Q4V328 841 aa22.13■■□□□ 1.13
PTN-201ENST00000348225 DCAF8Q5TAQ9 597 aa22.13■■□□□ 1.13
PTN-201ENST00000348225 RALYLQ86SE5 291 aaKnown RBP22.13■■□□□ 1.13
PTN-201ENST00000348225 NCOA7Q8NI08 942 aa22.13■■□□□ 1.13
PTN-201ENST00000348225 PRKAB2O43741 272 aa22.12■■□□□ 1.13
PTN-201ENST00000348225 ZBTB7AO95365 584 aa22.12■■□□□ 1.13
PTN-201ENST00000348225 LDHCP07864 332 aa22.12■■□□□ 1.13
PTN-201ENST00000348225 FGD1P98174 961 aa22.12■■□□□ 1.13
PTN-201ENST00000348225 TCEANC2Q96MN5 208 aa22.12■■□□□ 1.13
PTN-201ENST00000348225 TIAM2Q8IVF5 1701 aa22.11■■□□□ 1.13
PTN-201ENST00000348225 TOB2Q14106 344 aaPredicted RBP22.11■■□□□ 1.13
PTN-201ENST00000348225 GIMAP6Q6P9H5 292 aa22.11■■□□□ 1.13
PTN-201ENST00000348225 Q6ZUG5 572 aa22.11■■□□□ 1.13
PTN-201ENST00000348225 TTLL6Q8N841 843 aa22.11■■□□□ 1.13
PTN-201ENST00000348225 C7orf43Q8WVR3 580 aa22.11■■□□□ 1.13
PTN-201ENST00000348225 UPF1Q92900 1129 aaKnown RBP eCLIP22.11■■□□□ 1.13
PTN-201ENST00000348225 RTFDC1Q9BY42 306 aaPredicted RBP22.11■■□□□ 1.13
PTN-201ENST00000348225 CRNKL1Q9BZJ0 848 aaKnown RBP22.11■■□□□ 1.13
PTN-201ENST00000348225 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.11■■□□□ 1.13
PTN-201ENST00000348225 CHD4Q14839 1912 aa22.11■■□□□ 1.13
PTN-201ENST00000348225 DYNLL1P63167 89 aaKnown RBP22.1■■□□□ 1.13
PTN-201ENST00000348225 EXOSC10Q01780 885 aaKnown RBP22.1■■□□□ 1.13
PTN-201ENST00000348225 COL9A3Q14050 684 aaPredicted RBP22.1■■□□□ 1.13
PTN-201ENST00000348225 MFSD14BQ5SR56 506 aa22.1■■□□□ 1.13
PTN-201ENST00000348225 CERS3Q8IU89 383 aa22.1■■□□□ 1.13
PTN-201ENST00000348225 SLF2Q8IX21 1173 aa22.1■■□□□ 1.13
PTN-201ENST00000348225 SUPT20HQ8NEM7 779 aa22.1■■□□□ 1.13
PTN-201ENST00000348225 NOL10Q9BSC4 688 aaKnown RBP22.1■■□□□ 1.13
PTN-201ENST00000348225 ZNF219Q9P2Y4 722 aaPredicted RBP22.1■■□□□ 1.13
PTN-201ENST00000348225 LARP6Q9BRS8 491 aaKnown RBP22.09■■□□□ 1.13
PTN-201ENST00000348225 AATFQ9NY61 560 aaKnown RBP eCLIP22.09■■□□□ 1.13
PTN-201ENST00000348225 SUGT1Q9Y2Z0 365 aa22.09■■□□□ 1.13
PTN-201ENST00000348225 WDR19Q8NEZ3 1342 aa22.09■■□□□ 1.13
PTN-201ENST00000348225 BAG3O95817 575 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms