RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 VPS53Q5VIR6 699 aa17.78■□□□□ 0.44
BRAT1-201ENST00000340611 TMX3Q96JJ7 454 aa17.78■□□□□ 0.44
BRAT1-201ENST00000340611 UPF3BQ9BZI7 483 aaKnown RBP17.78■□□□□ 0.44
BRAT1-201ENST00000340611 ZNF219Q9P2Y4 722 aaPredicted RBP17.78■□□□□ 0.44
BRAT1-201ENST00000340611 CPA1P15085 419 aa17.78■□□□□ 0.44
BRAT1-201ENST00000340611 TIGD1Q96MW7 591 aa17.78■□□□□ 0.44
BRAT1-201ENST00000340611 PARP3Q9Y6F1 533 aa17.78■□□□□ 0.44
BRAT1-201ENST00000340611 ANKRD31Q8N7Z5 1873 aa17.78■□□□□ 0.44
BRAT1-201ENST00000340611 A0A1B0GUL6 1792 aa17.78■□□□□ 0.44
BRAT1-201ENST00000340611 CAPN2P17655 700 aa17.78■□□□□ 0.44
BRAT1-201ENST00000340611 GRAPQ13588 217 aa17.78■□□□□ 0.44
BRAT1-201ENST00000340611 GRAPLQ8TC17 118 aaPredicted RBP17.78■□□□□ 0.44
BRAT1-201ENST00000340611 PRPF40BQ6NWY9 871 aaKnown RBP17.77■□□□□ 0.44
BRAT1-201ENST00000340611 A0A0G2JLW4 131 aa17.77■□□□□ 0.43
BRAT1-201ENST00000340611 WASHC4Q2M389 1173 aa17.77■□□□□ 0.43
BRAT1-201ENST00000340611 LARP6Q9BRS8 491 aaKnown RBP17.77■□□□□ 0.43
BRAT1-201ENST00000340611 M0R2C6 588 aa17.76■□□□□ 0.43
BRAT1-201ENST00000340611 CRY2Q49AN0 593 aa17.76■□□□□ 0.43
BRAT1-201ENST00000340611 SPATA5Q8NB90 893 aa17.76■□□□□ 0.43
BRAT1-201ENST00000340611 RUFY2Q8WXA3 655 aa17.76■□□□□ 0.43
BRAT1-201ENST00000340611 OSBP2Q969R2 916 aa17.76■□□□□ 0.43
BRAT1-201ENST00000340611 RAD50Q92878 1312 aa17.76■□□□□ 0.43
BRAT1-201ENST00000340611 CHRNA5P30532 468 aa17.75■□□□□ 0.43
BRAT1-201ENST00000340611 VPS37DQ86XT2 251 aa17.75■□□□□ 0.43
BRAT1-201ENST00000340611 FAM84BQ96KN1 310 aaPredicted RBP17.75■□□□□ 0.43
BRAT1-201ENST00000340611 RIOK3O14730 519 aaKnown RBP17.75■□□□□ 0.43
BRAT1-201ENST00000340611 FLAD1Q8NFF5 587 aa17.75■□□□□ 0.43
BRAT1-201ENST00000340611 TSPY26PQ9H489 355 aa17.75■□□□□ 0.43
BRAT1-201ENST00000340611 CCDC171Q6TFL3 1326 aa17.75■□□□□ 0.43
BRAT1-201ENST00000340611 MBD3O95983 291 aa17.75■□□□□ 0.43
BRAT1-201ENST00000340611 BRD2P25440 801 aaKnown RBP17.75■□□□□ 0.43
BRAT1-201ENST00000340611 ARID4AP29374 1257 aaPredicted RBP17.75■□□□□ 0.43
BRAT1-201ENST00000340611 GPSM2P81274 684 aa17.75■□□□□ 0.43
BRAT1-201ENST00000340611 PUS7LQ9H0K6 701 aaKnown RBP17.75■□□□□ 0.43
BRAT1-201ENST00000340611 CACNA1SQ13698 1873 aa17.74■□□□□ 0.43
BRAT1-201ENST00000340611 DTNBO60941 627 aa17.74■□□□□ 0.43
BRAT1-201ENST00000340611 SLFN14P0C7P3 912 aa17.74■□□□□ 0.43
BRAT1-201ENST00000340611 ZNF622Q969S3 477 aaKnown RBP eCLIP17.74■□□□□ 0.43
BRAT1-201ENST00000340611 ABCF2Q9UG63 623 aa17.74■□□□□ 0.43
BRAT1-201ENST00000340611 RBM8AQ9Y5S9 174 aaKnown RBP17.74■□□□□ 0.43
BRAT1-201ENST00000340611 ZNF804BA4D1E1 1349 aa17.74■□□□□ 0.43
BRAT1-201ENST00000340611 RNF113AO15541 343 aaKnown RBP17.74■□□□□ 0.43
BRAT1-201ENST00000340611 GADD45BO75293 160 aaPredicted RBP17.74■□□□□ 0.43
BRAT1-201ENST00000340611 GTF2F1P35269 517 aaKnown RBP eCLIP17.74■□□□□ 0.43
BRAT1-201ENST00000340611 SLC9C2Q5TAH2 1124 aa17.74■□□□□ 0.43
BRAT1-201ENST00000340611 MAST3O60307 1309 aa17.73■□□□□ 0.43
BRAT1-201ENST00000340611 CCDC66A2RUB6 948 aa17.73■□□□□ 0.43
BRAT1-201ENST00000340611 CHAF1AQ13111 956 aaPredicted RBP17.73■□□□□ 0.43
BRAT1-201ENST00000340611 ADCK5Q3MIX3 580 aa17.73■□□□□ 0.43
BRAT1-201ENST00000340611 MED23Q9ULK4 1368 aa17.73■□□□□ 0.43
BRAT1-201ENST00000340611 COL1A1P02452 1464 aaPredicted RBP17.73■□□□□ 0.43
BRAT1-201ENST00000340611 ZBTB7AO95365 584 aa17.73■□□□□ 0.43
BRAT1-201ENST00000340611 HSPA4P34932 840 aa17.73■□□□□ 0.43
BRAT1-201ENST00000340611 MCMDC2Q4G0Z9 681 aa17.73■□□□□ 0.43
BRAT1-201ENST00000340611 RBM17Q96I25 401 aaKnown RBP17.73■□□□□ 0.43
BRAT1-201ENST00000340611 SNX14Q9Y5W7 946 aa17.73■□□□□ 0.43
BRAT1-201ENST00000340611 BRD1O95696 1058 aa17.72■□□□□ 0.43
BRAT1-201ENST00000340611 CHRM1P11229 460 aaPredicted RBP17.72■□□□□ 0.43
BRAT1-201ENST00000340611 PLCB2Q00722 1185 aa17.72■□□□□ 0.43
BRAT1-201ENST00000340611 UBE4AQ14139 1066 aa17.72■□□□□ 0.43
BRAT1-201ENST00000340611 OGFRQ9NZT2 677 aa17.72■□□□□ 0.43
BRAT1-201ENST00000340611 ARAP2Q8WZ64 1704 aa17.72■□□□□ 0.43
BRAT1-201ENST00000340611 RGPD3A6NKT7 1758 aaPredicted RBP17.72■□□□□ 0.43
BRAT1-201ENST00000340611 RGPD4Q7Z3J3 1758 aa17.72■□□□□ 0.43
BRAT1-201ENST00000340611 HIP1O00291 1037 aa17.72■□□□□ 0.43
BRAT1-201ENST00000340611 SRGNP10124 158 aa17.72■□□□□ 0.43
BRAT1-201ENST00000340611 BRIP1Q9BX63 1249 aa17.72■□□□□ 0.43
BRAT1-201ENST00000340611 ZMYM1Q5SVZ6 1142 aa17.71■□□□□ 0.43
BRAT1-201ENST00000340611 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.71■□□□□ 0.43
BRAT1-201ENST00000340611 PIBF1Q8WXW3 757 aa17.71■□□□□ 0.43
BRAT1-201ENST00000340611 TCEANC2Q96MN5 208 aa17.71■□□□□ 0.43
BRAT1-201ENST00000340611 UQCRFS1P1P0C7P4 283 aa17.71■□□□□ 0.43
BRAT1-201ENST00000340611 UFL1O94874 794 aa17.71■□□□□ 0.43
BRAT1-201ENST00000340611 CAVIN4Q5BKX8 364 aa17.71■□□□□ 0.43
BRAT1-201ENST00000340611 TTLL5Q6EMB2 1281 aa17.71■□□□□ 0.43
BRAT1-201ENST00000340611 MAGEB6Q8N7X4 407 aa17.71■□□□□ 0.43
BRAT1-201ENST00000340611 TMX1Q9H3N1 280 aa17.71■□□□□ 0.43
BRAT1-201ENST00000340611 ATF5Q9Y2D1 282 aaPredicted RBP17.71■□□□□ 0.43
BRAT1-201ENST00000340611 ZNF532Q9HCE3 1301 aa17.7■□□□□ 0.42
BRAT1-201ENST00000340611 MAP4K1Q92918 833 aa17.7■□□□□ 0.42
BRAT1-201ENST00000340611 USP25Q9UHP3 1055 aa17.7■□□□□ 0.42
BRAT1-201ENST00000340611 COL11A2P13942 1736 aaPredicted RBP17.7■□□□□ 0.42
BRAT1-201ENST00000340611 MYH7P12883 1935 aa17.7■□□□□ 0.42
BRAT1-201ENST00000340611 RIMBP2O15034 1052 aa17.7■□□□□ 0.42
BRAT1-201ENST00000340611 MCCP23508 829 aa17.7■□□□□ 0.42
BRAT1-201ENST00000340611 TNNT3P45378 269 aaPredicted RBP17.69■□□□□ 0.42
BRAT1-201ENST00000340611 NAA30Q147X3 362 aaPredicted RBP17.69■□□□□ 0.42
BRAT1-201ENST00000340611 ANKRD2Q9GZV1 360 aa17.69■□□□□ 0.42
BRAT1-201ENST00000340611 POLLQ9UGP5 575 aa17.69■□□□□ 0.42
BRAT1-201ENST00000340611 C6orf229H3BNL8 230 aa17.69■□□□□ 0.42
BRAT1-201ENST00000340611 PDE6AP16499 860 aa17.69■□□□□ 0.42
BRAT1-201ENST00000340611 HIBADHP31937 336 aaKnown RBP17.69■□□□□ 0.42
BRAT1-201ENST00000340611 NECTIN1Q15223 517 aa17.69■□□□□ 0.42
BRAT1-201ENST00000340611 CREB3L3Q68CJ9 461 aa17.69■□□□□ 0.42
BRAT1-201ENST00000340611 C2CD5Q86YS7 1000 aa17.69■□□□□ 0.42
BRAT1-201ENST00000340611 MIGA1Q8NAN2 632 aa17.69■□□□□ 0.42
BRAT1-201ENST00000340611 LRP2BPQ9P2M1 347 aa17.69■□□□□ 0.42
BRAT1-201ENST00000340611 PSDA5PKW4 1024 aaPredicted RBP17.68■□□□□ 0.42
BRAT1-201ENST00000340611 PPEF1O14829 653 aaPredicted RBP17.68■□□□□ 0.42
BRAT1-201ENST00000340611 ADGRA1Q86SQ6 560 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms