RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 SPTLC3Q9NUV7 552 aa20.67■□□□□ 0.9
LRCH3-201ENST00000334859 ZNF75DP51815 510 aa20.66■□□□□ 0.9
LRCH3-201ENST00000334859 STK38Q15208 465 aa20.66■□□□□ 0.9
LRCH3-201ENST00000334859 SF3A1Q15459 793 aaKnown RBP20.66■□□□□ 0.9
LRCH3-201ENST00000334859 ZNF34Q8IZ26 560 aa20.66■□□□□ 0.9
LRCH3-201ENST00000334859 AIDAQ96BJ3 306 aa20.66■□□□□ 0.9
LRCH3-201ENST00000334859 GJB4Q9NTQ9 266 aa20.66■□□□□ 0.9
LRCH3-201ENST00000334859 RTEL1Q9NZ71 1219 aa20.66■□□□□ 0.9
LRCH3-201ENST00000334859 ANGEL1Q9UNK9 670 aaKnown RBP20.66■□□□□ 0.9
LRCH3-201ENST00000334859 MROH5Q6ZUA9 1318 aa20.66■□□□□ 0.9
LRCH3-201ENST00000334859 LRP5O75197 1615 aa20.66■□□□□ 0.9
LRCH3-201ENST00000334859 GOLGA6L19H0YKK7 550 aa20.66■□□□□ 0.9
LRCH3-201ENST00000334859 C11orf57Q6ZUT1 292 aaPredicted RBP20.66■□□□□ 0.9
LRCH3-201ENST00000334859 MRPS27Q92552 414 aaKnown RBP20.66■□□□□ 0.9
LRCH3-201ENST00000334859 PCDHA7Q9UN72 937 aa20.66■□□□□ 0.9
LRCH3-201ENST00000334859 KIAA1524Q8TCG1 905 aa20.65■□□□□ 0.9
LRCH3-201ENST00000334859 TAOK2Q9UL54 1235 aa20.65■□□□□ 0.9
LRCH3-201ENST00000334859 RBM10P98175 930 aaKnown RBP20.65■□□□□ 0.9
LRCH3-201ENST00000334859 CYB5R4Q7L1T6 521 aa20.65■□□□□ 0.9
LRCH3-201ENST00000334859 PLA2G4DQ86XP0 818 aa20.65■□□□□ 0.9
LRCH3-201ENST00000334859 ENGASEQ8NFI3 743 aa20.65■□□□□ 0.9
LRCH3-201ENST00000334859 CLIC4Q9Y696 253 aa20.65■□□□□ 0.9
LRCH3-201ENST00000334859 SLC5A1P13866 664 aa20.64■□□□□ 0.89
LRCH3-201ENST00000334859 METAP2P50579 478 aaKnown RBP eCLIP20.64■□□□□ 0.89
LRCH3-201ENST00000334859 SLIT2O94813 1529 aa20.64■□□□□ 0.89
LRCH3-201ENST00000334859 ZMYM6O95789 1325 aa20.64■□□□□ 0.89
LRCH3-201ENST00000334859 B4E1Z4 1266 aa20.64■□□□□ 0.89
LRCH3-201ENST00000334859 RXRAP19793 462 aa20.64■□□□□ 0.89
LRCH3-201ENST00000334859 CCDC186Q7Z3E2 898 aa20.64■□□□□ 0.89
LRCH3-201ENST00000334859 BRAPQ7Z569 592 aa20.64■□□□□ 0.89
LRCH3-201ENST00000334859 SPATA5Q8NB90 893 aa20.64■□□□□ 0.89
LRCH3-201ENST00000334859 MPHOSPH8Q99549 860 aa20.64■□□□□ 0.89
LRCH3-201ENST00000334859 FAM13BQ9NYF5 915 aa20.64■□□□□ 0.89
LRCH3-201ENST00000334859 C4AP0C0L4 1744 aa20.63■□□□□ 0.89
LRCH3-201ENST00000334859 C4BP0C0L5 1744 aa20.63■□□□□ 0.89
LRCH3-201ENST00000334859 A0A087WWV3 80 aa20.63■□□□□ 0.89
LRCH3-201ENST00000334859 A0A1B0GVL5 298 aa20.63■□□□□ 0.89
LRCH3-201ENST00000334859 KDM4FA0A1W2PPD8 638 aa20.63■□□□□ 0.89
LRCH3-201ENST00000334859 SNAP23O00161 211 aa20.63■□□□□ 0.89
LRCH3-201ENST00000334859 MYSM1Q5VVJ2 828 aa20.63■□□□□ 0.89
LRCH3-201ENST00000334859 LINC00301Q8NCQ3 95 aa20.63■□□□□ 0.89
LRCH3-201ENST00000334859 NKX2-3Q8TAU0 364 aa20.63■□□□□ 0.89
LRCH3-201ENST00000334859 KCNG4Q8TDN1 519 aa20.63■□□□□ 0.89
LRCH3-201ENST00000334859 COL16A1Q07092 1604 aaPredicted RBP20.63■□□□□ 0.89
LRCH3-201ENST00000334859 ARAP2Q8WZ64 1704 aa20.62■□□□□ 0.89
LRCH3-201ENST00000334859 TCRBV5S4A2TA0A5A2 114 aa20.62■□□□□ 0.89
LRCH3-201ENST00000334859 SH2B2O14492 632 aaPredicted RBP20.62■□□□□ 0.89
LRCH3-201ENST00000334859 FGFR2P21802 821 aa20.62■□□□□ 0.89
LRCH3-201ENST00000334859 RASGRF1Q13972 1273 aa20.62■□□□□ 0.89
LRCH3-201ENST00000334859 SUSD4Q5VX71 490 aa20.62■□□□□ 0.89
LRCH3-201ENST00000334859 ADALQ6DHV7 355 aa20.62■□□□□ 0.89
LRCH3-201ENST00000334859 SYNE3Q6ZMZ3 975 aa20.62■□□□□ 0.89
LRCH3-201ENST00000334859 MICU3Q86XE3 530 aa20.62■□□□□ 0.89
LRCH3-201ENST00000334859 ERCC4Q92889 916 aaPredicted RBP20.62■□□□□ 0.89
LRCH3-201ENST00000334859 SDF4Q9BRK5 362 aa20.62■□□□□ 0.89
LRCH3-201ENST00000334859 NEDD4P46934 1319 aa20.62■□□□□ 0.89
LRCH3-201ENST00000334859 WNK3Q9BYP7 1800 aa20.62■□□□□ 0.89
LRCH3-201ENST00000334859 BECN2A8MW95 431 aa20.62■□□□□ 0.89
LRCH3-201ENST00000334859 KIF28PB7ZC32 967 aa20.62■□□□□ 0.89
LRCH3-201ENST00000334859 DYNC1I1O14576 645 aa20.62■□□□□ 0.89
LRCH3-201ENST00000334859 IQCB1Q15051 598 aa20.62■□□□□ 0.89
LRCH3-201ENST00000334859 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.62■□□□□ 0.89
LRCH3-201ENST00000334859 MAGEB6Q8N7X4 407 aa20.62■□□□□ 0.89
LRCH3-201ENST00000334859 FBXW7Q969H0 707 aa20.62■□□□□ 0.89
LRCH3-201ENST00000334859 STRBPQ96SI9 672 aaKnown RBP20.62■□□□□ 0.89
LRCH3-201ENST00000334859 CCDC87Q9NVE4 849 aa20.62■□□□□ 0.89
LRCH3-201ENST00000334859 POLR3EQ9NVU0 708 aa20.62■□□□□ 0.89
LRCH3-201ENST00000334859 CLIP2Q9UDT6 1046 aa20.62■□□□□ 0.89
LRCH3-201ENST00000334859 MBD4O95243 580 aa20.61■□□□□ 0.89
LRCH3-201ENST00000334859 EIF5P55010 431 aaKnown RBP20.61■□□□□ 0.89
LRCH3-201ENST00000334859 NFXL1Q6ZNB6 911 aa20.61■□□□□ 0.89
LRCH3-201ENST00000334859 CCDC144CPQ8IYA2 1237 aa20.61■□□□□ 0.89
LRCH3-201ENST00000334859 FMR1NBQ8N0W7 255 aaPredicted RBP20.61■□□□□ 0.89
LRCH3-201ENST00000334859 AK7Q96M32 723 aa20.61■□□□□ 0.89
LRCH3-201ENST00000334859 SEC31BQ9NQW1 1179 aa20.61■□□□□ 0.89
LRCH3-201ENST00000334859 ANO10Q9NW15 660 aa20.61■□□□□ 0.89
LRCH3-201ENST00000334859 NRBP1Q9UHY1 535 aa20.61■□□□□ 0.89
LRCH3-201ENST00000334859 SPTLC2O15270 562 aa20.61■□□□□ 0.89
LRCH3-201ENST00000334859 CDKL5O76039 1030 aa20.61■□□□□ 0.89
LRCH3-201ENST00000334859 YEATS4O95619 227 aa20.61■□□□□ 0.89
LRCH3-201ENST00000334859 NDUFA8P51970 172 aa20.61■□□□□ 0.89
LRCH3-201ENST00000334859 KIF23Q02241 960 aaPredicted RBP20.61■□□□□ 0.89
LRCH3-201ENST00000334859 MAP3K12Q12852 859 aa20.61■□□□□ 0.89
LRCH3-201ENST00000334859 APOA5Q6Q788 366 aa20.61■□□□□ 0.89
LRCH3-201ENST00000334859 UTP14AQ9BVJ6 771 aaKnown RBP20.61■□□□□ 0.89
LRCH3-201ENST00000334859 A0A1W2PQ27 194 aa20.6■□□□□ 0.89
LRCH3-201ENST00000334859 A0A1W2PQ64 194 aa20.6■□□□□ 0.89
LRCH3-201ENST00000334859 A0A1W2PQD8 194 aa20.6■□□□□ 0.89
LRCH3-201ENST00000334859 ATP6V1AP38606 617 aa20.6■□□□□ 0.89
LRCH3-201ENST00000334859 CRKLP46109 303 aaKnown RBP20.6■□□□□ 0.89
LRCH3-201ENST00000334859 ACSBG1Q96GR2 724 aa20.6■□□□□ 0.89
LRCH3-201ENST00000334859 PRIMPOLQ96LW4 560 aa20.6■□□□□ 0.89
LRCH3-201ENST00000334859 AIFM3Q96NN9 605 aa20.6■□□□□ 0.89
LRCH3-201ENST00000334859 ALG1Q9BT22 464 aa20.6■□□□□ 0.89
LRCH3-201ENST00000334859 NAPBQ9H115 298 aa20.6■□□□□ 0.89
LRCH3-201ENST00000334859 SENP2Q9HC62 589 aa20.6■□□□□ 0.89
LRCH3-201ENST00000334859 LRMPQ12912 555 aa20.6■□□□□ 0.89
LRCH3-201ENST00000334859 CPLX2Q6PUV4 134 aaKnown RBP20.6■□□□□ 0.89
LRCH3-201ENST00000334859 CEP57L1Q8IYX8 460 aa20.6■□□□□ 0.89
LRCH3-201ENST00000334859 INTS5Q6P9B9 1019 aaKnown RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms