RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 TMX4Q9H1E5 349 aaPredicted RBP13.12□□□□□ -0.31
ECM1-201ENST00000346569 ALDH8A1Q9H2A2 487 aaPredicted RBP13.12□□□□□ -0.31
ECM1-201ENST00000346569 CTNNA3Q9UI47 895 aa13.12□□□□□ -0.31
ECM1-201ENST00000346569 SLX4Q8IY92 1834 aa13.11□□□□□ -0.31
ECM1-201ENST00000346569 RPAP1Q9BWH6 1393 aaPredicted RBP13.11□□□□□ -0.31
ECM1-201ENST00000346569 A0A0G2JLW4 131 aa13.11□□□□□ -0.31
ECM1-201ENST00000346569 DPEP1P16444 411 aa13.11□□□□□ -0.31
ECM1-201ENST00000346569 PRDX5P30044 214 aa13.11□□□□□ -0.31
ECM1-201ENST00000346569 MCM2P49736 904 aa13.11□□□□□ -0.31
ECM1-201ENST00000346569 MECOMQ03112 1051 aa13.11□□□□□ -0.31
ECM1-201ENST00000346569 COL9A3Q14050 684 aaPredicted RBP13.11□□□□□ -0.31
ECM1-201ENST00000346569 KRT32Q14532 448 aa13.11□□□□□ -0.31
ECM1-201ENST00000346569 TTLL5Q6EMB2 1281 aa13.11□□□□□ -0.31
ECM1-201ENST00000346569 RUFY3Q7L099 469 aa13.11□□□□□ -0.31
ECM1-201ENST00000346569 TTLL6Q8N841 843 aa13.11□□□□□ -0.31
ECM1-201ENST00000346569 AIDAQ96BJ3 306 aa13.11□□□□□ -0.31
ECM1-201ENST00000346569 JAKMIP1Q96N16 626 aaKnown RBP13.11□□□□□ -0.31
ECM1-201ENST00000346569 RIOK1Q9BRS2 568 aaKnown RBP13.11□□□□□ -0.31
ECM1-201ENST00000346569 PPP1R1BQ9UD71 204 aaPredicted RBP13.11□□□□□ -0.31
ECM1-201ENST00000346569 SNED1Q8TER0 1413 aa13.11□□□□□ -0.31
ECM1-201ENST00000346569 GSG1L2A8MUP6 293 aa13.1□□□□□ -0.31
ECM1-201ENST00000346569 RIMBP2O15034 1052 aa13.1□□□□□ -0.31
ECM1-201ENST00000346569 GNAT2P19087 354 aa13.1□□□□□ -0.31
ECM1-201ENST00000346569 CASTP20810 708 aaKnown RBP13.1□□□□□ -0.31
ECM1-201ENST00000346569 GRIK5Q16478 980 aa13.1□□□□□ -0.31
ECM1-201ENST00000346569 GRIPAP1Q4V328 841 aa13.1□□□□□ -0.31
ECM1-201ENST00000346569 NAA16Q6N069 864 aaPredicted RBP13.1□□□□□ -0.31
ECM1-201ENST00000346569 EYA3Q99504 573 aa13.1□□□□□ -0.31
ECM1-201ENST00000346569 ARMT1Q9H993 441 aa13.1□□□□□ -0.31
ECM1-201ENST00000346569 DUOX1Q9NRD9 1551 aa13.1□□□□□ -0.31
ECM1-201ENST00000346569 MBD4O95243 580 aa13.09□□□□□ -0.31
ECM1-201ENST00000346569 CPA1P15085 419 aa13.09□□□□□ -0.31
ECM1-201ENST00000346569 POLD1P28340 1107 aa13.09□□□□□ -0.31
ECM1-201ENST00000346569 STOX1Q6ZVD7 989 aa13.09□□□□□ -0.31
ECM1-201ENST00000346569 IFNL3Q8IZI9 196 aa13.09□□□□□ -0.31
ECM1-201ENST00000346569 LCORLQ8N3X6 602 aa13.09□□□□□ -0.31
ECM1-201ENST00000346569 NEK1Q96PY6 1258 aa13.09□□□□□ -0.31
ECM1-201ENST00000346569 JAG2Q9Y219 1238 aa13.09□□□□□ -0.31
ECM1-201ENST00000346569 CYP46A1Q9Y6A2 500 aa13.09□□□□□ -0.31
ECM1-201ENST00000346569 CACNA1SQ13698 1873 aa13.09□□□□□ -0.31
ECM1-201ENST00000346569 ZMYM6O95789 1325 aa13.09□□□□□ -0.31
ECM1-201ENST00000346569 PRKAB2O43741 272 aa13.08□□□□□ -0.32
ECM1-201ENST00000346569 LDHBP07195 334 aaKnown RBP13.08□□□□□ -0.32
ECM1-201ENST00000346569 RPS6KB1P23443 525 aa13.08□□□□□ -0.32
ECM1-201ENST00000346569 DDIT3P35638 169 aa13.08□□□□□ -0.32
ECM1-201ENST00000346569 CUL4AQ13619 759 aa13.08□□□□□ -0.32
ECM1-201ENST00000346569 PODNQ7Z5L7 613 aa13.08□□□□□ -0.32
ECM1-201ENST00000346569 MIGA1Q8NAN2 632 aa13.08□□□□□ -0.32
ECM1-201ENST00000346569 TBC1D22AQ8WUA7 517 aa13.08□□□□□ -0.32
ECM1-201ENST00000346569 FAM163AQ96GL9 167 aaPredicted RBP13.08□□□□□ -0.32
ECM1-201ENST00000346569 EPB41L4AQ9HCS5 686 aaPredicted RBP13.08□□□□□ -0.32
ECM1-201ENST00000346569 MAGEB6P1A0A0J9YX57 407 aa13.07□□□□□ -0.32
ECM1-201ENST00000346569 E7EWF7 191 aa13.07□□□□□ -0.32
ECM1-201ENST00000346569 C21orf2O43822 256 aa13.07□□□□□ -0.32
ECM1-201ENST00000346569 AK2P54819 239 aa13.07□□□□□ -0.32
ECM1-201ENST00000346569 PPP4CP60510 307 aa13.07□□□□□ -0.32
ECM1-201ENST00000346569 DYNLL1P63167 89 aaKnown RBP13.07□□□□□ -0.32
ECM1-201ENST00000346569 EXOSC10Q01780 885 aaKnown RBP13.07□□□□□ -0.32
ECM1-201ENST00000346569 IMMTQ16891 758 aaKnown RBP13.07□□□□□ -0.32
ECM1-201ENST00000346569 BLOC1S2Q6QNY1 142 aa13.07□□□□□ -0.32
ECM1-201ENST00000346569 TMX3Q96JJ7 454 aa13.07□□□□□ -0.32
ECM1-201ENST00000346569 PDRG1Q9NUG6 133 aa13.07□□□□□ -0.32
ECM1-201ENST00000346569 ZNF219Q9P2Y4 722 aaPredicted RBP13.07□□□□□ -0.32
ECM1-201ENST00000346569 KIF13BQ9NQT8 1826 aa13.06□□□□□ -0.32
ECM1-201ENST00000346569 ZNF213O14771 459 aa13.06□□□□□ -0.32
ECM1-201ENST00000346569 LDHCP07864 332 aa13.06□□□□□ -0.32
ECM1-201ENST00000346569 GTF2IP78347 998 aa13.06□□□□□ -0.32
ECM1-201ENST00000346569 DOK7Q18PE1 504 aa13.06□□□□□ -0.32
ECM1-201ENST00000346569 GIMAP6Q6P9H5 292 aa13.06□□□□□ -0.32
ECM1-201ENST00000346569 SPRYD3Q8NCJ5 442 aa13.06□□□□□ -0.32
ECM1-201ENST00000346569 SUGT1Q9Y2Z0 365 aa13.06□□□□□ -0.32
ECM1-201ENST00000346569 SLC4A4Q9Y6R1 1079 aa13.06□□□□□ -0.32
ECM1-201ENST00000346569 APPP05067 770 aa13.05□□□□□ -0.32
ECM1-201ENST00000346569 HMGB1P09429 215 aaKnown RBP13.05□□□□□ -0.32
ECM1-201ENST00000346569 KIAA2012Q0VF49 1180 aa13.05□□□□□ -0.32
ECM1-201ENST00000346569 MFSD14BQ5SR56 506 aa13.05□□□□□ -0.32
ECM1-201ENST00000346569 RTKN2Q8IZC4 609 aa13.05□□□□□ -0.32
ECM1-201ENST00000346569 SUPT20HQ8NEM7 779 aa13.05□□□□□ -0.32
ECM1-201ENST00000346569 PSMD1Q99460 953 aa13.05□□□□□ -0.32
ECM1-201ENST00000346569 AGXT2Q9BYV1 514 aa13.05□□□□□ -0.32
ECM1-201ENST00000346569 FHDC1Q9C0D6 1143 aaPredicted RBP13.05□□□□□ -0.32
ECM1-201ENST00000346569 NBPF3Q9H094 633 aa13.05□□□□□ -0.32
ECM1-201ENST00000346569 PIM2Q9P1W9 311 aa13.05□□□□□ -0.32
ECM1-201ENST00000346569 LIMCH1Q9UPQ0 1083 aa13.05□□□□□ -0.32
ECM1-201ENST00000346569 CD2APQ9Y5K6 639 aa13.05□□□□□ -0.32
ECM1-201ENST00000346569 CHD4Q14839 1912 aa13.05□□□□□ -0.32
ECM1-201ENST00000346569 GSTO1P78417 241 aa13.05□□□□□ -0.32
ECM1-201ENST00000346569 TOB2Q14106 344 aaPredicted RBP13.05□□□□□ -0.32
ECM1-201ENST00000346569 CCDC93Q567U6 631 aa13.05□□□□□ -0.32
ECM1-201ENST00000346569 DHX32Q7L7V1 743 aaKnown RBP13.05□□□□□ -0.32
ECM1-201ENST00000346569 DZIP1Q86YF9 867 aaKnown RBP13.05□□□□□ -0.32
ECM1-201ENST00000346569 FBXL16Q8N461 479 aa13.05□□□□□ -0.32
ECM1-201ENST00000346569 CERS5Q8N5B7 392 aa13.05□□□□□ -0.32
ECM1-201ENST00000346569 SYT17Q9BSW7 474 aa13.05□□□□□ -0.32
ECM1-201ENST00000346569 VPS33BQ9H267 617 aa13.05□□□□□ -0.32
ECM1-201ENST00000346569 KCNQ5Q9NR82 932 aa13.05□□□□□ -0.32
ECM1-201ENST00000346569 MYH13Q9UKX3 1938 aa13.04□□□□□ -0.32
ECM1-201ENST00000346569 GPR75-ASB3A0A0A6YYF3 556 aa13.04□□□□□ -0.32
ECM1-201ENST00000346569 HAND2P61296 217 aa13.04□□□□□ -0.32
ECM1-201ENST00000346569 FKBP1AP62942 108 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms