RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 SLC4A4Q9Y6R1 1079 aa12.41□□□□□ -0.42
CLCN6-202ENST00000346436 MAPK8IP2Q13387 824 aaPredicted RBP12.41□□□□□ -0.42
CLCN6-202ENST00000346436 PRIMPOLQ96LW4 560 aa12.41□□□□□ -0.42
CLCN6-202ENST00000346436 SHROOM2Q13796 1616 aa12.41□□□□□ -0.42
CLCN6-202ENST00000346436 DKC1O60832 514 aaKnown RBP eCLIP12.41□□□□□ -0.426e-6■■■□□ 15
CLCN6-202ENST00000346436 ZNF853P0CG23 659 aa12.41□□□□□ -0.42
CLCN6-202ENST00000346436 RXRAP19793 462 aa12.41□□□□□ -0.42
CLCN6-202ENST00000346436 TMEM2Q9UHN6 1383 aa12.41□□□□□ -0.42
CLCN6-202ENST00000346436 SKILP12757 684 aa12.41□□□□□ -0.42
CLCN6-202ENST00000346436 FKBP15Q5T1M5 1219 aa12.41□□□□□ -0.42
CLCN6-202ENST00000346436 HACE1Q8IYU2 909 aa12.41□□□□□ -0.42
CLCN6-202ENST00000346436 NCOA7Q8NI08 942 aa12.41□□□□□ -0.42
CLCN6-202ENST00000346436 ERCC4Q92889 916 aaPredicted RBP12.41□□□□□ -0.42
CLCN6-202ENST00000346436 NAP1L4Q99733 375 aaKnown RBP12.41□□□□□ -0.42
CLCN6-202ENST00000346436 UBXN4Q92575 508 aa12.4□□□□□ -0.42
CLCN6-202ENST00000346436 NCOA5Q9HCD5 579 aaKnown RBP12.4□□□□□ -0.42
CLCN6-202ENST00000346436 EZRP15311 586 aaKnown RBP12.4□□□□□ -0.42
CLCN6-202ENST00000346436 SLC4A8Q2Y0W8 1093 aa12.4□□□□□ -0.42
CLCN6-202ENST00000346436 ARMC9Q7Z3E5 817 aa12.4□□□□□ -0.42
CLCN6-202ENST00000346436 IMPG2Q9BZV3 1241 aa12.4□□□□□ -0.42
CLCN6-202ENST00000346436 CTAGE5O15320 804 aa12.4□□□□□ -0.42
CLCN6-202ENST00000346436 TIMM10P62072 90 aa12.4□□□□□ -0.42
CLCN6-202ENST00000346436 MSL1Q68DK7 614 aa12.4□□□□□ -0.42
CLCN6-202ENST00000346436 TCHPQ9BT92 498 aa12.4□□□□□ -0.42
CLCN6-202ENST00000346436 TET3O43151 1660 aa12.4□□□□□ -0.42
CLCN6-202ENST00000346436 ERBB4Q15303 1308 aa12.4□□□□□ -0.42
CLCN6-202ENST00000346436 E9PCH4 1651 aa12.4□□□□□ -0.42
CLCN6-202ENST00000346436 JAK2O60674 1132 aa12.4□□□□□ -0.42
CLCN6-202ENST00000346436 LTKP29376 864 aa12.4□□□□□ -0.42
CLCN6-202ENST00000346436 HIBADHP31937 336 aaKnown RBP12.4□□□□□ -0.42
CLCN6-202ENST00000346436 EIF5P55010 431 aaKnown RBP12.4□□□□□ -0.42
CLCN6-202ENST00000346436 HSP90B2PQ58FF3 399 aa12.4□□□□□ -0.42
CLCN6-202ENST00000346436 SPOUT1Q5T280 376 aaKnown RBP12.4□□□□□ -0.42
CLCN6-202ENST00000346436 RASEFQ8IZ41 740 aa12.4□□□□□ -0.42
CLCN6-202ENST00000346436 CNNM3Q8NE01 707 aa12.4□□□□□ -0.42
CLCN6-202ENST00000346436 PNMA2Q9UL42 364 aa12.4□□□□□ -0.42
CLCN6-202ENST00000346436 KIAA0232Q92628 1395 aa12.4□□□□□ -0.42
CLCN6-202ENST00000346436 TRIM37O94972 964 aa12.4□□□□□ -0.43
CLCN6-202ENST00000346436 CALM1P0DP23 149 aa12.4□□□□□ -0.43
CLCN6-202ENST00000346436 CALM2P0DP24 149 aa12.4□□□□□ -0.43
CLCN6-202ENST00000346436 CALM3P0DP25 149 aa12.4□□□□□ -0.43
CLCN6-202ENST00000346436 TOP1P11387 765 aaKnown RBP12.4□□□□□ -0.43
CLCN6-202ENST00000346436 ME3Q16798 604 aa12.4□□□□□ -0.43
CLCN6-202ENST00000346436 TEX11Q8IYF3 940 aa12.4□□□□□ -0.43
CLCN6-202ENST00000346436 ZNF526Q8TF50 670 aaPredicted RBP12.4□□□□□ -0.43
CLCN6-202ENST00000346436 PTPDC1A2A3K4 754 aa12.39□□□□□ -0.43
CLCN6-202ENST00000346436 ZSCAN16Q9H4T2 348 aaPredicted RBP12.39□□□□□ -0.43
CLCN6-202ENST00000346436 PAG1Q9NWQ8 432 aa12.39□□□□□ -0.43
CLCN6-202ENST00000346436 COMMD10Q9Y6G5 202 aa12.39□□□□□ -0.43
CLCN6-202ENST00000346436 SPHKAPQ2M3C7 1700 aa12.39□□□□□ -0.43
CLCN6-202ENST00000346436 PRC1O43663 620 aa12.39□□□□□ -0.43
CLCN6-202ENST00000346436 DBNDD2Q9BQY9 259 aa12.39□□□□□ -0.43
CLCN6-202ENST00000346436 BACH1O14867 736 aa12.39□□□□□ -0.43
CLCN6-202ENST00000346436 TMC4Q7Z404 712 aa12.39□□□□□ -0.43
CLCN6-202ENST00000346436 CCNA1P78396 465 aa12.39□□□□□ -0.43
CLCN6-202ENST00000346436 WTAPQ15007 396 aa12.39□□□□□ -0.43
CLCN6-202ENST00000346436 IFIT1BQ5T764 474 aaKnown RBP12.39□□□□□ -0.43
CLCN6-202ENST00000346436 EP400NLQ6ZTU2 488 aa12.39□□□□□ -0.43
CLCN6-202ENST00000346436 RPS6KB1P23443 525 aa12.38□□□□□ -0.43
CLCN6-202ENST00000346436 CC2D2BQ6DHV5 1058 aa12.38□□□□□ -0.43
CLCN6-202ENST00000346436 TRERF1Q96PN7 1200 aa12.38□□□□□ -0.43
CLCN6-202ENST00000346436 MCM9Q9NXL9 1143 aa12.38□□□□□ -0.43
CLCN6-202ENST00000346436 IQSEC3Q9UPP2 1182 aaPredicted RBP12.38□□□□□ -0.43
CLCN6-202ENST00000346436 ABCA6Q8N139 1617 aa12.38□□□□□ -0.43
CLCN6-202ENST00000346436 NOP56O00567 594 aaKnown RBP12.38□□□□□ -0.43
CLCN6-202ENST00000346436 IARSP41252 1262 aaKnown RBP12.38□□□□□ -0.43
CLCN6-202ENST00000346436 EIF4A1P60842 406 aaKnown RBP12.38□□□□□ -0.43
CLCN6-202ENST00000346436 PPP1R9BQ96SB3 815 aa12.38□□□□□ -0.43
CLCN6-202ENST00000346436 SLC26A6Q9BXS9 759 aa12.38□□□□□ -0.43
CLCN6-202ENST00000346436 POLR3GO15318 223 aaPredicted RBP12.38□□□□□ -0.43
CLCN6-202ENST00000346436 PHACTR2O75167 634 aa12.38□□□□□ -0.43
CLCN6-202ENST00000346436 METAP2P50579 478 aaKnown RBP eCLIP12.38□□□□□ -0.43
CLCN6-202ENST00000346436 SETQ01105 290 aaPredicted RBP12.38□□□□□ -0.43
CLCN6-202ENST00000346436 SNW1Q13573 536 aaKnown RBP12.38□□□□□ -0.43
CLCN6-202ENST00000346436 PRKG1Q13976 671 aa12.38□□□□□ -0.43
CLCN6-202ENST00000346436 ADCK5Q3MIX3 580 aa12.38□□□□□ -0.43
CLCN6-202ENST00000346436 TRMT1LQ7Z2T5 733 aaKnown RBP12.38□□□□□ -0.43
CLCN6-202ENST00000346436 ZSWIM4Q9H7M6 989 aa12.38□□□□□ -0.43
CLCN6-202ENST00000346436 FAM135BQ49AJ0 1406 aa12.38□□□□□ -0.43
CLCN6-202ENST00000346436 ERVV-2B6SEH9 535 aa12.38□□□□□ -0.43
CLCN6-202ENST00000346436 PRR36Q9H6K5 1346 aa12.38□□□□□ -0.43
CLCN6-202ENST00000346436 PDE8AO60658 829 aa12.37□□□□□ -0.43
CLCN6-202ENST00000346436 DALRD3Q5D0E6 543 aaKnown RBP12.37□□□□□ -0.43
CLCN6-202ENST00000346436 TAF4BQ92750 862 aa12.37□□□□□ -0.43
CLCN6-202ENST00000346436 A0A1B0GVL5 298 aa12.37□□□□□ -0.43
CLCN6-202ENST00000346436 BMP15O95972 392 aa12.37□□□□□ -0.43
CLCN6-202ENST00000346436 GRIPAP1Q4V328 841 aa12.37□□□□□ -0.43
CLCN6-202ENST00000346436 RRP36Q96EU6 259 aaKnown RBP12.37□□□□□ -0.43
CLCN6-202ENST00000346436 ZNF594Q96JF6 807 aaPredicted RBP12.37□□□□□ -0.43
CLCN6-202ENST00000346436 IBTKQ9P2D0 1353 aaPredicted RBP12.37□□□□□ -0.43
CLCN6-202ENST00000346436 GRIN3BO60391 1043 aa12.37□□□□□ -0.43
CLCN6-202ENST00000346436 SUPT20HL1Q3ZLR7 823 aa12.37□□□□□ -0.43
CLCN6-202ENST00000346436 SSH3Q8TE77 659 aa12.37□□□□□ -0.43
CLCN6-202ENST00000346436 SPON1Q9HCB6 807 aa12.37□□□□□ -0.43
CLCN6-202ENST00000346436 KIF24Q5T7B8 1368 aa12.37□□□□□ -0.43
CLCN6-202ENST00000346436 GBP2P32456 591 aaPredicted RBP12.37□□□□□ -0.43
CLCN6-202ENST00000346436 MRPS27Q92552 414 aaKnown RBP12.37□□□□□ -0.43
CLCN6-202ENST00000346436 UBA7P41226 1012 aa12.36□□□□□ -0.43
CLCN6-202ENST00000346436 ELMSAN1Q6PJG2 1045 aa12.36□□□□□ -0.43
CLCN6-202ENST00000346436 SEPT12Q8IYM1 358 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms