RNA–Protein interactions for RNA: ENST00000343253.11

CCDC18-201, Transcript of coiled-coil domain containing 18, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC18, Length 4,867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-201ENST00000343253 BICDL1Q6ZP65 573 aa12.17□□□□□ -0.46
CCDC18-201ENST00000343253 SND1Q7KZF4 910 aaKnown RBP eCLIP12.17□□□□□ -0.46
CCDC18-201ENST00000343253 RGS22Q8NE09 1264 aa12.17□□□□□ -0.46
CCDC18-201ENST00000343253 CLSTN2Q9H4D0 955 aa12.17□□□□□ -0.46
CCDC18-201ENST00000343253 LARSQ9P2J5 1176 aaKnown RBP12.17□□□□□ -0.46
CCDC18-201ENST00000343253 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.17□□□□□ -0.46
CCDC18-201ENST00000343253 TOPBP1Q92547 1522 aa12.17□□□□□ -0.46
CCDC18-201ENST00000343253 HSPA1LP34931 641 aa12.17□□□□□ -0.46
CCDC18-201ENST00000343253 MAP3K21Q5TCX8 1036 aa12.17□□□□□ -0.46
CCDC18-201ENST00000343253 PLCB1Q9NQ66 1216 aa12.17□□□□□ -0.46
CCDC18-201ENST00000343253 E7EVH7 732 aa12.17□□□□□ -0.46
CCDC18-201ENST00000343253 ANKRD20A3Q5VUR7 823 aa12.17□□□□□ -0.46
CCDC18-201ENST00000343253 KRT79Q5XKE5 535 aa12.17□□□□□ -0.46
CCDC18-201ENST00000343253 NUP58Q9BVL2 599 aa12.17□□□□□ -0.46
CCDC18-201ENST00000343253 LRRC2Q9BYS8 371 aa12.17□□□□□ -0.46
CCDC18-201ENST00000343253 RAD50Q92878 1312 aa12.17□□□□□ -0.46
CCDC18-201ENST00000343253 EPRSP07814 1512 aaKnown RBP12.16□□□□□ -0.46
CCDC18-201ENST00000343253 STMN1P16949 149 aa12.16□□□□□ -0.46
CCDC18-201ENST00000343253 MLKLQ8NB16 471 aa12.16□□□□□ -0.46
CCDC18-201ENST00000343253 SMARCC2Q8TAQ2 1214 aa12.16□□□□□ -0.46
CCDC18-201ENST00000343253 TTC41PQ6P2S7 1318 aa12.16□□□□□ -0.46
CCDC18-201ENST00000343253 ZBTB9Q96C00 473 aa12.16□□□□□ -0.46
CCDC18-201ENST00000343253 NOX5Q96PH1 765 aa12.16□□□□□ -0.46
CCDC18-201ENST00000343253 DCTPP1Q9H773 170 aa12.16□□□□□ -0.46
CCDC18-201ENST00000343253 ATP8B1O43520 1251 aa12.16□□□□□ -0.46
CCDC18-201ENST00000343253 BAG3O95817 575 aa12.16□□□□□ -0.46
CCDC18-201ENST00000343253 HMGB2P26583 209 aaKnown RBP12.16□□□□□ -0.46
CCDC18-201ENST00000343253 ERCC5P28715 1186 aaPredicted RBP12.16□□□□□ -0.46
CCDC18-201ENST00000343253 MSANTD4Q8NCY6 345 aa12.16□□□□□ -0.46
CCDC18-201ENST00000343253 USP26Q9BXU7 913 aa12.16□□□□□ -0.46
CCDC18-201ENST00000343253 CBX8Q9HC52 389 aa12.16□□□□□ -0.46
CCDC18-201ENST00000343253 FAN1Q9Y2M0 1017 aa12.16□□□□□ -0.46
CCDC18-201ENST00000343253 PTPDC1A2A3K4 754 aa12.16□□□□□ -0.46
CCDC18-201ENST00000343253 RPL13P26373 211 aaKnown RBP12.16□□□□□ -0.46
CCDC18-201ENST00000343253 TRPC3Q13507 836 aa12.16□□□□□ -0.46
CCDC18-201ENST00000343253 LDHAL6AQ6ZMR3 332 aa12.16□□□□□ -0.46
CCDC18-201ENST00000343253 SECISBP2LQ93073 1101 aaKnown RBP12.16□□□□□ -0.46
CCDC18-201ENST00000343253 RAB3IPQ96QF0 476 aaPredicted RBP12.16□□□□□ -0.46
CCDC18-201ENST00000343253 CALM1P0DP23 149 aa12.15□□□□□ -0.46
CCDC18-201ENST00000343253 CALM2P0DP24 149 aa12.15□□□□□ -0.46
CCDC18-201ENST00000343253 CALM3P0DP25 149 aa12.15□□□□□ -0.46
CCDC18-201ENST00000343253 DHX32Q7L7V1 743 aaKnown RBP12.15□□□□□ -0.46
CCDC18-201ENST00000343253 MIER3Q7Z3K6 550 aa12.15□□□□□ -0.46
CCDC18-201ENST00000343253 CCDC170Q8IYT3 715 aa12.15□□□□□ -0.46
CCDC18-201ENST00000343253 SNRKQ9NRH2 765 aa12.15□□□□□ -0.46
CCDC18-201ENST00000343253 RPRD2Q5VT52 1461 aaKnown RBP12.15□□□□□ -0.46
CCDC18-201ENST00000343253 LRRD1A4D1F6 860 aa12.15□□□□□ -0.46
CCDC18-201ENST00000343253 HMGB1P1B2RPK0 211 aaPredicted RBP12.15□□□□□ -0.46
CCDC18-201ENST00000343253 TXNDC9O14530 226 aa12.15□□□□□ -0.46
CCDC18-201ENST00000343253 ATP8B2P98198 1209 aa12.15□□□□□ -0.46
CCDC18-201ENST00000343253 MUM1Q2TAK8 710 aa12.15□□□□□ -0.46
CCDC18-201ENST00000343253 BCAS4Q8TDM0 211 aa12.15□□□□□ -0.46
CCDC18-201ENST00000343253 PSMD1Q99460 953 aa12.15□□□□□ -0.46
CCDC18-201ENST00000343253 GRIN2BQ13224 1484 aa12.15□□□□□ -0.46
CCDC18-201ENST00000343253 PDE1CQ14123 709 aaPredicted RBP12.15□□□□□ -0.46
CCDC18-201ENST00000343253 KRT71Q3SY84 523 aa12.15□□□□□ -0.46
CCDC18-201ENST00000343253 SLC9C1Q4G0N8 1177 aa12.15□□□□□ -0.46
CCDC18-201ENST00000343253 LEO1Q8WVC0 666 aaPredicted RBP12.15□□□□□ -0.46
CCDC18-201ENST00000343253 MEIS3Q99687 375 aa12.15□□□□□ -0.46
CCDC18-201ENST00000343253 EFCC1Q9HA90 598 aa12.15□□□□□ -0.46
CCDC18-201ENST00000343253 VAT1LQ9HCJ6 419 aa12.15□□□□□ -0.46
CCDC18-201ENST00000343253 EFCAB8A8MWE9 144 aa12.15□□□□□ -0.47
CCDC18-201ENST00000343253 CFAP221Q4G0U5 840 aa12.15□□□□□ -0.47
CCDC18-201ENST00000343253 HHATQ5VTY9 493 aa12.15□□□□□ -0.47
CCDC18-201ENST00000343253 TSPYL2Q9H2G4 693 aaPredicted RBP12.15□□□□□ -0.47
CCDC18-201ENST00000343253 TACC3Q9Y6A5 838 aa12.15□□□□□ -0.47
CCDC18-201ENST00000343253 PI4KAP2A4QPH2 592 aa12.14□□□□□ -0.47
CCDC18-201ENST00000343253 TMEM110-MUSTN1A8MSY1 372 aa12.14□□□□□ -0.47
CCDC18-201ENST00000343253 IFIT1BQ5T764 474 aaKnown RBP12.14□□□□□ -0.47
CCDC18-201ENST00000343253 RASIP1Q5U651 963 aa12.14□□□□□ -0.47
CCDC18-201ENST00000343253 PI4KAP1Q8N8J0 262 aa12.14□□□□□ -0.47
CCDC18-201ENST00000343253 MBIPQ9NS73 344 aa12.14□□□□□ -0.47
CCDC18-201ENST00000343253 RIPOR2Q9Y4F9 1068 aa12.14□□□□□ -0.47
CCDC18-201ENST00000343253 SAMM50Q9Y512 469 aa12.14□□□□□ -0.47
CCDC18-201ENST00000343253 HSP90AA5PQ58FG0 334 aa12.14□□□□□ -0.47
CCDC18-201ENST00000343253 RUFY3Q7L099 469 aa12.14□□□□□ -0.47
CCDC18-201ENST00000343253 C17orf53Q8N3J3 647 aaPredicted RBP12.14□□□□□ -0.47
CCDC18-201ENST00000343253 STAG1Q8WVM7 1258 aa12.14□□□□□ -0.47
CCDC18-201ENST00000343253 NUDT16Q96DE0 195 aaKnown RBP12.14□□□□□ -0.47
CCDC18-201ENST00000343253 RABEP2Q9H5N1 569 aa12.14□□□□□ -0.47
CCDC18-201ENST00000343253 HOMER3Q9NSC5 361 aa12.14□□□□□ -0.47
CCDC18-201ENST00000343253 ABCC5O15440 1437 aa12.14□□□□□ -0.47
CCDC18-201ENST00000343253 A0A1B0GVL5 298 aa12.14□□□□□ -0.47
CCDC18-201ENST00000343253 MGEA5O60502 916 aa12.14□□□□□ -0.47
CCDC18-201ENST00000343253 GJC1P36383 396 aa12.14□□□□□ -0.47
CCDC18-201ENST00000343253 GNGT1P63211 74 aa12.14□□□□□ -0.47
CCDC18-201ENST00000343253 PTPRKQ15262 1439 aa12.14□□□□□ -0.47
CCDC18-201ENST00000343253 FAM71BQ8TC56 605 aa12.14□□□□□ -0.47
CCDC18-201ENST00000343253 PTPN23Q9H3S7 1636 aa12.14□□□□□ -0.47
CCDC18-201ENST00000343253 GOLGA8KD6RF30 607 aa12.14□□□□□ -0.47
CCDC18-201ENST00000343253 PEX19P40855 299 aa12.14□□□□□ -0.47
CCDC18-201ENST00000343253 LIG3P49916 1009 aa12.14□□□□□ -0.47
CCDC18-201ENST00000343253 ETF1P62495 437 aaKnown RBP12.14□□□□□ -0.47
CCDC18-201ENST00000343253 RILPL1Q5EBL4 403 aa12.14□□□□□ -0.47
CCDC18-201ENST00000343253 TACO1Q9BSH4 297 aaKnown RBP12.14□□□□□ -0.47
CCDC18-201ENST00000343253 HECW1Q76N89 1606 aa12.13□□□□□ -0.47
CCDC18-201ENST00000343253 KRT9P35527 623 aa12.13□□□□□ -0.47
CCDC18-201ENST00000343253 CREB3L3Q68CJ9 461 aa12.13□□□□□ -0.47
CCDC18-201ENST00000343253 KLHL14Q9P2G3 628 aa12.13□□□□□ -0.47
CCDC18-201ENST00000343253 TRMT112Q9UI30 125 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms