RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 LMBR1Q8WVP7 490 aa16.96■□□□□ 0.31
UBE3B-202ENST00000342494 PLIN2Q99541 437 aa16.96■□□□□ 0.31
UBE3B-202ENST00000342494 RAD50Q92878 1312 aa16.96■□□□□ 0.31
UBE3B-202ENST00000342494 KLHL40Q2TBA0 621 aa16.96■□□□□ 0.31
UBE3B-202ENST00000342494 LETM2Q2VYF4 491 aa16.96■□□□□ 0.31
UBE3B-202ENST00000342494 HARSP12081 509 aaKnown RBP16.96■□□□□ 0.31
UBE3B-202ENST00000342494 PRKG1Q13976 671 aa16.96■□□□□ 0.31
UBE3B-202ENST00000342494 MICALCLQ6ZW33 695 aa16.96■□□□□ 0.31
UBE3B-202ENST00000342494 WDR66Q8TBY9 1149 aa16.96■□□□□ 0.31
UBE3B-202ENST00000342494 METTL22Q9BUU2 404 aaPredicted RBP16.96■□□□□ 0.31
UBE3B-202ENST00000342494 HELLSQ9NRZ9 838 aa16.96■□□□□ 0.31
UBE3B-202ENST00000342494 CGNQ9P2M7 1197 aaKnown RBP16.96■□□□□ 0.31
UBE3B-202ENST00000342494 CCDC50Q8IVM0 306 aa16.95■□□□□ 0.3
UBE3B-202ENST00000342494 DCTPP1Q9H773 170 aa16.95■□□□□ 0.3
UBE3B-202ENST00000342494 EIF4G3O43432 1585 aaKnown RBP16.95■□□□□ 0.3
UBE3B-202ENST00000342494 TACC1O75410 805 aa16.95■□□□□ 0.3
UBE3B-202ENST00000342494 TIMM10P62072 90 aa16.95■□□□□ 0.3
UBE3B-202ENST00000342494 DNM1Q05193 864 aaKnown RBP16.95■□□□□ 0.3
UBE3B-202ENST00000342494 NEK11Q8NG66 645 aa16.95■□□□□ 0.3
UBE3B-202ENST00000342494 A0A1W2PP64 1363 aa16.95■□□□□ 0.3
UBE3B-202ENST00000342494 USP48Q86UV5 1035 aa16.95■□□□□ 0.3
UBE3B-202ENST00000342494 AOPEPQ8N6M6 819 aa16.95■□□□□ 0.3
UBE3B-202ENST00000342494 CEP63Q96MT8 703 aa16.95■□□□□ 0.3
UBE3B-202ENST00000342494 POLR3GO15318 223 aaPredicted RBP16.95■□□□□ 0.3
UBE3B-202ENST00000342494 RPL13P26373 211 aaKnown RBP16.95■□□□□ 0.3
UBE3B-202ENST00000342494 SPECC1LQ69YQ0 1117 aa16.95■□□□□ 0.3
UBE3B-202ENST00000342494 ATP2A1O14983 1001 aa16.94■□□□□ 0.3
UBE3B-202ENST00000342494 IQUBQ8NA54 791 aa16.94■□□□□ 0.3
UBE3B-202ENST00000342494 PRAG1Q86YV5 1406 aa16.94■□□□□ 0.3
UBE3B-202ENST00000342494 NOP56O00567 594 aaKnown RBP16.94■□□□□ 0.3
UBE3B-202ENST00000342494 BRAPQ7Z569 592 aa16.94■□□□□ 0.3
UBE3B-202ENST00000342494 NIM1KQ8IY84 436 aa16.94■□□□□ 0.3
UBE3B-202ENST00000342494 FNBP1Q96RU3 617 aa16.94■□□□□ 0.3
UBE3B-202ENST00000342494 CHMP2AO43633 222 aa16.94■□□□□ 0.3
UBE3B-202ENST00000342494 BIRC3Q13489 604 aa16.94■□□□□ 0.3
UBE3B-202ENST00000342494 CCDC65Q8IXS2 484 aa16.94■□□□□ 0.3
UBE3B-202ENST00000342494 ARMT1Q9H993 441 aa16.94■□□□□ 0.3
UBE3B-202ENST00000342494 RNF216Q9NWF9 866 aaPredicted RBP16.94■□□□□ 0.3
UBE3B-202ENST00000342494 NDC80O14777 642 aa16.93■□□□□ 0.3
UBE3B-202ENST00000342494 AK2P54819 239 aa16.93■□□□□ 0.3
UBE3B-202ENST00000342494 CCDC77Q9BR77 488 aa16.93■□□□□ 0.3
UBE3B-202ENST00000342494 ZSCAN23Q3MJ62 389 aa16.93■□□□□ 0.3
UBE3B-202ENST00000342494 CCDC42Q96M95 316 aa16.93■□□□□ 0.3
UBE3B-202ENST00000342494 CERS3Q8IU89 383 aa16.93■□□□□ 0.3
UBE3B-202ENST00000342494 GINS2Q9Y248 185 aa16.93■□□□□ 0.3
UBE3B-202ENST00000342494 STX17P56962 302 aa16.93■□□□□ 0.3
UBE3B-202ENST00000342494 CEP135Q66GS9 1140 aa16.93■□□□□ 0.3
UBE3B-202ENST00000342494 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.93■□□□□ 0.3
UBE3B-202ENST00000342494 HSF2BPO75031 334 aa16.93■□□□□ 0.3
UBE3B-202ENST00000342494 CCDC24Q8N4L8 307 aa16.93■□□□□ 0.3
UBE3B-202ENST00000342494 A1BGP04217 495 aa16.92■□□□□ 0.3
UBE3B-202ENST00000342494 SMTNP53814 917 aa16.92■□□□□ 0.3
UBE3B-202ENST00000342494 SV2BQ7L1I2 683 aa16.92■□□□□ 0.3
UBE3B-202ENST00000342494 FAM200AQ8TCP9 573 aa16.92■□□□□ 0.3
UBE3B-202ENST00000342494 FRMD4BQ9Y2L6 1034 aa16.92■□□□□ 0.3
UBE3B-202ENST00000342494 DCAF17Q5H9S7 520 aaPredicted RBP16.92■□□□□ 0.3
UBE3B-202ENST00000342494 DNAJC25Q9H1X3 360 aa16.92■□□□□ 0.3
UBE3B-202ENST00000342494 B4E1Z4 1266 aa16.92■□□□□ 0.3
UBE3B-202ENST00000342494 KRT83P78385 493 aa16.92■□□□□ 0.3
UBE3B-202ENST00000342494 UBXN1Q04323 297 aa16.92■□□□□ 0.3
UBE3B-202ENST00000342494 KIF5AQ12840 1032 aa16.92■□□□□ 0.3
UBE3B-202ENST00000342494 RUFY3Q7L099 469 aa16.92■□□□□ 0.3
UBE3B-202ENST00000342494 XAGE2Q96GT9 111 aa16.92■□□□□ 0.3
UBE3B-202ENST00000342494 CCDC169A6NNP5 214 aa16.92■□□□□ 0.3
UBE3B-202ENST00000342494 CCT6AP40227 531 aaKnown RBP16.92■□□□□ 0.3
UBE3B-202ENST00000342494 TCIRG1Q13488 830 aa16.92■□□□□ 0.3
UBE3B-202ENST00000342494 SLC52A2Q9HAB3 445 aa16.92■□□□□ 0.3
UBE3B-202ENST00000342494 SLAIN2Q9P270 581 aa16.92■□□□□ 0.3
UBE3B-202ENST00000342494 SLC8A3P57103 927 aa16.91■□□□□ 0.3
UBE3B-202ENST00000342494 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.91■□□□□ 0.3
UBE3B-202ENST00000342494 ATP6V0A2Q9Y487 856 aa16.91■□□□□ 0.3
UBE3B-202ENST00000342494 VWA3AA6NCI4 1184 aa16.91■□□□□ 0.3
UBE3B-202ENST00000342494 MYCLP12524 364 aaPredicted RBP16.91■□□□□ 0.3
UBE3B-202ENST00000342494 WDR44Q5JSH3 913 aa16.91■□□□□ 0.3
UBE3B-202ENST00000342494 BICRAQ9NZM4 1560 aa16.91■□□□□ 0.3
UBE3B-202ENST00000342494 ZBED4O75132 1171 aa16.91■□□□□ 0.3
UBE3B-202ENST00000342494 ZNF174Q15697 407 aa16.91■□□□□ 0.3
UBE3B-202ENST00000342494 TNNI3KQ59H18 835 aa16.91■□□□□ 0.3
UBE3B-202ENST00000342494 RAB3IL1Q8TBN0 382 aa16.91■□□□□ 0.3
UBE3B-202ENST00000342494 FPGT-TNNI3KV9GXZ4 949 aa16.91■□□□□ 0.3
UBE3B-202ENST00000342494 SBNO1A3KN83 1393 aa16.91■□□□□ 0.3
UBE3B-202ENST00000342494 ARHGEF10O15013 1369 aa16.91■□□□□ 0.3
UBE3B-202ENST00000342494 CTAGE15A4D2H0 777 aa16.91■□□□□ 0.3
UBE3B-202ENST00000342494 TAF5LO75529 589 aa16.91■□□□□ 0.3
UBE3B-202ENST00000342494 CTAGE8P0CG41 777 aa16.91■□□□□ 0.3
UBE3B-202ENST00000342494 ALDH1B1P30837 517 aa16.91■□□□□ 0.3
UBE3B-202ENST00000342494 CTAGE6Q86UF2 777 aa16.91■□□□□ 0.3
UBE3B-202ENST00000342494 CTAGE4Q8IX94 777 aa16.91■□□□□ 0.3
UBE3B-202ENST00000342494 AATFQ9NY61 560 aaKnown RBP eCLIP16.91■□□□□ 0.3
UBE3B-202ENST00000342494 IFT74Q96LB3 600 aa16.91■□□□□ 0.3
UBE3B-202ENST00000342494 SKILP12757 684 aa16.9■□□□□ 0.3
UBE3B-202ENST00000342494 EAPPQ56P03 285 aaPredicted RBP16.9■□□□□ 0.3
UBE3B-202ENST00000342494 C6orf163Q5TEZ5 329 aa16.9■□□□□ 0.3
UBE3B-202ENST00000342494 DNAJC10Q8IXB1 793 aa16.9■□□□□ 0.3
UBE3B-202ENST00000342494 GLT8D2Q9H1C3 349 aa16.9■□□□□ 0.3
UBE3B-202ENST00000342494 KRT86O43790 486 aa16.9■□□□□ 0.3
UBE3B-202ENST00000342494 DKC1O60832 514 aaKnown RBP eCLIP16.9■□□□□ 0.3
UBE3B-202ENST00000342494 SLC1A4P43007 532 aa16.9■□□□□ 0.3
UBE3B-202ENST00000342494 RAPGEF1Q13905 1077 aa16.9■□□□□ 0.3
UBE3B-202ENST00000342494 ZNF594Q96JF6 807 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms